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The map label for this gene is ybgG

Identifier: 30062105

GI number: 30062105

Start: 582720

End: 585353

Strand: Reverse

Name: ybgG

Synonym: S0578

Alternate gene names: 30062105

Gene position: 585353-582720 (Counterclockwise)

Preceding gene: 30062106

Following gene: 30062104

Centisome position: 12.73

GC content: 49.47

Gene sequence:

>2634_bases
ATGAAAGCGGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGGGAGTGGTATTTCACCACCGAAGAGTCACG
CATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACAGGACAACGAATACAAATATTACGTACTCGACG
GGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGACCGCTTGAAGAAACTGGTAGAAGCCGGC
AAGTTGATTATCGGCCCCTGGTATACCCAGACCGATACCACGATTGTTTCTGCGGAATCCATCGTCCGTAATCTGATGTA
CGGAATGCGTGACTGCCTCGCGTTTGGCGAGCCGATGAAAATAGGTTATTTACCCGATTCCTTTGGCATGTCCGGGCAAC
TGCCGCATATCTACAATGGATTTGGCATTACCTGCACCATGTTCTGGCGTGGATGTTCTGAGCGCCACGGTACGGATAAA
ACCGAGTTTTTGTGGCAAAGCAGTGACGGTAGCGAAGTGACGGCGCAGGTGATGCCGTTGGGTTATGCCATCGGTAAGTA
CTTACCTGCGGACGAAAACGGATTACGCAAACGCCTCGACAGTTATTTTGACGTGCTGGAAAAAGCGTCTGTAACCAAAG
AGATTTTGCTGCCGAATGGGCATGATCAGATGCCATTGCAGCAAAATATCTTCGAAGTGATGGAGAAACTGCGCGAAATT
TATCCTCAACGAAAGTTTGTGATGAGCCGCTTTGAAGAGGTATTTGAGAAGATCGAAGCGCAGCGAGATAATCTGGCAAC
CCTGAAAGGGGAATTTATTGATGGCAAATATATGCGCGTGCATCGCACCATCGGTTCCACGCGCATGGATATCAAAGTTG
CCCACGCACGTATTGAAAATAAGATTGTTAATCTGCTGGAACCGCTGGCAACGCTGGCCAGGACGTTGGGTTTTGGATAC
CACCACGGCTTGCTGGAGAAAATGTGGAAAGAGATCTTAAAAAATCATGCCCACGACAGCATCGGCTGCTGCTGTCGTGA
CAAAGTTCATCGCGAAATCGTCGCCCGCTTCGAACTGGCTGAAGACATGGCGGATAATCTGCTGCGTTTCTATATGCGTA
AAATCGCCGACAACATGCCGCAGAGCGACGCCGACAAACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGGGAAGAAGTG
ATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATCTACGAGACGATCGCGGTCAGCCTGTACCGTATTTTATTCG
CCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTAATTACGATCCCTTTATGGAGTTTG
ATATACAGATCAACCAGATTGTCCCTTCTATGGGCTATCGCACGCTTTATATCGAAGCGAATCAGCCTGGCAACGTGATT
GCGGCAAAAAGTGACGCTGAAGGGATACTGGAAAATGCTTTCTGGCAAATTGCGCTCAATGAGGATGGAACGCTACAACT
GGTAGATAAAGATAGCGGTGTGCGCTATGACCGGGTGTTGCAAATTGAAGAAAGCTCTGATGATGGTGATGAATATGACT
ATTCACCCGCAAAAGAAGAGTGGGTAATTACTTCGGCGAATGCGAAACCGCAATGCGAGATTATTCATGAGGCCTGGCAG
AGCAGGGCTGTTATCCGCTATGAAATGGCGGTGCCGCGTAATCTGCAACAACGCAGCGCAAGACAATCCACTGGCAGAGT
AGATGTCGAGTTGGTTGTCACTCTTAGTCATAACAACAGGCGCATTGATGTGGATATCAACCTTGATAACCAGGCTGACG
ATCATCGCCTTCGCGTCCTGATCCCTACATCTTTTAACACCGATAGTGTTCTGGCAGATACCCAGTTTGGTTCGCTAACG
CGCCCCGTGAACGACAGTGCAATGAACAACTGGCAGCAAGAAAGCTGGAAAGAAGCGCCGGTTCCGGTATGGAATATGCT
CAACTATGCAGCCTTACAGGAAGGGCGTAACGGCATGGCTGTCTTTAGCGAAGGGCTACGTGAATTTGAAGTCATCGGTG
AAGAGAAGAAAACCTTTGCCATTACGTTGCTGCGCGGCGTGGGCTTACTGGGGAAAGAAGATCTGCTTTTAAGGCCTAGG
CGGCCTTCGGGAATTAAAATGCCAGTCCCGGACTCACAACTACGTGGTCTGCTTTCTTGTCGCCTAAGTTTATTGAGTTA
TACCGGTACGCCAACCGCCGCTGGTGTAGCTCAGCAGGCGCGAGCATGGCTGACTCCAGTACAGTGTTACAACAAAATCC
CATGGGATGCGATGAAGCTCAACAAAGCCGGATTCAACGTGCCGGAAAGTTATAGTTTGTTGAAAATGCCCCCAGTGGGA
TGCCTGATAAGCGCACTTAAGAAAGCTGAAGACCGACAAGAAGTGATTTTACGGCTGTTTAATCCGGCTGAATCAGCAAC
CTGTGATGCGACTGTTGCTTTCAGTCGCGAGGTGATTTCTTGCTCAGAAACGATGATGGATGAACACATTACCACCGAGG
AAAATCAAGGTTCAAATCTATCGGGGCCTTTTTTACCCGGCCAGTCACGGACGTTCAGTTACCGGCTTGCCTGA

Upstream 100 bases:

>100_bases
CAATCTCGACTGCAATTCTCCTGATCTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCA
TAAACAAAAAGGAAACGACG

Downstream 100 bases:

>100_bases
ATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACAAAGGGCGCTTTGTTCATGCCGGATACGGCATGAA
CGCTTTATTCGGTCTACAAA

Product: alpha-mannosidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 877; Mature: 877

Protein sequence:

>877_residues
MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQDNEYKYYVLDGQTAILEDYFAVKPENKDRLKKLVEAG
KLIIGPWYTQTDTTIVSAESIVRNLMYGMRDCLAFGEPMKIGYLPDSFGMSGQLPHIYNGFGITCTMFWRGCSERHGTDK
TEFLWQSSDGSEVTAQVMPLGYAIGKYLPADENGLRKRLDSYFDVLEKASVTKEILLPNGHDQMPLQQNIFEVMEKLREI
YPQRKFVMSRFEEVFEKIEAQRDNLATLKGEFIDGKYMRVHRTIGSTRMDIKVAHARIENKIVNLLEPLATLARTLGFGY
HHGLLEKMWKEILKNHAHDSIGCCCRDKVHREIVARFELAEDMADNLLRFYMRKIADNMPQSDADKLVLFNLMPWPREEV
INTTVRLRASQFNLRDDRGQPVPYFIRHAREIDPGLIDRQIVHYGNYDPFMEFDIQINQIVPSMGYRTLYIEANQPGNVI
AAKSDAEGILENAFWQIALNEDGTLQLVDKDSGVRYDRVLQIEESSDDGDEYDYSPAKEEWVITSANAKPQCEIIHEAWQ
SRAVIRYEMAVPRNLQQRSARQSTGRVDVELVVTLSHNNRRIDVDINLDNQADDHRLRVLIPTSFNTDSVLADTQFGSLT
RPVNDSAMNNWQQESWKEAPVPVWNMLNYAALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRPR
RPSGIKMPVPDSQLRGLLSCRLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDAMKLNKAGFNVPESYSLLKMPPVG
CLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVISCSETMMDEHITTEENQGSNLSGPFLPGQSRTFSYRLA

Sequences:

>Translated_877_residues
MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQDNEYKYYVLDGQTAILEDYFAVKPENKDRLKKLVEAG
KLIIGPWYTQTDTTIVSAESIVRNLMYGMRDCLAFGEPMKIGYLPDSFGMSGQLPHIYNGFGITCTMFWRGCSERHGTDK
TEFLWQSSDGSEVTAQVMPLGYAIGKYLPADENGLRKRLDSYFDVLEKASVTKEILLPNGHDQMPLQQNIFEVMEKLREI
YPQRKFVMSRFEEVFEKIEAQRDNLATLKGEFIDGKYMRVHRTIGSTRMDIKVAHARIENKIVNLLEPLATLARTLGFGY
HHGLLEKMWKEILKNHAHDSIGCCCRDKVHREIVARFELAEDMADNLLRFYMRKIADNMPQSDADKLVLFNLMPWPREEV
INTTVRLRASQFNLRDDRGQPVPYFIRHAREIDPGLIDRQIVHYGNYDPFMEFDIQINQIVPSMGYRTLYIEANQPGNVI
AAKSDAEGILENAFWQIALNEDGTLQLVDKDSGVRYDRVLQIEESSDDGDEYDYSPAKEEWVITSANAKPQCEIIHEAWQ
SRAVIRYEMAVPRNLQQRSARQSTGRVDVELVVTLSHNNRRIDVDINLDNQADDHRLRVLIPTSFNTDSVLADTQFGSLT
RPVNDSAMNNWQQESWKEAPVPVWNMLNYAALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRPR
RPSGIKMPVPDSQLRGLLSCRLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDAMKLNKAGFNVPESYSLLKMPPVG
CLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVISCSETMMDEHITTEENQGSNLSGPFLPGQSRTFSYRLA
>Mature_877_residues
MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQDNEYKYYVLDGQTAILEDYFAVKPENKDRLKKLVEAG
KLIIGPWYTQTDTTIVSAESIVRNLMYGMRDCLAFGEPMKIGYLPDSFGMSGQLPHIYNGFGITCTMFWRGCSERHGTDK
TEFLWQSSDGSEVTAQVMPLGYAIGKYLPADENGLRKRLDSYFDVLEKASVTKEILLPNGHDQMPLQQNIFEVMEKLREI
YPQRKFVMSRFEEVFEKIEAQRDNLATLKGEFIDGKYMRVHRTIGSTRMDIKVAHARIENKIVNLLEPLATLARTLGFGY
HHGLLEKMWKEILKNHAHDSIGCCCRDKVHREIVARFELAEDMADNLLRFYMRKIADNMPQSDADKLVLFNLMPWPREEV
INTTVRLRASQFNLRDDRGQPVPYFIRHAREIDPGLIDRQIVHYGNYDPFMEFDIQINQIVPSMGYRTLYIEANQPGNVI
AAKSDAEGILENAFWQIALNEDGTLQLVDKDSGVRYDRVLQIEESSDDGDEYDYSPAKEEWVITSANAKPQCEIIHEAWQ
SRAVIRYEMAVPRNLQQRSARQSTGRVDVELVVTLSHNNRRIDVDINLDNQADDHRLRVLIPTSFNTDSVLADTQFGSLT
RPVNDSAMNNWQQESWKEAPVPVWNMLNYAALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRPR
RPSGIKMPVPDSQLRGLLSCRLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDAMKLNKAGFNVPESYSLLKMPPVG
CLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVISCSETMMDEHITTEENQGSNLSGPFLPGQSRTFSYRLA

Specific function: May hydrolyze mannosyl-D-glycerate to mannose-6- phosphate and glycerate [H]

COG id: COG0383

COG function: function code G; Alpha-mannosidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 38 family [H]

Homologues:

Organism=Homo sapiens, GI46852164, Length=410, Percent_Identity=24.1463414634146, Blast_Score=86, Evalue=1e-16,
Organism=Escherichia coli, GI1786952, Length=877, Percent_Identity=97.0353477765108, Blast_Score=1759, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6321282, Length=444, Percent_Identity=24.3243243243243, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011013
- InterPro:   IPR011330
- InterPro:   IPR011682
- InterPro:   IPR015341
- InterPro:   IPR000602 [H]

Pfam domain/function: PF09261 Alpha-mann_mid; PF01074 Glyco_hydro_38; PF07748 Glyco_hydro_38C [H]

EC number: NA

Molecular weight: Translated: 100281; Mature: 100281

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQDNEYKYYVLDGQTAILE
CCCCCEEEECCCCCCCCEEEEECCCCEEEEECCHHHHHHHHCCCCCEEEEEECCCCHHHH
DYFAVKPENKDRLKKLVEAGKLIIGPWYTQTDTTIVSAESIVRNLMYGMRDCLAFGEPMK
HHHCCCCCCHHHHHHHHHCCCEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCE
IGYLPDSFGMSGQLPHIYNGFGITCTMFWRGCSERHGTDKTEFLWQSSDGSEVTAQVMPL
EECCCCCCCCCCCCCCEECCCCEEEEEEECCCCCCCCCCCHHEEEECCCCCEEEEEHHHH
GYAIGKYLPADENGLRKRLDSYFDVLEKASVTKEILLPNGHDQMPLQQNIFEVMEKLREI
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
YPQRKFVMSRFEEVFEKIEAQRDNLATLKGEFIDGKYMRVHRTIGSTRMDIKVAHARIEN
CCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEEEHHCCCEEEEEHHHHHHHH
KIVNLLEPLATLARTLGFGYHHGLLEKMWKEILKNHAHDSIGCCCRDKVHREIVARFELA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
EDMADNLLRFYMRKIADNMPQSDADKLVLFNLMPWPREEVINTTVRLRASQFNLRDDRGQ
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHCHHHEEEEHHCCCCCCCCC
PVPYFIRHAREIDPGLIDRQIVHYGNYDPFMEFDIQINQIVPSMGYRTLYIEANQPGNVI
CCHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEEEEEEEHHCCCCCCEEEEEEECCCCCEE
AAKSDAEGILENAFWQIALNEDGTLQLVDKDSGVRYDRVLQIEESSDDGDEYDYSPAKEE
EECCCHHHHHCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCC
WVITSANAKPQCEIIHEAWQSRAVIRYEMAVPRNLQQRSARQSTGRVDVELVVTLSHNNR
EEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEEEEEECCCE
RIDVDINLDNQADDHRLRVLIPTSFNTDSVLADTQFGSLTRPVNDSAMNNWQQESWKEAP
EEEEEEECCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCHHHHHCCHHHHHCCCC
VPVWNMLNYAALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRPR
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCCEECCC
RPSGIKMPVPDSQLRGLLSCRLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDAMKL
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCHHEE
NKAGFNVPESYSLLKMPPVGCLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVIS
CCCCCCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEHHHHHHHHH
CSETMMDEHITTEENQGSNLSGPFLPGQSRTFSYRLA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQDNEYKYYVLDGQTAILE
CCCCCEEEECCCCCCCCEEEEECCCCEEEEECCHHHHHHHHCCCCCEEEEEECCCCHHHH
DYFAVKPENKDRLKKLVEAGKLIIGPWYTQTDTTIVSAESIVRNLMYGMRDCLAFGEPMK
HHHCCCCCCHHHHHHHHHCCCEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCE
IGYLPDSFGMSGQLPHIYNGFGITCTMFWRGCSERHGTDKTEFLWQSSDGSEVTAQVMPL
EECCCCCCCCCCCCCCEECCCCEEEEEEECCCCCCCCCCCHHEEEECCCCCEEEEEHHHH
GYAIGKYLPADENGLRKRLDSYFDVLEKASVTKEILLPNGHDQMPLQQNIFEVMEKLREI
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
YPQRKFVMSRFEEVFEKIEAQRDNLATLKGEFIDGKYMRVHRTIGSTRMDIKVAHARIEN
CCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEEEHHCCCEEEEEHHHHHHHH
KIVNLLEPLATLARTLGFGYHHGLLEKMWKEILKNHAHDSIGCCCRDKVHREIVARFELA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
EDMADNLLRFYMRKIADNMPQSDADKLVLFNLMPWPREEVINTTVRLRASQFNLRDDRGQ
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHCHHHEEEEHHCCCCCCCCC
PVPYFIRHAREIDPGLIDRQIVHYGNYDPFMEFDIQINQIVPSMGYRTLYIEANQPGNVI
CCHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEEEEEEEHHCCCCCCEEEEEEECCCCCEE
AAKSDAEGILENAFWQIALNEDGTLQLVDKDSGVRYDRVLQIEESSDDGDEYDYSPAKEE
EECCCHHHHHCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCC
WVITSANAKPQCEIIHEAWQSRAVIRYEMAVPRNLQQRSARQSTGRVDVELVVTLSHNNR
EEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEEEEEECCCE
RIDVDINLDNQADDHRLRVLIPTSFNTDSVLADTQFGSLTRPVNDSAMNNWQQESWKEAP
EEEEEEECCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCHHHHHCCHHHHHCCCC
VPVWNMLNYAALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRPR
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCCEECCC
RPSGIKMPVPDSQLRGLLSCRLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDAMKL
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCHHEE
NKAGFNVPESYSLLKMPPVGCLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVIS
CCCCCCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEHHHHHHHHH
CSETMMDEHITTEENQGSNLSGPFLPGQSRTFSYRLA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 9063979 [H]