Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is gloB
Identifier: 30061764
GI number: 30061764
Start: 226058
End: 226813
Strand: Reverse
Name: gloB
Synonym: S0206
Alternate gene names: 30061764
Gene position: 226813-226058 (Counterclockwise)
Preceding gene: 30061766
Following gene: 30061763
Centisome position: 4.93
GC content: 39.95
Gene sequence:
>756_bases ATGAATCTTAACAGTATTCCCGCCTTTGATGACAATTACATCTGGGTTTTGAATGATGAGGCAGGTCGCTGCCTGATTGT CGATCCCGGAGACGCAGAGCCAGTATTAAACGCCATTACCGCCAATAACTGGCAACCGGAGGCCATATTTCTAACCCACC ATCACCACGATCACGTTGGCGGCGTAAAAGAACTGGTGGAAAAGTTTCCGCAAATTGTAGTGTATGGTCCACAAGAGACA CAAGATAAGGGAACAACACAGGTAGTCAAAGATGGCGAAACTGCCTTCGTTTTAGGGCATGAATTTAGTGTAATTACCAC ACCGGGTCACACTTTAGGACATATCTGTTACTTCAGTAAACCTTATCTATTTTGCGGCGACACGCTGTTTTCTGGTGGGT GTGGTCGGTTGTTTGAAGGGACAGCTTTACAAATGTATCAATCACTTAAAAAGCTAAGTGCGTTACCTGACGATACATTG GTATGTTGTGCTCATGAATATACGTTATCAAATATGAAGTTTGCTTTGAGTATTTTTCCGCACGATTTGTCCATAAATGA TTATTATCGTAAAGTTAAGGAGTTACGGGCAAAAAATCAAATAACACTACCCGTAATTCTGAAAAATGAGCGGCAAATTA ATGTTTTTTTAAGAACGGAAGATATTGATTTAATTAATGGAATTAATGAAGAAACATTATTGCAACAACCTGAAGAGCGT TTTGCATGGTTAAGGTCAAAGAAAGATAGGTTCTGA
Upstream 100 bases:
>100_bases CTCCCCAGGGCAAATCGCCCCAGCAATCAGGAGCCACGACAGTTTGAGGGACTCTTGCCGGTTTCATCACAACCTTCCGT TTTACACTGAGAGGTAATCT
Downstream 100 bases:
>100_bases TAAAACTTTCTTGTCATCGGCTCCGTTCGCCGTTATGATCGGTCGTCTTTTAAGCAACTATTGACACACACATGAAGGCA AAAGCGATATTACTCGCCTC
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQET QDKGTTQVVKDGETAFVLGHEFSVITTPGHTLGHICYFSKPYLFCGDTLFSGGCGRLFEGTALQMYQSLKKLSALPDDTL VCCAHEYTLSNMKFALSIFPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLRTEDIDLINGINEETLLQQPEER FAWLRSKKDRF
Sequences:
>Translated_251_residues MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQET QDKGTTQVVKDGETAFVLGHEFSVITTPGHTLGHICYFSKPYLFCGDTLFSGGCGRLFEGTALQMYQSLKKLSALPDDTL VCCAHEYTLSNMKFALSIFPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLRTEDIDLINGINEETLLQQPEER FAWLRSKKDRF >Mature_251_residues MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQET QDKGTTQVVKDGETAFVLGHEFSVITTPGHTLGHICYFSKPYLFCGDTLFSGGCGRLFEGTALQMYQSLKKLSALPDDTL VCCAHEYTLSNMKFALSIFPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLRTEDIDLINGINEETLLQQPEER FAWLRSKKDRF
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538322, Length=260, Percent_Identity=34.2307692307692, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI94538320, Length=260, Percent_Identity=34.2307692307692, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI14150041, Length=229, Percent_Identity=35.3711790393013, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI116642887, Length=227, Percent_Identity=35.6828193832599, Blast_Score=125, Evalue=3e-29, Organism=Homo sapiens, GI21703352, Length=232, Percent_Identity=34.9137931034483, Blast_Score=125, Evalue=4e-29, Organism=Homo sapiens, GI46361987, Length=198, Percent_Identity=37.3737373737374, Blast_Score=121, Evalue=6e-28, Organism=Escherichia coli, GI1786406, Length=251, Percent_Identity=98.00796812749, Blast_Score=515, Evalue=1e-148, Organism=Escherichia coli, GI1787158, Length=193, Percent_Identity=30.0518134715026, Blast_Score=69, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17536925, Length=227, Percent_Identity=32.5991189427313, Blast_Score=121, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6320478, Length=231, Percent_Identity=33.7662337662338, Blast_Score=100, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6324614, Length=231, Percent_Identity=29.8701298701299, Blast_Score=84, Evalue=3e-17, Organism=Drosophila melanogaster, GI21356335, Length=261, Percent_Identity=35.632183908046, Blast_Score=151, Evalue=4e-37, Organism=Drosophila melanogaster, GI24667703, Length=261, Percent_Identity=35.632183908046, Blast_Score=151, Evalue=4e-37, Organism=Drosophila melanogaster, GI24667711, Length=261, Percent_Identity=35.632183908046, Blast_Score=151, Evalue=5e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 28513; Mature: 28513
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVG CCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCC GVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVITTPGHTLGHICYFSK HHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCEEEEEECCEEEEECCCCHHEEEEEECC PYLFCGDTLFSGGCGRLFEGTALQMYQSLKKLSALPDDTLVCCAHEYTLSNMKFALSIFP CEEEECCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECC HDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLRTEDIDLINGINEETLLQQPEER CCCCHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEECCCHHHCCCCHHHHHCCHHHH FAWLRSKKDRF HHHHHHCCCCC >Mature Secondary Structure MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVG CCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCC GVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVITTPGHTLGHICYFSK HHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCEEEEEECCEEEEECCCCHHEEEEEECC PYLFCGDTLFSGGCGRLFEGTALQMYQSLKKLSALPDDTLVCCAHEYTLSNMKFALSIFP CEEEECCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECC HDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLRTEDIDLINGINEETLLQQPEER CCCCHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEECCCHHHCCCCHHHHHCCHHHH FAWLRSKKDRF HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA