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The map label for this gene is xynT

Identifier: 30024047

GI number: 30024047

Start: 1544942

End: 1546426

Strand: Reverse

Name: xynT

Synonym: L0233

Alternate gene names: 30024047

Gene position: 1546426-1544942 (Counterclockwise)

Preceding gene: 15673489

Following gene: 15673487

Centisome position: 65.37

GC content: 37.58

Gene sequence:

>1485_bases
ATGTACTCAAAAATGAGTAATGAAATCAAACAAGTTCAACATGATGAATATCATGAATTAACGCTTGGAGAACGTATTGG
TTATGGAATGGGGGATTTTGCACAAAACCTTGTCTTTGGGACTGTTGGTGGCTTTTTAGCACTTTATATGACAACAGTCA
ATGCGATTGGAACTGCAACAGCCGGTTTTATTTTTCTGTTCGTCCGAATTATTAATGTATTTTGGGACCCAATGGTTGGG
ACTTTTGTTGATAAAAGAACATCAAAAGCAGGAAAATATCGTCCTTGGCTTTTAAGAGCAGGTATACCTCTGGTAATTTT
AGCCGCCTTACTTTTTGCACCTCTACCAGGTGTTAAAGGGTCTGTTCCCTTTGCTTTTATCGTTTATTTTGCCTTAGACT
TAGTATATTCAGTTGTTAATATTCCTTATGGTTCACTTAATGCATCATTAACTCGTAATCCGGAATCCGTTGATAAGCTG
ACAAGTACACGGATGATGTTGGCAAATGGAGCCAATCTCCTAGTCTATACCCTCTTTCCAATGTTTGTCCAAATGGCAGC
ACCGAAAGGAAGAAGTCTTAAAGATACTGGATTATTTGGCCTTAAACTTCATATGGGGAATTATACTGACCCTTCAGCGG
GACATGCTTGGTTTGGAGTTTACTCAGTTTATATGATTATTGGTGCAATAGCTTTATTCCTATGTTATAAATTGACCAAA
GAACGTGTGGTTGCAACAGCAGAACAATCGGCAGAAGTTAAAACAACTGACCTCTTCCTTGAATTAAAGAACAATCGTCC
ACTTGTGATTCTAGGGATTTTCTTCATGTTAGCTTTTACTTTCATGTTTTTTATGAATACTGTAAATGGTTTCTTTAATC
AATTTGTTGTTGGACATTCAGAATGGATGGGAGACATTGGCCTCATTGCTTCAATTCCAGGAATTGTTTTCCCAATCTTT
TGGCCTCGTTTAAAGAAAATTTTCGGTAAAAAAGGTTTCTTTCATCTTTTTATCGGAATGTTCATTGTTGGAGAAATTTT
GACATATATTTGGTCCCTTAATGGAATGCATGATGCCCTCTGGTTAGCTTATGTTGCAACCTTTATTAAACAATGGGGCT
TAACTTCAGCAACAGGGTTCATGTGGGCATTAGTTCCTGAAGTTGTCGCTTATGGAGAACTCAAATCGGGTAAAAGTAAT
GCTGCGATTATTAACGCAATCATGGGACTTTTCTTCAAAATTGGTTTTACATTAGGTGGAGCAATTCCACTTTGGTTCTT
AGCAGCTTATGGTTTCAATGAGACAGCAGCACATCAACATGCTAACGCCCTAGCCGGTATAAATCTCACAGCAATTTGGA
TTCCAGCCGTTCTTGCTCTTGTATCAATGATTATTATGCAACTCTATCCAATTTCTGATAAAGATGTAGCAGAGATTAAT
CAACAGCTTGATGAAAAACGTGCTCAACTTAAGGAAGCGGAATAA

Upstream 100 bases:

>100_bases
GTCAAAAAAAGACTTTTATAACAGAATATCTATTTACAACGAATTAAAATTTACTGACAGACTCATCAGTAAAAATAATT
TTAATAAAATAATAGGAGGG

Downstream 100 bases:

>100_bases
TTTATATTAAAAGGAGACAAAATCATGTCACTTATTCAAAACCCAATTCTTCCCGGGTTTAATGCAGACCCAAGCATTAT
TCGCGTAGAAGATACTTATT

Product: xyloside transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MYSKMSNEIKQVQHDEYHELTLGERIGYGMGDFAQNLVFGTVGGFLALYMTTVNAIGTATAGFIFLFVRIINVFWDPMVG
TFVDKRTSKAGKYRPWLLRAGIPLVILAALLFAPLPGVKGSVPFAFIVYFALDLVYSVVNIPYGSLNASLTRNPESVDKL
TSTRMMLANGANLLVYTLFPMFVQMAAPKGRSLKDTGLFGLKLHMGNYTDPSAGHAWFGVYSVYMIIGAIALFLCYKLTK
ERVVATAEQSAEVKTTDLFLELKNNRPLVILGIFFMLAFTFMFFMNTVNGFFNQFVVGHSEWMGDIGLIASIPGIVFPIF
WPRLKKIFGKKGFFHLFIGMFIVGEILTYIWSLNGMHDALWLAYVATFIKQWGLTSATGFMWALVPEVVAYGELKSGKSN
AAIINAIMGLFFKIGFTLGGAIPLWFLAAYGFNETAAHQHANALAGINLTAIWIPAVLALVSMIIMQLYPISDKDVAEIN
QQLDEKRAQLKEAE

Sequences:

>Translated_494_residues
MYSKMSNEIKQVQHDEYHELTLGERIGYGMGDFAQNLVFGTVGGFLALYMTTVNAIGTATAGFIFLFVRIINVFWDPMVG
TFVDKRTSKAGKYRPWLLRAGIPLVILAALLFAPLPGVKGSVPFAFIVYFALDLVYSVVNIPYGSLNASLTRNPESVDKL
TSTRMMLANGANLLVYTLFPMFVQMAAPKGRSLKDTGLFGLKLHMGNYTDPSAGHAWFGVYSVYMIIGAIALFLCYKLTK
ERVVATAEQSAEVKTTDLFLELKNNRPLVILGIFFMLAFTFMFFMNTVNGFFNQFVVGHSEWMGDIGLIASIPGIVFPIF
WPRLKKIFGKKGFFHLFIGMFIVGEILTYIWSLNGMHDALWLAYVATFIKQWGLTSATGFMWALVPEVVAYGELKSGKSN
AAIINAIMGLFFKIGFTLGGAIPLWFLAAYGFNETAAHQHANALAGINLTAIWIPAVLALVSMIIMQLYPISDKDVAEIN
QQLDEKRAQLKEAE
>Mature_494_residues
MYSKMSNEIKQVQHDEYHELTLGERIGYGMGDFAQNLVFGTVGGFLALYMTTVNAIGTATAGFIFLFVRIINVFWDPMVG
TFVDKRTSKAGKYRPWLLRAGIPLVILAALLFAPLPGVKGSVPFAFIVYFALDLVYSVVNIPYGSLNASLTRNPESVDKL
TSTRMMLANGANLLVYTLFPMFVQMAAPKGRSLKDTGLFGLKLHMGNYTDPSAGHAWFGVYSVYMIIGAIALFLCYKLTK
ERVVATAEQSAEVKTTDLFLELKNNRPLVILGIFFMLAFTFMFFMNTVNGFFNQFVVGHSEWMGDIGLIASIPGIVFPIF
WPRLKKIFGKKGFFHLFIGMFIVGEILTYIWSLNGMHDALWLAYVATFIKQWGLTSATGFMWALVPEVVAYGELKSGKSN
AAIINAIMGLFFKIGFTLGGAIPLWFLAAYGFNETAAHQHANALAGINLTAIWIPAVLALVSMIIMQLYPISDKDVAEIN
QQLDEKRAQLKEAE

Specific function: Unknown

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Escherichia coli, GI1786466, Length=481, Percent_Identity=28.0665280665281, Blast_Score=161, Evalue=9e-41,
Organism=Escherichia coli, GI1787902, Length=482, Percent_Identity=29.4605809128631, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI48994989, Length=486, Percent_Identity=26.5432098765432, Blast_Score=139, Evalue=6e-34,
Organism=Escherichia coli, GI87082306, Length=497, Percent_Identity=23.7424547283702, Blast_Score=118, Evalue=8e-28,
Organism=Escherichia coli, GI145693206, Length=476, Percent_Identity=23.9495798319328, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1790561, Length=494, Percent_Identity=21.6599190283401, Blast_Score=75, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 54795; Mature: 54795

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]