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Identifier: 30024030

GI number: 30024030

Start: 1260140

End: 1260433

Strand: Reverse

Name: Not Available

Synonym: L200052

Alternate gene names: 30024030

Gene position: 1260433-1260140 (Counterclockwise)

Preceding gene: 15673219

Following gene: 15673214

Centisome position: 53.28

GC content: 34.35

Gene sequence:

>294_bases
TTGCATTACCGTGCGTCTCAACTGGAAGGTAAACTATTTTTAGGAGATGAGACCAAAGTCTTTTTAGAATTTGTTGAACA
TGACTATGAAAAGTCTATCAGTAATCGTGCAAGAACAAGTTTCAAGAAAAATAAAGTCAGGGATTTAGCTATATTAAGTC
TTTTTTTATCATCTGGATTACGTTGTGCGGAACTTGTAGGAATCAATCTTAACGATTTAAACCTTGAAACTGGAAAAGTA
AGAGTGATGCGAAAAGAAGGAAAGAAGGATGTAGTGCCTATTGCTCATTTTTAG

Upstream 100 bases:

>100_bases
ATATAATTATCTTTGTGAACAAACCGAAGATAGTAATGGCAATACTTACATTACTAGAAATGCTAGCCGTTTAATTCATA
TCCGAAAAAAAAGCGAAACC

Downstream 100 bases:

>100_bases
CATAAATATATAACAGATTATTTTGAGGCAAGAAGTAGCTTAAATACTGATGTAGAAGCTTTATTTATCACAGACTATAA
TCAAACAATTAGAAAAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MHYRASQLEGKLFLGDETKVFLEFVEHDYEKSISNRARTSFKKNKVRDLAILSLFLSSGLRCAELVGINLNDLNLETGKV
RVMRKEGKKDVVPIAHF

Sequences:

>Translated_97_residues
MHYRASQLEGKLFLGDETKVFLEFVEHDYEKSISNRARTSFKKNKVRDLAILSLFLSSGLRCAELVGINLNDLNLETGKV
RVMRKEGKKDVVPIAHF
>Mature_97_residues
MHYRASQLEGKLFLGDETKVFLEFVEHDYEKSISNRARTSFKKNKVRDLAILSLFLSSGLRCAELVGINLNDLNLETGKV
RVMRKEGKKDVVPIAHF

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerS subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 11111; Mature: 11111

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYRASQLEGKLFLGDETKVFLEFVEHDYEKSISNRARTSFKKNKVRDLAILSLFLSSGL
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RCAELVGINLNDLNLETGKVRVMRKEGKKDVVPIAHF
CEEHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MHYRASQLEGKLFLGDETKVFLEFVEHDYEKSISNRARTSFKKNKVRDLAILSLFLSSGL
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RCAELVGINLNDLNLETGKVRVMRKEGKKDVVPIAHF
CEEHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]