Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29349737

Identifier: 29349737

GI number: 29349737

Start: 5702097

End: 5702693

Strand: Reverse

Name: 29349737

Synonym: BT_4329

Alternate gene names: NA

Gene position: 5702693-5702097 (Counterclockwise)

Preceding gene: 29349738

Following gene: 29349736

Centisome position: 91.09

GC content: 45.39

Gene sequence:

>597_bases
ATGGACAAAAAAGTAGAATTACAAGTTTTAAATATCACAAATAGCCAAGCGCAAGTAGGCGCTTTTGCCCTACTGTTGGG
TGAAGTGAACGGTGAACGGCAACTGCCTATCATCATAGGTCCCGCTGAAGCTCAGGCAACCGCCCTGTATATGAAGGGGG
TCAAAACTCCCCGCCCTCTGACACACGACCTGTTCATGACCATTATCGGCGTATTAGGAGCTAGTTTGCTCCGCGTATTG
ATCTACAAGGCGAAGGACGGTATTTTCTATTCCTACATTTACCTTAAAAAAGACGAAGAAATTATACGTATCGATACACG
TACCTCGGATGCTGTCGGTATGGCAATCCGTGCTGAATGTCCGATCCTCATTTATGAATCCATTCTGGAACAGGAATGCC
TTCGGATATCGAACGAGGAAAGAAGACATCCTGAAGAGTCTGATGAAGAAGCGGAAGACGAAAAGAAGCGGGATCTGCCT
CGCAACGTTACTTCAATGTCACTCGAAGAAGCATTGGATCAAGCAATCAAAGACGAGAATTACGAACTGGCTGCCAAGAT
ACGCGACCGGATCAATTCAAGAAATCAAAACCACTAA

Upstream 100 bases:

>100_bases
ATCTTTGCGGCGTATGCACTGGTGATCGGCATCCTGTTTGCTCTGGTATTCAAGTACAAACACCAACGAGAGAATAAAGT
AAATTAAGTAAAAAAGAACA

Downstream 100 bases:

>100_bases
CCAATTATGCACGTATTTTATACTCCCGATATACAGAAAAACTACGAACTTCCGGAAGAGGAAGCACAACATTGTACCCG
CGTCCTGCGGTTGGGTATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MDKKVELQVLNITNSQAQVGAFALLLGEVNGERQLPIIIGPAEAQATALYMKGVKTPRPLTHDLFMTIIGVLGASLLRVL
IYKAKDGIFYSYIYLKKDEEIIRIDTRTSDAVGMAIRAECPILIYESILEQECLRISNEERRHPEESDEEAEDEKKRDLP
RNVTSMSLEEALDQAIKDENYELAAKIRDRINSRNQNH

Sequences:

>Translated_198_residues
MDKKVELQVLNITNSQAQVGAFALLLGEVNGERQLPIIIGPAEAQATALYMKGVKTPRPLTHDLFMTIIGVLGASLLRVL
IYKAKDGIFYSYIYLKKDEEIIRIDTRTSDAVGMAIRAECPILIYESILEQECLRISNEERRHPEESDEEAEDEKKRDLP
RNVTSMSLEEALDQAIKDENYELAAKIRDRINSRNQNH
>Mature_198_residues
MDKKVELQVLNITNSQAQVGAFALLLGEVNGERQLPIIIGPAEAQATALYMKGVKTPRPLTHDLFMTIIGVLGASLLRVL
IYKAKDGIFYSYIYLKKDEEIIRIDTRTSDAVGMAIRAECPILIYESILEQECLRISNEERRHPEESDEEAEDEKKRDLP
RNVTSMSLEEALDQAIKDENYELAAKIRDRINSRNQNH

Specific function: Unknown

COG id: COG1259

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003729 [H]

Pfam domain/function: PF02577 DUF151 [H]

EC number: NA

Molecular weight: Translated: 22487; Mature: 22487

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKVELQVLNITNSQAQVGAFALLLGEVNGERQLPIIIGPAEAQATALYMKGVKTPRPL
CCCEEEEEEEEECCCCHHHHHHHHEEECCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCC
THDLFMTIIGVLGASLLRVLIYKAKDGIFYSYIYLKKDEEIIRIDTRTSDAVGMAIRAEC
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEECCCCCHHCEEEECCC
PILIYESILEQECLRISNEERRHPEESDEEAEDEKKRDLPRNVTSMSLEEALDQAIKDEN
CHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
YELAAKIRDRINSRNQNH
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDKKVELQVLNITNSQAQVGAFALLLGEVNGERQLPIIIGPAEAQATALYMKGVKTPRPL
CCCEEEEEEEEECCCCHHHHHHHHEEECCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCC
THDLFMTIIGVLGASLLRVLIYKAKDGIFYSYIYLKKDEEIIRIDTRTSDAVGMAIRAEC
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEECCCCCHHCEEEECCC
PILIYESILEQECLRISNEERRHPEESDEEAEDEKKRDLPRNVTSMSLEEALDQAIKDEN
CHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
YELAAKIRDRINSRNQNH
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]