| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349733
Identifier: 29349733
GI number: 29349733
Start: 5697911
End: 5699116
Strand: Reverse
Name: 29349733
Synonym: BT_4325
Alternate gene names: NA
Gene position: 5699116-5697911 (Counterclockwise)
Preceding gene: 29349734
Following gene: 29349732
Centisome position: 91.03
GC content: 45.19
Gene sequence:
>1206_bases ATGAATACCCTTGTCTGGAAACTTCTCCGCCAACATATCAGTATCGGTCAGTTAGCCGGTTTCTTTTTAGCCAACTTGTT CGGCATGATGATTGTATTGCTCAGCGTACAGTTTTACAAAGATGTCATTCCCGTATTCACCGAAGGAGACAGCTTTATGA AAAAAGACTTCATCATAGCAACCAAGAAAATCAGTACGCTCGGGTCTTTTGCCGGAAAAAGCAATACGTTCTCTCCCGAT GACATCGCCGATCTGAAAAAACAGTCGTTTACCAAAACGATAGGAGCTTTCACCCCTTCTCAATTCAAAGTTTCGGCAGG ATTGGGAATGCAGGAAGCGGGTATTCATCTCTCTACGGATATGTTCTTCGAGTCAGTTCCCGATGAATTTGTAGATATCA AACTCGATAAATGGCACTTCGACGAAGAAACACATACCATTCCCATCATCATCCCACGCAATTATCTGAATCTGTATAAC TTCGGTTTCGCTCAAAGCCGCAGTCTGCCTAAGTTGTCAGAAGGACTGATGGGACTTATTCAGATGGACATCATGATGCG GGGCAACGGACGGGTAGAACAATACAAGGGAAACATCGTCGGTTTTTCCAACCGTCTGAATACGATTCTCGTTCCGCAGT CTTTCATGAACTGGGCCAACAAGAACTTCGCCCCTGACGCGGAGGCACAACCTGCCCGACTGATCATCGAGGTCAGCAAT CCCGCCGACTCTTCGATTGCCAGCTACTTTCAAAAGAAAGGCTACGAGACGGAAGACGGGAAACTGGATGCCGGAAAGAC TACTTATTTCCTTCGCCTTATCGTAGGTATTGTGCTGGGAGTAGGTTTATTCATCAGTATCCTGTCATTCTATATCCTGA TGCTCAGCATATTCTTACTGCTCCAAAAGAATACAACCAAGCTCGAAAGCCTGCTTCTGATAGGCTACAGCCCCAACAGA GTGGCGCTGCCTTATCAGATACTGACCGTAGGACTGAACATCATCGTACTGATTTTATCTGTCGGATTGGTATGCTGGCT GCGCAGCTATTACATAGAGAGTATCAGACTCCTCTTCCCGCAACTGGAAACCGGTTCGTTATGGGCAGCTGTCAGTATGG GTATTCTTTTATTCCTCATCGTATCAGTCATTAATATACTGGCTGTGAAGCGAAAAGTTCTTTCTATCTGGATGCATAAA AATTAA
Upstream 100 bases:
>100_bases CACGTCCATTGGCAAACATATCGAACTGCCATACAAGAAGGTGCTTCAACTATAATAGAATCTGCGTCATTCGCGCCTAA AAATATAAAAATACAAAATA
Downstream 100 bases:
>100_bases AAACACAATATATGAAAAACACCACTACTCTTCAAAGTAAAAGAAGTATTACAGTACTCTTGGGAGTCCTTCTATATTTC TCATCGCTATCTGCACAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MNTLVWKLLRQHISIGQLAGFFLANLFGMMIVLLSVQFYKDVIPVFTEGDSFMKKDFIIATKKISTLGSFAGKSNTFSPD DIADLKKQSFTKTIGAFTPSQFKVSAGLGMQEAGIHLSTDMFFESVPDEFVDIKLDKWHFDEETHTIPIIIPRNYLNLYN FGFAQSRSLPKLSEGLMGLIQMDIMMRGNGRVEQYKGNIVGFSNRLNTILVPQSFMNWANKNFAPDAEAQPARLIIEVSN PADSSIASYFQKKGYETEDGKLDAGKTTYFLRLIVGIVLGVGLFISILSFYILMLSIFLLLQKNTTKLESLLLIGYSPNR VALPYQILTVGLNIIVLILSVGLVCWLRSYYIESIRLLFPQLETGSLWAAVSMGILLFLIVSVINILAVKRKVLSIWMHK N
Sequences:
>Translated_401_residues MNTLVWKLLRQHISIGQLAGFFLANLFGMMIVLLSVQFYKDVIPVFTEGDSFMKKDFIIATKKISTLGSFAGKSNTFSPD DIADLKKQSFTKTIGAFTPSQFKVSAGLGMQEAGIHLSTDMFFESVPDEFVDIKLDKWHFDEETHTIPIIIPRNYLNLYN FGFAQSRSLPKLSEGLMGLIQMDIMMRGNGRVEQYKGNIVGFSNRLNTILVPQSFMNWANKNFAPDAEAQPARLIIEVSN PADSSIASYFQKKGYETEDGKLDAGKTTYFLRLIVGIVLGVGLFISILSFYILMLSIFLLLQKNTTKLESLLLIGYSPNR VALPYQILTVGLNIIVLILSVGLVCWLRSYYIESIRLLFPQLETGSLWAAVSMGILLFLIVSVINILAVKRKVLSIWMHK N >Mature_401_residues MNTLVWKLLRQHISIGQLAGFFLANLFGMMIVLLSVQFYKDVIPVFTEGDSFMKKDFIIATKKISTLGSFAGKSNTFSPD DIADLKKQSFTKTIGAFTPSQFKVSAGLGMQEAGIHLSTDMFFESVPDEFVDIKLDKWHFDEETHTIPIIIPRNYLNLYN FGFAQSRSLPKLSEGLMGLIQMDIMMRGNGRVEQYKGNIVGFSNRLNTILVPQSFMNWANKNFAPDAEAQPARLIIEVSN PADSSIASYFQKKGYETEDGKLDAGKTTYFLRLIVGIVLGVGLFISILSFYILMLSIFLLLQKNTTKLESLLLIGYSPNR VALPYQILTVGLNIIVLILSVGLVCWLRSYYIESIRLLFPQLETGSLWAAVSMGILLFLIVSVINILAVKRKVLSIWMHK N
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45034; Mature: 45034
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLVWKLLRQHISIGQLAGFFLANLFGMMIVLLSVQFYKDVIPVFTEGDSFMKKDFIIA CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHEEE TKKISTLGSFAGKSNTFSPDDIADLKKQSFTKTIGAFTPSQFKVSAGLGMQEAGIHLSTD HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHCCCEEEHH MFFESVPDEFVDIKLDKWHFDEETHTIPIIIPRNYLNLYNFGFAQSRSLPKLSEGLMGLI HHHHHCCCHHHEEEEECEECCCCCCEEEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHH QMDIMMRGNGRVEQYKGNIVGFSNRLNTILVPQSFMNWANKNFAPDAEAQPARLIIEVSN HHHHEECCCCCEEECCCCEEEECCCCCEEECCHHHHHHCCCCCCCCCCCCCCEEEEEECC PADSSIASYFQKKGYETEDGKLDAGKTTYFLRLIVGIVLGVGLFISILSFYILMLSIFLL CCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQKNTTKLESLLLIGYSPNRVALPYQILTVGLNIIVLILSVGLVCWLRSYYIESIRLLFP HCCCCHHHEEEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QLETGSLWAAVSMGILLFLIVSVINILAVKRKVLSIWMHKN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNTLVWKLLRQHISIGQLAGFFLANLFGMMIVLLSVQFYKDVIPVFTEGDSFMKKDFIIA CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHEEE TKKISTLGSFAGKSNTFSPDDIADLKKQSFTKTIGAFTPSQFKVSAGLGMQEAGIHLSTD HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHCCCEEEHH MFFESVPDEFVDIKLDKWHFDEETHTIPIIIPRNYLNLYNFGFAQSRSLPKLSEGLMGLI HHHHHCCCHHHEEEEECEECCCCCCEEEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHH QMDIMMRGNGRVEQYKGNIVGFSNRLNTILVPQSFMNWANKNFAPDAEAQPARLIIEVSN HHHHEECCCCCEEECCCCEEEECCCCCEEECCHHHHHHCCCCCCCCCCCCCCEEEEEECC PADSSIASYFQKKGYETEDGKLDAGKTTYFLRLIVGIVLGVGLFISILSFYILMLSIFLL CCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQKNTTKLESLLLIGYSPNRVALPYQILTVGLNIIVLILSVGLVCWLRSYYIESIRLLFP HCCCCHHHEEEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QLETGSLWAAVSMGILLFLIVSVINILAVKRKVLSIWMHKN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA