Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349733

Identifier: 29349733

GI number: 29349733

Start: 5697911

End: 5699116

Strand: Reverse

Name: 29349733

Synonym: BT_4325

Alternate gene names: NA

Gene position: 5699116-5697911 (Counterclockwise)

Preceding gene: 29349734

Following gene: 29349732

Centisome position: 91.03

GC content: 45.19

Gene sequence:

>1206_bases
ATGAATACCCTTGTCTGGAAACTTCTCCGCCAACATATCAGTATCGGTCAGTTAGCCGGTTTCTTTTTAGCCAACTTGTT
CGGCATGATGATTGTATTGCTCAGCGTACAGTTTTACAAAGATGTCATTCCCGTATTCACCGAAGGAGACAGCTTTATGA
AAAAAGACTTCATCATAGCAACCAAGAAAATCAGTACGCTCGGGTCTTTTGCCGGAAAAAGCAATACGTTCTCTCCCGAT
GACATCGCCGATCTGAAAAAACAGTCGTTTACCAAAACGATAGGAGCTTTCACCCCTTCTCAATTCAAAGTTTCGGCAGG
ATTGGGAATGCAGGAAGCGGGTATTCATCTCTCTACGGATATGTTCTTCGAGTCAGTTCCCGATGAATTTGTAGATATCA
AACTCGATAAATGGCACTTCGACGAAGAAACACATACCATTCCCATCATCATCCCACGCAATTATCTGAATCTGTATAAC
TTCGGTTTCGCTCAAAGCCGCAGTCTGCCTAAGTTGTCAGAAGGACTGATGGGACTTATTCAGATGGACATCATGATGCG
GGGCAACGGACGGGTAGAACAATACAAGGGAAACATCGTCGGTTTTTCCAACCGTCTGAATACGATTCTCGTTCCGCAGT
CTTTCATGAACTGGGCCAACAAGAACTTCGCCCCTGACGCGGAGGCACAACCTGCCCGACTGATCATCGAGGTCAGCAAT
CCCGCCGACTCTTCGATTGCCAGCTACTTTCAAAAGAAAGGCTACGAGACGGAAGACGGGAAACTGGATGCCGGAAAGAC
TACTTATTTCCTTCGCCTTATCGTAGGTATTGTGCTGGGAGTAGGTTTATTCATCAGTATCCTGTCATTCTATATCCTGA
TGCTCAGCATATTCTTACTGCTCCAAAAGAATACAACCAAGCTCGAAAGCCTGCTTCTGATAGGCTACAGCCCCAACAGA
GTGGCGCTGCCTTATCAGATACTGACCGTAGGACTGAACATCATCGTACTGATTTTATCTGTCGGATTGGTATGCTGGCT
GCGCAGCTATTACATAGAGAGTATCAGACTCCTCTTCCCGCAACTGGAAACCGGTTCGTTATGGGCAGCTGTCAGTATGG
GTATTCTTTTATTCCTCATCGTATCAGTCATTAATATACTGGCTGTGAAGCGAAAAGTTCTTTCTATCTGGATGCATAAA
AATTAA

Upstream 100 bases:

>100_bases
CACGTCCATTGGCAAACATATCGAACTGCCATACAAGAAGGTGCTTCAACTATAATAGAATCTGCGTCATTCGCGCCTAA
AAATATAAAAATACAAAATA

Downstream 100 bases:

>100_bases
AAACACAATATATGAAAAACACCACTACTCTTCAAAGTAAAAGAAGTATTACAGTACTCTTGGGAGTCCTTCTATATTTC
TCATCGCTATCTGCACAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MNTLVWKLLRQHISIGQLAGFFLANLFGMMIVLLSVQFYKDVIPVFTEGDSFMKKDFIIATKKISTLGSFAGKSNTFSPD
DIADLKKQSFTKTIGAFTPSQFKVSAGLGMQEAGIHLSTDMFFESVPDEFVDIKLDKWHFDEETHTIPIIIPRNYLNLYN
FGFAQSRSLPKLSEGLMGLIQMDIMMRGNGRVEQYKGNIVGFSNRLNTILVPQSFMNWANKNFAPDAEAQPARLIIEVSN
PADSSIASYFQKKGYETEDGKLDAGKTTYFLRLIVGIVLGVGLFISILSFYILMLSIFLLLQKNTTKLESLLLIGYSPNR
VALPYQILTVGLNIIVLILSVGLVCWLRSYYIESIRLLFPQLETGSLWAAVSMGILLFLIVSVINILAVKRKVLSIWMHK
N

Sequences:

>Translated_401_residues
MNTLVWKLLRQHISIGQLAGFFLANLFGMMIVLLSVQFYKDVIPVFTEGDSFMKKDFIIATKKISTLGSFAGKSNTFSPD
DIADLKKQSFTKTIGAFTPSQFKVSAGLGMQEAGIHLSTDMFFESVPDEFVDIKLDKWHFDEETHTIPIIIPRNYLNLYN
FGFAQSRSLPKLSEGLMGLIQMDIMMRGNGRVEQYKGNIVGFSNRLNTILVPQSFMNWANKNFAPDAEAQPARLIIEVSN
PADSSIASYFQKKGYETEDGKLDAGKTTYFLRLIVGIVLGVGLFISILSFYILMLSIFLLLQKNTTKLESLLLIGYSPNR
VALPYQILTVGLNIIVLILSVGLVCWLRSYYIESIRLLFPQLETGSLWAAVSMGILLFLIVSVINILAVKRKVLSIWMHK
N
>Mature_401_residues
MNTLVWKLLRQHISIGQLAGFFLANLFGMMIVLLSVQFYKDVIPVFTEGDSFMKKDFIIATKKISTLGSFAGKSNTFSPD
DIADLKKQSFTKTIGAFTPSQFKVSAGLGMQEAGIHLSTDMFFESVPDEFVDIKLDKWHFDEETHTIPIIIPRNYLNLYN
FGFAQSRSLPKLSEGLMGLIQMDIMMRGNGRVEQYKGNIVGFSNRLNTILVPQSFMNWANKNFAPDAEAQPARLIIEVSN
PADSSIASYFQKKGYETEDGKLDAGKTTYFLRLIVGIVLGVGLFISILSFYILMLSIFLLLQKNTTKLESLLLIGYSPNR
VALPYQILTVGLNIIVLILSVGLVCWLRSYYIESIRLLFPQLETGSLWAAVSMGILLFLIVSVINILAVKRKVLSIWMHK
N

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45034; Mature: 45034

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLVWKLLRQHISIGQLAGFFLANLFGMMIVLLSVQFYKDVIPVFTEGDSFMKKDFIIA
CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHEEE
TKKISTLGSFAGKSNTFSPDDIADLKKQSFTKTIGAFTPSQFKVSAGLGMQEAGIHLSTD
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHCCCEEEHH
MFFESVPDEFVDIKLDKWHFDEETHTIPIIIPRNYLNLYNFGFAQSRSLPKLSEGLMGLI
HHHHHCCCHHHEEEEECEECCCCCCEEEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHH
QMDIMMRGNGRVEQYKGNIVGFSNRLNTILVPQSFMNWANKNFAPDAEAQPARLIIEVSN
HHHHEECCCCCEEECCCCEEEECCCCCEEECCHHHHHHCCCCCCCCCCCCCCEEEEEECC
PADSSIASYFQKKGYETEDGKLDAGKTTYFLRLIVGIVLGVGLFISILSFYILMLSIFLL
CCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQKNTTKLESLLLIGYSPNRVALPYQILTVGLNIIVLILSVGLVCWLRSYYIESIRLLFP
HCCCCHHHEEEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QLETGSLWAAVSMGILLFLIVSVINILAVKRKVLSIWMHKN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTLVWKLLRQHISIGQLAGFFLANLFGMMIVLLSVQFYKDVIPVFTEGDSFMKKDFIIA
CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHEEE
TKKISTLGSFAGKSNTFSPDDIADLKKQSFTKTIGAFTPSQFKVSAGLGMQEAGIHLSTD
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHCCCEEEHH
MFFESVPDEFVDIKLDKWHFDEETHTIPIIIPRNYLNLYNFGFAQSRSLPKLSEGLMGLI
HHHHHCCCHHHEEEEECEECCCCCCEEEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHH
QMDIMMRGNGRVEQYKGNIVGFSNRLNTILVPQSFMNWANKNFAPDAEAQPARLIIEVSN
HHHHEECCCCCEEECCCCEEEECCCCCEEECCHHHHHHCCCCCCCCCCCCCCEEEEEECC
PADSSIASYFQKKGYETEDGKLDAGKTTYFLRLIVGIVLGVGLFISILSFYILMLSIFLL
CCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQKNTTKLESLLLIGYSPNRVALPYQILTVGLNIIVLILSVGLVCWLRSYYIESIRLLFP
HCCCCHHHEEEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QLETGSLWAAVSMGILLFLIVSVINILAVKRKVLSIWMHKN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA