| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349727
Identifier: 29349727
GI number: 29349727
Start: 5687867
End: 5689357
Strand: Reverse
Name: 29349727
Synonym: BT_4319
Alternate gene names: NA
Gene position: 5689357-5687867 (Counterclockwise)
Preceding gene: 29349728
Following gene: 29349726
Centisome position: 90.88
GC content: 45.0
Gene sequence:
>1491_bases ATGATATTTAACGAATTACGCAAACATGGACGGCTCGCCTCCAAACGGCATCCGATGTATGAAAAGAACAAAGTTGCCAA AATATTCGGATATATCGGGGTTGCTTTTTGGGCAGGATACCTGATATTCTTCGGTACGACGTTTGCATTCGGTTTTGCAG ATATGGTTCCCAACCGGGAACCATATCATGTAATGAATGCCGTTGCCCTGATATTTATTCTGGCACTTGACTTCCTCTTG CGTATTCCGTTCCAAAAGACACCGACGCAGGAGGTAAAACCTTACCTCCTGTTGCCGGTTAAACGAAATCGGATCATCGA TTTCCTGCTTATCCGTTCGGGACTTAGTCTGTTCAACCTGTTCTGGTTGTTTATGTTCGTCCCCTTTTCCTTCATTACCA TTACCAAATATTTCGGTATCTCAGGTGTACTCACCTATCTCATAGGCATCTGGCTTTTGATCGTTGCCAACAATTACTGG TACTTGTTATGTCGCACACTAATCAATGAACGTATTTGGTGGGTGCTGCTCCCCATCGCTTTCTACGGTGGACTGGGCTG CCTTGCCTTTATTCCCGAAGACAGTCCCCTGTTCTACTTCTTTATGGACCTGGGCGACGGATATATCAACGGGAATATTC TCTGTTTCCTCGGTACCATTCTTGTCATAGCCATCTTATGGCTGATTAACCGCAAAATCATGTCCGGCCTCATCTACGCC GAATTGGCAAAAGTAGATGATACCCGCATCAAGCATGTTTCAGAATACAAATTCTTCGAGCGATACGGAGAAGTTGGTGA ATATATGCGGTTGGAATTAAAAATGCTTTTGCGCAACCGGCGTTGCAAAGGTGCATTGCGCAATGTTCTCCTTGTAGTCA TCGCCTTCTCCTGCCTGTTGAGCTTTTCAAGCCTTTATGACACGAGCACCATGACTACCTTTATCTGTGTTTACAACTTT GCCGTATTCGGCATGATCATCCTTTCGCAACTCATGTCCTTCGAAGGCAATTACATCGATGGACTAATGTCCCGCAAAGA ATCCATCATGAGTCTGCTGAAAGCAAAATATTATATCTATACTATCGGCGAGATCGTCCCATTTGTCCTGATGATTCCCG CCATTGTAATGGATAAAGTTCCCTTACTGGGTATCTTTGCCTGGTTCTTCTATACCACCGGTTTTATCTATTTTTGTTTC TTCCAACTGGCTGTTTACAATAAGCAGACCGTAGCACTGAACGAGAAAGTGACAAGCCGCCAGACCAACAGCGCCATACA AATGGTTGTCAACTTCGGAGCTTTCGGTATCCCGTTGATCCTGTATTCTGTGTTGAATGCGTTTCTGGGTGAAACGGCCG CCTACTCTATCCTGTTCGCCATCGGGCTTGGATTCACACTGACTTCTCCGCTTTGGATCAGAAACGTCTATAAGCGTTTC ATGAAACGGAGATACGAGAATATGGAAGGCTTCAGAGACAGTCGCCAATAA
Upstream 100 bases:
>100_bases TTCCTTGCCAAGCTGATGAAACAGAACAACGAAATCCAAGTCATCATGACCGTACCTGAAGAAGAAGCTAAATAAACTTT TATAGCATACCAACAGTATG
Downstream 100 bases:
>100_bases GAGATTTACGATTGAACCGATTAATCATTTACGATAAAAATACCAAGACAATGATAAGCATCAATAATCTTCAAAAGAAA TTCGGCGAAAAGTTAGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MIFNELRKHGRLASKRHPMYEKNKVAKIFGYIGVAFWAGYLIFFGTTFAFGFADMVPNREPYHVMNAVALIFILALDFLL RIPFQKTPTQEVKPYLLLPVKRNRIIDFLLIRSGLSLFNLFWLFMFVPFSFITITKYFGISGVLTYLIGIWLLIVANNYW YLLCRTLINERIWWVLLPIAFYGGLGCLAFIPEDSPLFYFFMDLGDGYINGNILCFLGTILVIAILWLINRKIMSGLIYA ELAKVDDTRIKHVSEYKFFERYGEVGEYMRLELKMLLRNRRCKGALRNVLLVVIAFSCLLSFSSLYDTSTMTTFICVYNF AVFGMIILSQLMSFEGNYIDGLMSRKESIMSLLKAKYYIYTIGEIVPFVLMIPAIVMDKVPLLGIFAWFFYTTGFIYFCF FQLAVYNKQTVALNEKVTSRQTNSAIQMVVNFGAFGIPLILYSVLNAFLGETAAYSILFAIGLGFTLTSPLWIRNVYKRF MKRRYENMEGFRDSRQ
Sequences:
>Translated_496_residues MIFNELRKHGRLASKRHPMYEKNKVAKIFGYIGVAFWAGYLIFFGTTFAFGFADMVPNREPYHVMNAVALIFILALDFLL RIPFQKTPTQEVKPYLLLPVKRNRIIDFLLIRSGLSLFNLFWLFMFVPFSFITITKYFGISGVLTYLIGIWLLIVANNYW YLLCRTLINERIWWVLLPIAFYGGLGCLAFIPEDSPLFYFFMDLGDGYINGNILCFLGTILVIAILWLINRKIMSGLIYA ELAKVDDTRIKHVSEYKFFERYGEVGEYMRLELKMLLRNRRCKGALRNVLLVVIAFSCLLSFSSLYDTSTMTTFICVYNF AVFGMIILSQLMSFEGNYIDGLMSRKESIMSLLKAKYYIYTIGEIVPFVLMIPAIVMDKVPLLGIFAWFFYTTGFIYFCF FQLAVYNKQTVALNEKVTSRQTNSAIQMVVNFGAFGIPLILYSVLNAFLGETAAYSILFAIGLGFTLTSPLWIRNVYKRF MKRRYENMEGFRDSRQ >Mature_496_residues MIFNELRKHGRLASKRHPMYEKNKVAKIFGYIGVAFWAGYLIFFGTTFAFGFADMVPNREPYHVMNAVALIFILALDFLL RIPFQKTPTQEVKPYLLLPVKRNRIIDFLLIRSGLSLFNLFWLFMFVPFSFITITKYFGISGVLTYLIGIWLLIVANNYW YLLCRTLINERIWWVLLPIAFYGGLGCLAFIPEDSPLFYFFMDLGDGYINGNILCFLGTILVIAILWLINRKIMSGLIYA ELAKVDDTRIKHVSEYKFFERYGEVGEYMRLELKMLLRNRRCKGALRNVLLVVIAFSCLLSFSSLYDTSTMTTFICVYNF AVFGMIILSQLMSFEGNYIDGLMSRKESIMSLLKAKYYIYTIGEIVPFVLMIPAIVMDKVPLLGIFAWFFYTTGFIYFCF FQLAVYNKQTVALNEKVTSRQTNSAIQMVVNFGAFGIPLILYSVLNAFLGETAAYSILFAIGLGFTLTSPLWIRNVYKRF MKRRYENMEGFRDSRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57520; Mature: 57520
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFNELRKHGRLASKRHPMYEKNKVAKIFGYIGVAFWAGYLIFFGTTFAFGFADMVPNRE CCHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PYHVMNAVALIFILALDFLLRIPFQKTPTQEVKPYLLLPVKRNRIIDFLLIRSGLSLFNL HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHH FWLFMFVPFSFITITKYFGISGVLTYLIGIWLLIVANNYWYLLCRTLINERIWWVLLPIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH FYGGLGCLAFIPEDSPLFYFFMDLGDGYINGNILCFLGTILVIAILWLINRKIMSGLIYA HHCCCCCEEECCCCCCEEEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELAKVDDTRIKHVSEYKFFERYGEVGEYMRLELKMLLRNRRCKGALRNVLLVVIAFSCLL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SFSSLYDTSTMTTFICVYNFAVFGMIILSQLMSFEGNYIDGLMSRKESIMSLLKAKYYIY HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHE TIGEIVPFVLMIPAIVMDKVPLLGIFAWFFYTTGFIYFCFFQLAVYNKQTVALNEKVTSR EHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHH QTNSAIQMVVNFGAFGIPLILYSVLNAFLGETAAYSILFAIGLGFTLTSPLWIRNVYKRF HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH MKRRYENMEGFRDSRQ HHHHHHHHHHHCCCCC >Mature Secondary Structure MIFNELRKHGRLASKRHPMYEKNKVAKIFGYIGVAFWAGYLIFFGTTFAFGFADMVPNRE CCHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PYHVMNAVALIFILALDFLLRIPFQKTPTQEVKPYLLLPVKRNRIIDFLLIRSGLSLFNL HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHH FWLFMFVPFSFITITKYFGISGVLTYLIGIWLLIVANNYWYLLCRTLINERIWWVLLPIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH FYGGLGCLAFIPEDSPLFYFFMDLGDGYINGNILCFLGTILVIAILWLINRKIMSGLIYA HHCCCCCEEECCCCCCEEEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELAKVDDTRIKHVSEYKFFERYGEVGEYMRLELKMLLRNRRCKGALRNVLLVVIAFSCLL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SFSSLYDTSTMTTFICVYNFAVFGMIILSQLMSFEGNYIDGLMSRKESIMSLLKAKYYIY HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHE TIGEIVPFVLMIPAIVMDKVPLLGIFAWFFYTTGFIYFCFFQLAVYNKQTVALNEKVTSR EHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHH QTNSAIQMVVNFGAFGIPLILYSVLNAFLGETAAYSILFAIGLGFTLTSPLWIRNVYKRF HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH MKRRYENMEGFRDSRQ HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA