Click here to switch to the map view.

The map label for this gene is ybeZ [C]

Identifier: 29349626

GI number: 29349626

Start: 5554609

End: 5555625

Strand: Reverse

Name: ybeZ [C]

Synonym: BT_4218

Alternate gene names: 29349626

Gene position: 5555625-5554609 (Counterclockwise)

Preceding gene: 29349627

Following gene: 29349625

Centisome position: 88.74

GC content: 45.53

Gene sequence:

>1017_bases
ATGATAGAGAAACTGATTGTTCTTGAGGATATTGACCCGGTTATTTTTTACGGCGTAAACAACGCCAATATACAGTTAAT
TAAAGCTTTATATCCGAAGCTACGCATCGTTGCCCGCGGCAATGTCATCAAAGTGCTGGGCGATGAGGAGGAAATGTGTG
CCTTCGAAGAAAATATCACCAAACTCGAAAAATACTGTGCCGAATATAATTCGCTGAAAGAGGAAGTCATCATCGACATT
ATAAAAGGGAATGCTCCGCAAGCGGAACAGACCGGAAACGTAATTGTTTTCAGCGTTACCGGCAAGCCCATTATCCCACG
AAGCGAGAACCAGCTGAAACTGGTGGAAGGCTTTGCCAAAAACGATATGGTATTCGCCATCGGCCCCGCCGGTTCGGGAA
AAACATATACTGCCATAGCCCTCGCCGTCCGTGCGCTGAAAAACAAAGAGATCAAAAAGATTATCCTCAGCCGCCCCGCT
GTAGAAGCCGGAGAAAAACTCGGTTTCCTGCCCGGCGATATGAAAGATAAGATCGATCCGTATCTGCAACCATTATATGA
TGCTCTGCAGGACATGATCCCCGCTGCCAAGTTAAAGGAATACATGGAATTGAACATTATTCAGATTGCTCCGTTAGCAT
TTATGCGTGGACGTACACTGAATGACGCAGTCGTAATCTTGGACGAAGCGCAGAATACCACTGTACAACAAATCAAAATG
TTCCTCACCCGTATGGGTATGAATACCAAAATGATCGTTACGGGAGATATGACTCAAATTGACCTCCCCGCCTCACAAAC
TTCGGGACTGGTGCAAGCACTCCGCATCCTGAAAGGGGTAAAGGGAATCAGCTTTGTAGAATTGAACAAAAAAGATATTG
TACGCCATAAACTAGTGGAACGCATCGTAGATGCTTACGAAAAATTCGACAAGGAGGCGAAAGCCGAAAGGGAGAAACGA
AAGAATGAACAACTGGTTATCAACGGCGAACGACCGGTGAAACAGGTCAACAACTAG

Upstream 100 bases:

>100_bases
TGCACGATGAGTATAAATTGCAATAAAATTCACCCGTAAACAGCCGAAGAATCCAAAACGTTTCACTAAATTTGCAGAAA
TTTTTCTTTAATACGATTCA

Downstream 100 bases:

>100_bases
TCGTTTCTGTGATTTGTAACTTGTAATTTGTAATTATAATAAAACAATGAAAGCATTAACAAAAACAGATTTCAACTTTC
CGGGACAAAAAAGCGTGTAC

Product: phosphate starvation-inducible protein, PhoH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MIEKLIVLEDIDPVIFYGVNNANIQLIKALYPKLRIVARGNVIKVLGDEEEMCAFEENITKLEKYCAEYNSLKEEVIIDI
IKGNAPQAEQTGNVIVFSVTGKPIIPRSENQLKLVEGFAKNDMVFAIGPAGSGKTYTAIALAVRALKNKEIKKIILSRPA
VEAGEKLGFLPGDMKDKIDPYLQPLYDALQDMIPAAKLKEYMELNIIQIAPLAFMRGRTLNDAVVILDEAQNTTVQQIKM
FLTRMGMNTKMIVTGDMTQIDLPASQTSGLVQALRILKGVKGISFVELNKKDIVRHKLVERIVDAYEKFDKEAKAEREKR
KNEQLVINGERPVKQVNN

Sequences:

>Translated_338_residues
MIEKLIVLEDIDPVIFYGVNNANIQLIKALYPKLRIVARGNVIKVLGDEEEMCAFEENITKLEKYCAEYNSLKEEVIIDI
IKGNAPQAEQTGNVIVFSVTGKPIIPRSENQLKLVEGFAKNDMVFAIGPAGSGKTYTAIALAVRALKNKEIKKIILSRPA
VEAGEKLGFLPGDMKDKIDPYLQPLYDALQDMIPAAKLKEYMELNIIQIAPLAFMRGRTLNDAVVILDEAQNTTVQQIKM
FLTRMGMNTKMIVTGDMTQIDLPASQTSGLVQALRILKGVKGISFVELNKKDIVRHKLVERIVDAYEKFDKEAKAEREKR
KNEQLVINGERPVKQVNN
>Mature_338_residues
MIEKLIVLEDIDPVIFYGVNNANIQLIKALYPKLRIVARGNVIKVLGDEEEMCAFEENITKLEKYCAEYNSLKEEVIIDI
IKGNAPQAEQTGNVIVFSVTGKPIIPRSENQLKLVEGFAKNDMVFAIGPAGSGKTYTAIALAVRALKNKEIKKIILSRPA
VEAGEKLGFLPGDMKDKIDPYLQPLYDALQDMIPAAKLKEYMELNIIQIAPLAFMRGRTLNDAVVILDEAQNTTVQQIKM
FLTRMGMNTKMIVTGDMTQIDLPASQTSGLVQALRILKGVKGISFVELNKKDIVRHKLVERIVDAYEKFDKEAKAEREKR
KNEQLVINGERPVKQVNN

Specific function: Unknown

COG id: COG1702

COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phoH family [H]

Homologues:

Organism=Escherichia coli, GI145693103, Length=252, Percent_Identity=49.2063492063492, Blast_Score=250, Evalue=9e-68,
Organism=Escherichia coli, GI1787257, Length=208, Percent_Identity=44.7115384615385, Blast_Score=191, Evalue=7e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004087
- InterPro:   IPR003714 [H]

Pfam domain/function: PF02562 PhoH [H]

EC number: NA

Molecular weight: Translated: 37844; Mature: 37844

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKLIVLEDIDPVIFYGVNNANIQLIKALYPKLRIVARGNVIKVLGDEEEMCAFEENIT
CCCCEEEEECCCCEEEEECCCCCCHHHHHHCCCEEEEECCCEEEEECCCHHHHHHHHHHH
KLEKYCAEYNSLKEEVIIDIIKGNAPQAEQTGNVIVFSVTGKPIIPRSENQLKLVEGFAK
HHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCC
NDMVFAIGPAGSGKTYTAIALAVRALKNKEIKKIILSRPAVEAGEKLGFLPGDMKDKIDP
CCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHH
YLQPLYDALQDMIPAAKLKEYMELNIIQIAPLAFMRGRTLNDAVVILDEAQNTTVQQIKM
HHHHHHHHHHHHCCHHHHHHHHHCCEEEECHHHHHCCCCCCCEEEEEECCCCCHHHHHHH
FLTRMGMNTKMIVTGDMTQIDLPASQTSGLVQALRILKGVKGISFVELNKKDIVRHKLVE
HHHHCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHH
RIVDAYEKFDKEAKAEREKRKNEQLVINGERPVKQVNN
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCC
>Mature Secondary Structure
MIEKLIVLEDIDPVIFYGVNNANIQLIKALYPKLRIVARGNVIKVLGDEEEMCAFEENIT
CCCCEEEEECCCCEEEEECCCCCCHHHHHHCCCEEEEECCCEEEEECCCHHHHHHHHHHH
KLEKYCAEYNSLKEEVIIDIIKGNAPQAEQTGNVIVFSVTGKPIIPRSENQLKLVEGFAK
HHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCC
NDMVFAIGPAGSGKTYTAIALAVRALKNKEIKKIILSRPAVEAGEKLGFLPGDMKDKIDP
CCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHH
YLQPLYDALQDMIPAAKLKEYMELNIIQIAPLAFMRGRTLNDAVVILDEAQNTTVQQIKM
HHHHHHHHHHHHCCHHHHHHHHHCCEEEECHHHHHCCCCCCCEEEEEECCCCCHHHHHHH
FLTRMGMNTKMIVTGDMTQIDLPASQTSGLVQALRILKGVKGISFVELNKKDIVRHKLVE
HHHHCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHH
RIVDAYEKFDKEAKAEREKRKNEQLVINGERPVKQVNN
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]