Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349599

Identifier: 29349599

GI number: 29349599

Start: 5525947

End: 5527068

Strand: Reverse

Name: 29349599

Synonym: BT_4191

Alternate gene names: NA

Gene position: 5527068-5525947 (Counterclockwise)

Preceding gene: 29349600

Following gene: 29349595

Centisome position: 88.29

GC content: 42.51

Gene sequence:

>1122_bases
ATGGATCATAAAGGAACACTTTCTTCCGCGTTTAACATGTCATTGGGTTTTATCCCCGTTATTATTTCCATTTTATTGTG
TGAATTTATAACGCAAGACACGGCTATTTACATCGGTACTGGTATAGGTATTGTAGGGATATACCTATTACTACACCGTA
AAGGTGCGCTAATTCCTAATTTTATTCTTTATATTGCCACCGGAATGCTGGCACTGCTGTCACTTGCAGCCTTGATTCCC
GGTGACTATGTTCCGCCAGGTGCTCTGCCTCTTACCCTGGAAGTCAGTATCCTCATTCCGATGCTGATACTCTATATGCA
TAAAAAGAGATTTATCAACCACTTTCTGAGACAGATAGGCTCCTGCAATAAGCGCTTGTATGCGCAAGGAGCAGAGGCGG
CAGTTGTTTCGGCCCGTTTTGCATTGATCTTCGGTATCCTGCATTTTATTATTATCAGTATTGTCGTTGCCAGTCAGGAC
CCTTTAAGCCAGACAAGTATGGTGATACTTTATAAGGTATTTCCCCCTGTCGTATTTGTGATGAGTATCCTGTTCAATCA
GATTGCTATCCGGTATTTCAACCATCTGATGTCGCACACGGAATACGTGCCCATAGTCAATACGAAAGGAGATGTCATCG
GAAGAAGTCTTGCCATAGAAGCACTCAACTATAAGAATGCCTATATCAATCCGGTCATAAGAATAGCCGTATCTACTCAC
GGGATGCTGTTTCTTTGTGACAGACCGATGAATGCCATCCTTGATAAAGGGAAAACTGACATACCGATGGAATGCTATCT
CCGTTATGGTGAGTCCCTCACCGAAGGAGTAAACCGCTTGGTGCACAATGCGCTTCCACACGCAACGGAAGACTTCAAGC
CAGAGTTTAACATTGTCTATCACTTCGAGAATGAAGCAACCAACCGGCTCATCTATCTTTTCATCGTCGATATCAAAGAT
GATTCTATCCTTTGCACTCCCCGCTTCAAGAACAGTAAGCTATGGAGTTTCAAGCAGATAGAAGAAAATATGGGCAAAGG
CTTTTTCAGCAGTTGCTTCGAAGATGAATACGAACACCTGAAAGATGTTATTTGTATAAGAGAAAAATACAGGGAATCTT
AG

Upstream 100 bases:

>100_bases
TCTCGTTCGTTCGTCTTATCATGCAGAGAAACACATTCGATAGAAAACAAAACACATTCACTATTTGTTTTATAGGTAAA
ACCGGCAAATAAACATAAAG

Downstream 100 bases:

>100_bases
ACAATTCGGGAATATGCCCTTTCCAGTCTTTCACCGTGCGGGTTTGTATAAACTCGCCTTCGCAAGTTATATTGGCAGCA
ATACATAGTTTTGTCTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MDHKGTLSSAFNMSLGFIPVIISILLCEFITQDTAIYIGTGIGIVGIYLLLHRKGALIPNFILYIATGMLALLSLAALIP
GDYVPPGALPLTLEVSILIPMLILYMHKKRFINHFLRQIGSCNKRLYAQGAEAAVVSARFALIFGILHFIIISIVVASQD
PLSQTSMVILYKVFPPVVFVMSILFNQIAIRYFNHLMSHTEYVPIVNTKGDVIGRSLAIEALNYKNAYINPVIRIAVSTH
GMLFLCDRPMNAILDKGKTDIPMECYLRYGESLTEGVNRLVHNALPHATEDFKPEFNIVYHFENEATNRLIYLFIVDIKD
DSILCTPRFKNSKLWSFKQIEENMGKGFFSSCFEDEYEHLKDVICIREKYRES

Sequences:

>Translated_373_residues
MDHKGTLSSAFNMSLGFIPVIISILLCEFITQDTAIYIGTGIGIVGIYLLLHRKGALIPNFILYIATGMLALLSLAALIP
GDYVPPGALPLTLEVSILIPMLILYMHKKRFINHFLRQIGSCNKRLYAQGAEAAVVSARFALIFGILHFIIISIVVASQD
PLSQTSMVILYKVFPPVVFVMSILFNQIAIRYFNHLMSHTEYVPIVNTKGDVIGRSLAIEALNYKNAYINPVIRIAVSTH
GMLFLCDRPMNAILDKGKTDIPMECYLRYGESLTEGVNRLVHNALPHATEDFKPEFNIVYHFENEATNRLIYLFIVDIKD
DSILCTPRFKNSKLWSFKQIEENMGKGFFSSCFEDEYEHLKDVICIREKYRES
>Mature_373_residues
MDHKGTLSSAFNMSLGFIPVIISILLCEFITQDTAIYIGTGIGIVGIYLLLHRKGALIPNFILYIATGMLALLSLAALIP
GDYVPPGALPLTLEVSILIPMLILYMHKKRFINHFLRQIGSCNKRLYAQGAEAAVVSARFALIFGILHFIIISIVVASQD
PLSQTSMVILYKVFPPVVFVMSILFNQIAIRYFNHLMSHTEYVPIVNTKGDVIGRSLAIEALNYKNAYINPVIRIAVSTH
GMLFLCDRPMNAILDKGKTDIPMECYLRYGESLTEGVNRLVHNALPHATEDFKPEFNIVYHFENEATNRLIYLFIVDIKD
DSILCTPRFKNSKLWSFKQIEENMGKGFFSSCFEDEYEHLKDVICIREKYRES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42170; Mature: 42170

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHKGTLSSAFNMSLGFIPVIISILLCEFITQDTAIYIGTGIGIVGIYLLLHRKGALIPN
CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHH
FILYIATGMLALLSLAALIPGDYVPPGALPLTLEVSILIPMLILYMHKKRFINHFLRQIG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
SCNKRLYAQGAEAAVVSARFALIFGILHFIIISIVVASQDPLSQTSMVILYKVFPPVVFV
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
MSILFNQIAIRYFNHLMSHTEYVPIVNTKGDVIGRSLAIEALNYKNAYINPVIRIAVSTH
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHCHHEEEEEECC
GMLFLCDRPMNAILDKGKTDIPMECYLRYGESLTEGVNRLVHNALPHATEDFKPEFNIVY
CEEEEECCCHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
HFENEATNRLIYLFIVDIKDDSILCTPRFKNSKLWSFKQIEENMGKGFFSSCFEDEYEHL
EECCCCCCEEEEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
KDVICIREKYRES
HHHHHHHHHHCCC
>Mature Secondary Structure
MDHKGTLSSAFNMSLGFIPVIISILLCEFITQDTAIYIGTGIGIVGIYLLLHRKGALIPN
CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHH
FILYIATGMLALLSLAALIPGDYVPPGALPLTLEVSILIPMLILYMHKKRFINHFLRQIG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
SCNKRLYAQGAEAAVVSARFALIFGILHFIIISIVVASQDPLSQTSMVILYKVFPPVVFV
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
MSILFNQIAIRYFNHLMSHTEYVPIVNTKGDVIGRSLAIEALNYKNAYINPVIRIAVSTH
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHCHHEEEEEECC
GMLFLCDRPMNAILDKGKTDIPMECYLRYGESLTEGVNRLVHNALPHATEDFKPEFNIVY
CEEEEECCCHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
HFENEATNRLIYLFIVDIKDDSILCTPRFKNSKLWSFKQIEENMGKGFFSSCFEDEYEHL
EECCCCCCEEEEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
KDVICIREKYRES
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA