Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349569

Identifier: 29349569

GI number: 29349569

Start: 5468555

End: 5469157

Strand: Reverse

Name: 29349569

Synonym: BT_4161

Alternate gene names: NA

Gene position: 5469157-5468555 (Counterclockwise)

Preceding gene: 29349581

Following gene: 29349565

Centisome position: 87.36

GC content: 45.61

Gene sequence:

>603_bases
ATGGCAGCAGATTATGACTTTCGGCGAAAACCGAATGAAAAGGGAGACGGAGAAGTACAGCCTCTGTATCCCCGAATTGT
ATCCAAAGGAACCATTGACAGCAAACGGTTATTTCGTGAAATAGCCGAAGCCTCTTCTTTCACCGAGGGAGATTTGGCAG
GTATCATGGTAGCTTTTCAAGAGAAGGTATCCTATTATTTAAGTGAGGGGTATCATGTGAAACTGGGAGAAATCGGATAT
TTCTCCTCTAGTTTGAAAGCACGTCCGGTGATGGACAAGAAAGAGATCCGTTCGGTCTCCATCTCTTTCGACAACGTAAA
TTTCAGAGCTACTCCCTGGTTTCGCCGACGCAGTTCGGGGACGGTCACCCGTGCCAAATTCGGATTTCAAGAATCATCGA
ACTTGCCGGAAGAGACACGCCGTTCCCGACTGGAAGCCTTTTTAGCAAAGAATCACTTCATCACTCGAAGAGAATACTCT
CAGATTACGGGTTTATTGAAGGGAAAAGCACTACGGGAATTGAATCTTCTGGTAGAAAACGGAGTTCTTAACACTCGCGG
ATATGGGAACCGGGTGGTGTATTTAAAGCCTAATAATCAGTAG

Upstream 100 bases:

>100_bases
TCGAGCCTTGTCTACATGTTAAGGTTACTAGTGTTTGTACTAACACACGCGGTATCAATTGAGTAACAATCCTATTAACC
AACAAAAAACAAGTGACGCT

Downstream 100 bases:

>100_bases
ATTAAATCAGCAAAAGATACAATAAGGGTGATAATAGAAAAGAGGTTACTATTCTATTATCACCCTATTATCACCATCTA
TTGTCACCCGTTTTTCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MAADYDFRRKPNEKGDGEVQPLYPRIVSKGTIDSKRLFREIAEASSFTEGDLAGIMVAFQEKVSYYLSEGYHVKLGEIGY
FSSSLKARPVMDKKEIRSVSISFDNVNFRATPWFRRRSSGTVTRAKFGFQESSNLPEETRRSRLEAFLAKNHFITRREYS
QITGLLKGKALRELNLLVENGVLNTRGYGNRVVYLKPNNQ

Sequences:

>Translated_200_residues
MAADYDFRRKPNEKGDGEVQPLYPRIVSKGTIDSKRLFREIAEASSFTEGDLAGIMVAFQEKVSYYLSEGYHVKLGEIGY
FSSSLKARPVMDKKEIRSVSISFDNVNFRATPWFRRRSSGTVTRAKFGFQESSNLPEETRRSRLEAFLAKNHFITRREYS
QITGLLKGKALRELNLLVENGVLNTRGYGNRVVYLKPNNQ
>Mature_199_residues
AADYDFRRKPNEKGDGEVQPLYPRIVSKGTIDSKRLFREIAEASSFTEGDLAGIMVAFQEKVSYYLSEGYHVKLGEIGYF
SSSLKARPVMDKKEIRSVSISFDNVNFRATPWFRRRSSGTVTRAKFGFQESSNLPEETRRSRLEAFLAKNHFITRREYSQ
ITGLLKGKALRELNLLVENGVLNTRGYGNRVVYLKPNNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22889; Mature: 22758

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAADYDFRRKPNEKGDGEVQPLYPRIVSKGTIDSKRLFREIAEASSFTEGDLAGIMVAFQ
CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
EKVSYYLSEGYHVKLGEIGYFSSSLKARPVMDKKEIRSVSISFDNVNFRATPWFRRRSSG
HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHEEEEEEECCCCEEECCCHHCCCCC
TVTRAKFGFQESSNLPEETRRSRLEAFLAKNHFITRREYSQITGLLKGKALRELNLLVEN
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GVLNTRGYGNRVVYLKPNNQ
CEECCCCCCCEEEEEECCCC
>Mature Secondary Structure 
AADYDFRRKPNEKGDGEVQPLYPRIVSKGTIDSKRLFREIAEASSFTEGDLAGIMVAFQ
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
EKVSYYLSEGYHVKLGEIGYFSSSLKARPVMDKKEIRSVSISFDNVNFRATPWFRRRSSG
HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHEEEEEEECCCCEEECCCHHCCCCC
TVTRAKFGFQESSNLPEETRRSRLEAFLAKNHFITRREYSQITGLLKGKALRELNLLVEN
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GVLNTRGYGNRVVYLKPNNQ
CEECCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA