Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349553

Identifier: 29349553

GI number: 29349553

Start: 5441391

End: 5444165

Strand: Reverse

Name: 29349553

Synonym: BT_4145

Alternate gene names: NA

Gene position: 5444165-5441391 (Counterclockwise)

Preceding gene: 29349554

Following gene: 29349552

Centisome position: 86.96

GC content: 49.87

Gene sequence:

>2775_bases
ATGAACAAGAAACAACTGATACTCCTCTGTATGCTCGCAGCAGGTGGAAGCATACAAGCGCAACAGTGGCCGGATGCTCC
GGCAGAAGCCCGTCCCGGCACCAGATGGTGGTGGCTGGGAAGCGCTGTCGATGAAAAGAACCTGACTTACAATCTGGAAG
AATACGCACGTGCCGGCATGGGCGCCGTAGAAATCACTCCCATCTATGGTGTACAGGGCAATGACGCCAACGATATTCAG
TTCCTTTCTCCCCGCTGGATGGAAGTCCTCAAACACACACAGGCGGAAGGAAAACGCACCGGCATCGAGATCGATATGAA
CACCGGAACGGGATGGCCCTTCGGAGGACCGGAAGTCAGCATCGAAGACGCGGCAAGCAAAGCCATCTTCCAGACTTATG
ATATAGAAGGAGGCCAGGAAATCGTGCAAGATATCAATGTGACAGACAAGAAGCAACAACCTTATTCTGTCTTAAGCCGC
GTAATGGCATACGACGAAAACGGACGCTGCATCAACCTTACTTCCCATGTCAGGAAAGACAAACTGGTATGGAAAGCCCC
TGCCGGAAAATGGAAAGTGATAGCGCTGTATAACAGCAAGACACGTCAGAAAGTGAAACGTGCCGCCCCCGGAGGGGAAG
GATACGTAATGAACCATCTTTCCAAGACTGCCGTCAAGAACTATCTCTCCCGATTTAACCGTGCTTTCAAAAGTAGTAAG
ACGAGTTATCCGCATACATTCTTCAACGACTCTTACGAAGTCTATCAGGCAGACTGGACAGAAGACTTTCTGGATCAGTT
CGCCCGCAGACGGGGATATAAACTGGAAGAACATTTTCCGGAGTTTCTGGATGAAAACCGTCCGGAAATCAGCCGCCGCA
TCGTATCCGACTATCGGGAGACGATCTCCGACTTATTGCTGGAGAACTTCACCCGCCAATGGACGGACTGGGCACACAAG
AATGGCAGCATCACCCGTAATCAGGCACACGGATCGCCTGCCAACCTGATCGATGTCTACGCAGCCGTAGACATCCCCGA
ATGTGAAGGATTCGGTTTGTCCCAATTTCATATCAAAGGATTACGTCAGGATTCATTAACCAAAAAGAATGATTCAGACT
TGTCGATGCTGAAATATGCCTCTTCTGCCGCCCATATCGCCGGGAAACCTTATACTTCTACCGAAACATTTACCTGGCTG
ACGGAGCATTTCCGCACTTCTTTATCGCAATGCAAACCGGATATGGACCTGATGTTCGTCTCCGGCATTAATCATATGTT
CTTTCACGGCACTCCTTATTCGCCGAAAGAAGCCGAATGGCCGGGATGGTTGTTTTACGCCTCTATCAATATGAACCCGA
CGAACAGTATCTGGCACGATGCCCCTTCGTTCTTCGATTATATCACCCGTTGCCAGAGTTTCCTGCAAATGGGTAAACCG
GATAATGATTTCCTTATTTATCTGCCTGTCTATGATATGTGGGATGAGCAACCGGGACGTTTGCTGCTATTCAGCATTCA
TCACATGGCCAAGCTCGCCCCGAAATTTATAGATGCCATCCACCGTATCAATAACAGCGGATATGACGGAGACTATATCT
CGGACAACTTTATCCGCAGCACCCGTTTCAAAGACGGGCAGTTAATCACTTCCGGCGGAACCGGTTACAAAGCACTGGTC
GTACCCGCCGCCCATTTAATGCCGAATGACGTTCTGGCTCATCTGCTGAAACTGGCACAACAGGGAGCCACGATCGTATT
CCTCGAAAACTATCCGACGGACGTACCGGGATACGGTCAACTGGAACAGAAGCGCAAGACTTATCAGCAGACGCTGCAAA
AGTTACCTTCCGTTTCATTCTCCGAAACAACGGTTACTCCGGTAGGCAAAGGTAAGATTATTACAGGTACGGATTATGCA
CGTACTTTGGCAAGTTGTAATATTCCTCAGGAAGAAATGAAAACCAAGTTCGGACTGCAAGCCATCCGCAGAGTGAACGA
TAGCGGGCACCATTACTTTATCTCTTCTCTCCAAGATAAAGGAGTGAATGATTGGGTGACACTGGGAACCAAAGCCAAAG
CTGCCGCCCTCTTCAATCCCATGACAGGCGAATGCGGAGAAGCAAAGGTACGCCAGGCCGGAGAACAGACACAAGTCTAC
CTCCAACTGAAATCCGGCGAATCGGTGATTTTGCAGACTTATCAACAGCCGCTGCAAGCTGCCCGCCCCTGGAAATATAT
TCAGGAACAACCGTTCAGCCTCAGCCTGGATCATGGCTGGAAACTACACTTCGCCGAAAGCGAACCGAAGATAAAGGGTA
CGTTTGACATCGACCGCCCTTGCTCATGGACAGGCATCGACCATCCGGCAGCCAAGATTAACATGGGCAGCGGTGTTTAT
TCATTGGATATCGAATTGCCCGCTCTGCAAGCCGATGACTGGGTACTCGACTTGGGAGACGTACGCGAAAGTGCCCGTGT
CCGGATCAACGGGCAGGAAGCGGGCTGCGCATGGGCAGTACCTTACCAGCTACGAGTAGGTCATCTGCTGAAATCAGGAA
AAAACCACATCGAGATAGAAGTCACTAACCTCCCTGCCAACCGGATATCTGAACTGGACAGGCAGGGAGTGCAGTGGCGC
AAATTTAAAGAGATCAATATTGTCGATCTGAATTATCGTCCAGCCAACTATGGTCACTGGGCTCCCATGCCTTCGGGATT
AAATAGCGAGGTCCGGCTGATTCCGGTAGATTATTTATCTTTCAAGACACACTAA

Upstream 100 bases:

>100_bases
TCGACGGTGTCCGTTTCCACTTTGCACAGCCGGACGGACGTCCGCTCTTTGTGACCGACGACGCAGAAAACATTGAATAC
TATCATACACCCCAAGAATA

Downstream 100 bases:

>100_bases
AGTTATTATTTAAATCTACTTTCAGTTCAAGATAAGGCAATATAGTTCGGGCCTGACTAAAAAGTCAGTAGTATCTCCAA
TTCCCCTCCTTCGGGAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 924; Mature: 924

Protein sequence:

>924_residues
MNKKQLILLCMLAAGGSIQAQQWPDAPAEARPGTRWWWLGSAVDEKNLTYNLEEYARAGMGAVEITPIYGVQGNDANDIQ
FLSPRWMEVLKHTQAEGKRTGIEIDMNTGTGWPFGGPEVSIEDAASKAIFQTYDIEGGQEIVQDINVTDKKQQPYSVLSR
VMAYDENGRCINLTSHVRKDKLVWKAPAGKWKVIALYNSKTRQKVKRAAPGGEGYVMNHLSKTAVKNYLSRFNRAFKSSK
TSYPHTFFNDSYEVYQADWTEDFLDQFARRRGYKLEEHFPEFLDENRPEISRRIVSDYRETISDLLLENFTRQWTDWAHK
NGSITRNQAHGSPANLIDVYAAVDIPECEGFGLSQFHIKGLRQDSLTKKNDSDLSMLKYASSAAHIAGKPYTSTETFTWL
TEHFRTSLSQCKPDMDLMFVSGINHMFFHGTPYSPKEAEWPGWLFYASINMNPTNSIWHDAPSFFDYITRCQSFLQMGKP
DNDFLIYLPVYDMWDEQPGRLLLFSIHHMAKLAPKFIDAIHRINNSGYDGDYISDNFIRSTRFKDGQLITSGGTGYKALV
VPAAHLMPNDVLAHLLKLAQQGATIVFLENYPTDVPGYGQLEQKRKTYQQTLQKLPSVSFSETTVTPVGKGKIITGTDYA
RTLASCNIPQEEMKTKFGLQAIRRVNDSGHHYFISSLQDKGVNDWVTLGTKAKAAALFNPMTGECGEAKVRQAGEQTQVY
LQLKSGESVILQTYQQPLQAARPWKYIQEQPFSLSLDHGWKLHFAESEPKIKGTFDIDRPCSWTGIDHPAAKINMGSGVY
SLDIELPALQADDWVLDLGDVRESARVRINGQEAGCAWAVPYQLRVGHLLKSGKNHIEIEVTNLPANRISELDRQGVQWR
KFKEINIVDLNYRPANYGHWAPMPSGLNSEVRLIPVDYLSFKTH

Sequences:

>Translated_924_residues
MNKKQLILLCMLAAGGSIQAQQWPDAPAEARPGTRWWWLGSAVDEKNLTYNLEEYARAGMGAVEITPIYGVQGNDANDIQ
FLSPRWMEVLKHTQAEGKRTGIEIDMNTGTGWPFGGPEVSIEDAASKAIFQTYDIEGGQEIVQDINVTDKKQQPYSVLSR
VMAYDENGRCINLTSHVRKDKLVWKAPAGKWKVIALYNSKTRQKVKRAAPGGEGYVMNHLSKTAVKNYLSRFNRAFKSSK
TSYPHTFFNDSYEVYQADWTEDFLDQFARRRGYKLEEHFPEFLDENRPEISRRIVSDYRETISDLLLENFTRQWTDWAHK
NGSITRNQAHGSPANLIDVYAAVDIPECEGFGLSQFHIKGLRQDSLTKKNDSDLSMLKYASSAAHIAGKPYTSTETFTWL
TEHFRTSLSQCKPDMDLMFVSGINHMFFHGTPYSPKEAEWPGWLFYASINMNPTNSIWHDAPSFFDYITRCQSFLQMGKP
DNDFLIYLPVYDMWDEQPGRLLLFSIHHMAKLAPKFIDAIHRINNSGYDGDYISDNFIRSTRFKDGQLITSGGTGYKALV
VPAAHLMPNDVLAHLLKLAQQGATIVFLENYPTDVPGYGQLEQKRKTYQQTLQKLPSVSFSETTVTPVGKGKIITGTDYA
RTLASCNIPQEEMKTKFGLQAIRRVNDSGHHYFISSLQDKGVNDWVTLGTKAKAAALFNPMTGECGEAKVRQAGEQTQVY
LQLKSGESVILQTYQQPLQAARPWKYIQEQPFSLSLDHGWKLHFAESEPKIKGTFDIDRPCSWTGIDHPAAKINMGSGVY
SLDIELPALQADDWVLDLGDVRESARVRINGQEAGCAWAVPYQLRVGHLLKSGKNHIEIEVTNLPANRISELDRQGVQWR
KFKEINIVDLNYRPANYGHWAPMPSGLNSEVRLIPVDYLSFKTH
>Mature_924_residues
MNKKQLILLCMLAAGGSIQAQQWPDAPAEARPGTRWWWLGSAVDEKNLTYNLEEYARAGMGAVEITPIYGVQGNDANDIQ
FLSPRWMEVLKHTQAEGKRTGIEIDMNTGTGWPFGGPEVSIEDAASKAIFQTYDIEGGQEIVQDINVTDKKQQPYSVLSR
VMAYDENGRCINLTSHVRKDKLVWKAPAGKWKVIALYNSKTRQKVKRAAPGGEGYVMNHLSKTAVKNYLSRFNRAFKSSK
TSYPHTFFNDSYEVYQADWTEDFLDQFARRRGYKLEEHFPEFLDENRPEISRRIVSDYRETISDLLLENFTRQWTDWAHK
NGSITRNQAHGSPANLIDVYAAVDIPECEGFGLSQFHIKGLRQDSLTKKNDSDLSMLKYASSAAHIAGKPYTSTETFTWL
TEHFRTSLSQCKPDMDLMFVSGINHMFFHGTPYSPKEAEWPGWLFYASINMNPTNSIWHDAPSFFDYITRCQSFLQMGKP
DNDFLIYLPVYDMWDEQPGRLLLFSIHHMAKLAPKFIDAIHRINNSGYDGDYISDNFIRSTRFKDGQLITSGGTGYKALV
VPAAHLMPNDVLAHLLKLAQQGATIVFLENYPTDVPGYGQLEQKRKTYQQTLQKLPSVSFSETTVTPVGKGKIITGTDYA
RTLASCNIPQEEMKTKFGLQAIRRVNDSGHHYFISSLQDKGVNDWVTLGTKAKAAALFNPMTGECGEAKVRQAGEQTQVY
LQLKSGESVILQTYQQPLQAARPWKYIQEQPFSLSLDHGWKLHFAESEPKIKGTFDIDRPCSWTGIDHPAAKINMGSGVY
SLDIELPALQADDWVLDLGDVRESARVRINGQEAGCAWAVPYQLRVGHLLKSGKNHIEIEVTNLPANRISELDRQGVQWR
KFKEINIVDLNYRPANYGHWAPMPSGLNSEVRLIPVDYLSFKTH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 104646; Mature: 104646

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKQLILLCMLAAGGSIQAQQWPDAPAEARPGTRWWWLGSAVDEKNLTYNLEEYARAGM
CCCCEEEEEEEECCCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEECHHHHHHCCC
GAVEITPIYGVQGNDANDIQFLSPRWMEVLKHTQAEGKRTGIEIDMNTGTGWPFGGPEVS
CEEEEEEEEECCCCCCCCEEECCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEE
IEDAASKAIFQTYDIEGGQEIVQDINVTDKKQQPYSVLSRVMAYDENGRCINLTSHVRKD
HHHHHHHHHEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHCCC
KLVWKAPAGKWKVIALYNSKTRQKVKRAAPGGEGYVMNHLSKTAVKNYLSRFNRAFKSSK
CEEEECCCCCEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
TSYPHTFFNDSYEVYQADWTEDFLDQFARRRGYKLEEHFPEFLDENRPEISRRIVSDYRE
CCCCCCEECCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
TISDLLLENFTRQWTDWAHKNGSITRNQAHGSPANLIDVYAAVDIPECEGFGLSQFHIKG
HHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHCC
LRQDSLTKKNDSDLSMLKYASSAAHIAGKPYTSTETFTWLTEHFRTSLSQCKPDMDLMFV
CCHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE
SGINHMFFHGTPYSPKEAEWPGWLFYASINMNPTNSIWHDAPSFFDYITRCQSFLQMGKP
CCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHCCCC
DNDFLIYLPVYDMWDEQPGRLLLFSIHHMAKLAPKFIDAIHRINNSGYDGDYISDNFIRS
CCCEEEEEECHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
TRFKDGQLITSGGTGYKALVVPAAHLMPNDVLAHLLKLAQQGATIVFLENYPTDVPGYGQ
CCCCCCEEEECCCCCEEEEEECHHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
LEQKRKTYQQTLQKLPSVSFSETTVTPVGKGKIITGTDYARTLASCNIPQEEMKTKFGLQ
HHHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHH
AIRRVNDSGHHYFISSLQDKGVNDWVTLGTKAKAAALFNPMTGECGEAKVRQAGEQTQVY
HHHHHCCCCCEEEEECCCCCCCCCEEEECCCHHHHHHCCCCCCCCCHHHHHHCCCCEEEE
LQLKSGESVILQTYQQPLQAARPWKYIQEQPFSLSLDHGWKLHFAESEPKIKGTFDIDRP
EEECCCCHHHHHHHHHHHHHCCCHHHHHCCCCEEEECCCEEEEEECCCCCEEEEECCCCC
CSWTGIDHPAAKINMGSGVYSLDIELPALQADDWVLDLGDVRESARVRINGQEAGCAWAV
CCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCEEEEHHHCCCCCEEEECCCCCCEEEEC
PYQLRVGHLLKSGKNHIEIEVTNLPANRISELDRQGVQWRKFKEINIVDLNYRPANYGHW
CHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCEEEECEEEEEEECCCCCCCCCC
APMPSGLNSEVRLIPVDYLSFKTH
CCCCCCCCCCEEEEEEEHCCCCCC
>Mature Secondary Structure
MNKKQLILLCMLAAGGSIQAQQWPDAPAEARPGTRWWWLGSAVDEKNLTYNLEEYARAGM
CCCCEEEEEEEECCCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEECHHHHHHCCC
GAVEITPIYGVQGNDANDIQFLSPRWMEVLKHTQAEGKRTGIEIDMNTGTGWPFGGPEVS
CEEEEEEEEECCCCCCCCEEECCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEE
IEDAASKAIFQTYDIEGGQEIVQDINVTDKKQQPYSVLSRVMAYDENGRCINLTSHVRKD
HHHHHHHHHEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHCCC
KLVWKAPAGKWKVIALYNSKTRQKVKRAAPGGEGYVMNHLSKTAVKNYLSRFNRAFKSSK
CEEEECCCCCEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
TSYPHTFFNDSYEVYQADWTEDFLDQFARRRGYKLEEHFPEFLDENRPEISRRIVSDYRE
CCCCCCEECCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
TISDLLLENFTRQWTDWAHKNGSITRNQAHGSPANLIDVYAAVDIPECEGFGLSQFHIKG
HHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHCC
LRQDSLTKKNDSDLSMLKYASSAAHIAGKPYTSTETFTWLTEHFRTSLSQCKPDMDLMFV
CCHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE
SGINHMFFHGTPYSPKEAEWPGWLFYASINMNPTNSIWHDAPSFFDYITRCQSFLQMGKP
CCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHCCCC
DNDFLIYLPVYDMWDEQPGRLLLFSIHHMAKLAPKFIDAIHRINNSGYDGDYISDNFIRS
CCCEEEEEECHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
TRFKDGQLITSGGTGYKALVVPAAHLMPNDVLAHLLKLAQQGATIVFLENYPTDVPGYGQ
CCCCCCEEEECCCCCEEEEEECHHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
LEQKRKTYQQTLQKLPSVSFSETTVTPVGKGKIITGTDYARTLASCNIPQEEMKTKFGLQ
HHHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHH
AIRRVNDSGHHYFISSLQDKGVNDWVTLGTKAKAAALFNPMTGECGEAKVRQAGEQTQVY
HHHHHCCCCCEEEEECCCCCCCCCEEEECCCHHHHHHCCCCCCCCCHHHHHHCCCCEEEE
LQLKSGESVILQTYQQPLQAARPWKYIQEQPFSLSLDHGWKLHFAESEPKIKGTFDIDRP
EEECCCCHHHHHHHHHHHHHCCCHHHHHCCCCEEEECCCEEEEEECCCCCEEEEECCCCC
CSWTGIDHPAAKINMGSGVYSLDIELPALQADDWVLDLGDVRESARVRINGQEAGCAWAV
CCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCEEEEHHHCCCCCEEEECCCCCCEEEEC
PYQLRVGHLLKSGKNHIEIEVTNLPANRISELDRQGVQWRKFKEINIVDLNYRPANYGHW
CHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCEEEECEEEEEEECCCCCCCCCC
APMPSGLNSEVRLIPVDYLSFKTH
CCCCCCCCCCEEEEEEEHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA