| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349428
Identifier: 29349428
GI number: 29349428
Start: 5237118
End: 5237492
Strand: Reverse
Name: 29349428
Synonym: BT_4020
Alternate gene names: NA
Gene position: 5237492-5237118 (Counterclockwise)
Preceding gene: 29349429
Following gene: 29349427
Centisome position: 83.66
GC content: 42.4
Gene sequence:
>375_bases ATGAGCAGAGGCATAATAACAATCAGTGAAACGGATGCAGTCACTATGCCAACCGCACCCGTATGGATGATGCAATTTGA GATTGCCGACCTGTTCGGGGTGTTCTCATGCAATGTCCGCAAGGCAATACGGGCAATCTATAAGAACAATGAACTGAATG AAGCCGATACGATGCGATATATCAGGCAACCGGATGGTATCAGTTATGACGTTTACAACCTTGAACTGGTTATAGCCATT GCATTCAGGATATGCAGTAAAGAAAGTGCTTTGTTCAGACGGTTTATAATAAATGAAATCAGCACTACCAAAAGAGAAAC ACCTGTTACGTTGTTTGTTTCCTGTGGCAGGAGTAATAACCGATGGTATAGTTGA
Upstream 100 bases:
>100_bases AAAATTTCCAAAGATATGGACAAACTGATGGAGCGAAGAAAGGAAATATCGTCTGGCGAAAAGAAGAAATAGCAAATAAT CATCATAAAATAAAGGGATT
Downstream 100 bases:
>100_bases GGTTCATCCCGTCAGTAACTTGTTTCCGTTGCCACACGTTTGAAAGGCATCCGACAACGAAAAACAAGCAACTGATGGGT AATTATAAGAGCAGAAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSRGIITISETDAVTMPTAPVWMMQFEIADLFGVFSCNVRKAIRAIYKNNELNEADTMRYIRQPDGISYDVYNLELVIAI AFRICSKESALFRRFIINEISTTKRETPVTLFVSCGRSNNRWYS
Sequences:
>Translated_124_residues MSRGIITISETDAVTMPTAPVWMMQFEIADLFGVFSCNVRKAIRAIYKNNELNEADTMRYIRQPDGISYDVYNLELVIAI AFRICSKESALFRRFIINEISTTKRETPVTLFVSCGRSNNRWYS >Mature_123_residues SRGIITISETDAVTMPTAPVWMMQFEIADLFGVFSCNVRKAIRAIYKNNELNEADTMRYIRQPDGISYDVYNLELVIAIA FRICSKESALFRRFIINEISTTKRETPVTLFVSCGRSNNRWYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14304; Mature: 14172
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRGIITISETDAVTMPTAPVWMMQFEIADLFGVFSCNVRKAIRAIYKNNELNEADTMRY CCCCEEEEECCCEEECCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHH IRQPDGISYDVYNLELVIAIAFRICSKESALFRRFIINEISTTKRETPVTLFVSCGRSNN HCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC RWYS CCCC >Mature Secondary Structure SRGIITISETDAVTMPTAPVWMMQFEIADLFGVFSCNVRKAIRAIYKNNELNEADTMRY CCCEEEEECCCEEECCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHH IRQPDGISYDVYNLELVIAIAFRICSKESALFRRFIINEISTTKRETPVTLFVSCGRSNN HCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC RWYS CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA