Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349426

Identifier: 29349426

GI number: 29349426

Start: 5235315

End: 5235782

Strand: Reverse

Name: 29349426

Synonym: BT_4018

Alternate gene names: NA

Gene position: 5235782-5235315 (Counterclockwise)

Preceding gene: 29349427

Following gene: 29349425

Centisome position: 83.63

GC content: 53.85

Gene sequence:

>468_bases
ATGAAAAAAGAACCAAACATTACAGAGCGTCAAGCTCGTGAAATCGTGGAAAAAATGGGGCGCAGGGAACCCTACACCTC
CAAGTCGATAGACGACTTCTACAGGAGTATCGGTCTGGAACCGGAGGAGCCGGAACAGCCCGGCAAGACCGTCACGGAAG
AAGCAGAAATTCATATGGCAGAAGAACCGTCAGGAGTGGCGAGCGGAGAAGCGGTAATGCCGCAGAAGCGTATCAGTGGC
AAACAGCGCAGGCTGTCTTTAGAAGAGTACCGCACCACCTATCTCAAAGTTCCCAAAATTATCAACCGCAAGCCCGTGTT
CGTCAGTGAGACGGTGCGTGACGAGTTGGACAGGGTTGTCCGCTACCTCGGAGGGAAGGGCATGAGCGCATCCGGACTTA
TAGAGAACCTTGTCCGCCTGCACCTCGAGGCCTACCGGAATGACATCGAGCAATGGCGCAAACTCTGA

Upstream 100 bases:

>100_bases
TGCTTGACTGACTGTATTAAAGCACCTTACTTCGCTCCCGATAATCGGTCGAGGTATAGACCAAGACCACATTCAATAAC
TTAATCAATTTGTTTTTACA

Downstream 100 bases:

>100_bases
CGGGATTACGGTGGAACAGGTTGAGCCGTTGGATGTACTCCATCGGTTCGACCGATACACAAAGTGAGTTATTACACTCG
GAAATCAATCCGACAGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKKEPNITERQAREIVEKMGRREPYTSKSIDDFYRSIGLEPEEPEQPGKTVTEEAEIHMAEEPSGVASGEAVMPQKRISG
KQRRLSLEEYRTTYLKVPKIINRKPVFVSETVRDELDRVVRYLGGKGMSASGLIENLVRLHLEAYRNDIEQWRKL

Sequences:

>Translated_155_residues
MKKEPNITERQAREIVEKMGRREPYTSKSIDDFYRSIGLEPEEPEQPGKTVTEEAEIHMAEEPSGVASGEAVMPQKRISG
KQRRLSLEEYRTTYLKVPKIINRKPVFVSETVRDELDRVVRYLGGKGMSASGLIENLVRLHLEAYRNDIEQWRKL
>Mature_155_residues
MKKEPNITERQAREIVEKMGRREPYTSKSIDDFYRSIGLEPEEPEQPGKTVTEEAEIHMAEEPSGVASGEAVMPQKRISG
KQRRLSLEEYRTTYLKVPKIINRKPVFVSETVRDELDRVVRYLGGKGMSASGLIENLVRLHLEAYRNDIEQWRKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17946; Mature: 17946

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEPNITERQAREIVEKMGRREPYTSKSIDDFYRSIGLEPEEPEQPGKTVTEEAEIHMA
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCC
EEPSGVASGEAVMPQKRISGKQRRLSLEEYRTTYLKVPKIINRKPVFVSETVRDELDRVV
CCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RYLGGKGMSASGLIENLVRLHLEAYRNDIEQWRKL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKEPNITERQAREIVEKMGRREPYTSKSIDDFYRSIGLEPEEPEQPGKTVTEEAEIHMA
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCC
EEPSGVASGEAVMPQKRISGKQRRLSLEEYRTTYLKVPKIINRKPVFVSETVRDELDRVV
CCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RYLGGKGMSASGLIENLVRLHLEAYRNDIEQWRKL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA