Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349402

Identifier: 29349402

GI number: 29349402

Start: 5202936

End: 5205167

Strand: Reverse

Name: 29349402

Synonym: BT_3994

Alternate gene names: NA

Gene position: 5205167-5202936 (Counterclockwise)

Preceding gene: 29349403

Following gene: 29349401

Centisome position: 83.14

GC content: 48.79

Gene sequence:

>2232_bases
ATGAAAACACCTATTTACCTACTTCTAATCGTTTGTATTTTTGCATCCTGCAACACCAAACAGACACAAGCTGAAATTGA
TTACACATCGTATGTAAATCCTTTTATTGGCACCGATTTCACAGGAAACACTTATCCCGGCGCACAAGCCCCCTTCGGTA
TGGTGCAGCTCAGCCCGGACAACGGACTTCCGGGATGGGACCGCATCTCCGGCTATTTTTATCCGGACAGCACCATCGCC
GGCTTCAGCCATACCCACCTTTCGGGAACAGGTGCAGGCGACTTGTACGACATCTCTTTCATGCCGGTCACACTGCCCTA
CAAAGAGGCAGAAGCGCCGCTGGGCATCTACTCCAAGTTTTCTCACGATGAAGAGAGCGCCTATGCAGGCTACTATCAAG
TACGTCTGAAAGACTACCATATCAATGTGGAACTGACCGCAACCGAACGTTGTGGCATCCAGCGATACACCTTCCCCAAA
GCCGAAGCCGCCATCTTCCTGAATCTGAAGAAAGCCATGAACTGGGACTTCACAAACGATTCGCACATCGAAGTAGTGGA
CTCTGTGACGATTCAAGGATACCGTTACTCCGACGGCTGGGCACGCGACCAGCGAATCTACTTCCGCACCCGCTTCTCGA
AGCCTTTCGACAAGGTGGAACTGGATACGACTGCCATTATCAAAGACAAGCAACACATCGGTACGGCTGTCATCGCACGT
TTTGACTTCCATACCGAAGAAGGAGAACAGATTCTCGTCAATACCGCCATTTCCGGCGTCAGCATGGAAGGCGCAGCCAA
GAACCTGCAAGCCGAAGTGCCCGAAAATGACTTCGACAAGTATCTGGCAGAAACAAAAGCAAACTGGAACCGCCAACTGG
GAAAGATCGAAGTCGAGGGTGACAATCAAGACGATAAAGTAAACTTTTATACGGCTCTGTACCACTCGATGATCGCACCT
ACGATTTACAGTGACGTAGACGGAGCCTATTACGGTCCCGACAAAAAAGTACATCAGAGTGACGGCTGGGTGAATTACAG
CACTTTCTCCCTTTGGGATACCTACCGTGCCGCCCATCCCCTTTTCACATATACCGAACCGGAACGTGTCAACGACATGG
TAAAATCCTTCATCGCCTTCTTTGAACAGAACGGACGCCTGCCCGTATGGAACTTCTACGGGAGTGAAACCGATATGATG
ATCGGCTATCATGCCGTTCCCGTGATTGTAGACGCTTATCTGAAAGGTATAGGCAACTTTGATGCGGAGAAAGCACTGGC
CGCCTGCGTAGCTACCGCCAACTTGGATAACTACCGGGGCATCGGGCTATACAAGCAATTAGGCTATATTCCTTACAACG
TGACAGATCATTACAATGCCGAAAATTGGTCACTGTCCAAAACACTGGAATATGCATTTGACGATTACTGCATCGCTGAG
ATGGCGAACAAGATGGGCAAGAAGGAGATAGCGGACGAATTCTACAAACGTTCTCAGAACTACAAGAATGTTTACAACCC
GGCCACTTCGTTCATGCAGCCGCGTGACGATAAAGGAAACTTTATCAAAGACTTCAAAGCCGACGAATACACTCCGCATA
TCTGCGAAAGCAACGGCTGGCAATACTTCTGGTCCGTGCAGCATGACATAGATGGTCTGATTGATCTCACAGGAGGTAAA
AACCGCTTTGCAGAGAAACTGGACAGCATGTTTACCTACCATCCGGCAGCCGACGAAGAACTTCCCATCTTCAGCACGGG
AATGATCGGGCAATATGCTCACGGCAATGAGCCGAGCCATCACGTAATCTATCTCTTCAATGCCGTAGGACAACAGAACC
TGACACAGAAATACGTTGCCAAGGTAATGAACGAGCTTTACAAGAACGAGCCTGCCGGTCTTTGCGGAAACGAAGACTGC
GGACAAATGTCTGCCTGGTACGTATTCAGCGCGATGGGATTCTATCCCGTCAATCCGGTCAGCGGAAAGTATGAAATAGG
TACTCCCCTGTTCCCGGAGATGAAGTTGCATCTGGCTAACGGAAAGACATTTACAGTACTTGCTCCCAAAGTGAGCAAAG
AGAATATTTACATTCAATCTATCAAAGTAGACGGTCAACCGTACAACAAGACCTACCTTACCCATGAACAGATTATGAGC
GGTACCACCGTCGAATTTGAAATGGGGAATACTCCCTTAGTGGAAGTCGAATTTGAAGAACAGACCCAGTAG

Upstream 100 bases:

>100_bases
AACTCAATTATCACAACTTTTTCCTACCTTTGTAAACAGATTAATTATTTTTCTTATCCTTCAAATAATAAAATAAGTAA
TCACCAATACCCGTACACCG

Downstream 100 bases:

>100_bases
GTCCACCTAAACTAATCTATCGGAAAAATGAATGAAAACTTCGACTTAACCTACAAAGCTCTATTCCGCAGGTACTACCC
CAGCCTGATATTCTATGCCA

Product: putative alpha-1,2-mannosidase

Products: NA

Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Sugar Hydrolase; Secreted Protein; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Immunoreactive; Exported Alpha-1 2-Mannosidase; Antigen; Alpha-1 2-Mannosidase Protein; Lipoprotein; Mannosidase

Number of amino acids: Translated: 743; Mature: 743

Protein sequence:

>743_residues
MKTPIYLLLIVCIFASCNTKQTQAEIDYTSYVNPFIGTDFTGNTYPGAQAPFGMVQLSPDNGLPGWDRISGYFYPDSTIA
GFSHTHLSGTGAGDLYDISFMPVTLPYKEAEAPLGIYSKFSHDEESAYAGYYQVRLKDYHINVELTATERCGIQRYTFPK
AEAAIFLNLKKAMNWDFTNDSHIEVVDSVTIQGYRYSDGWARDQRIYFRTRFSKPFDKVELDTTAIIKDKQHIGTAVIAR
FDFHTEEGEQILVNTAISGVSMEGAAKNLQAEVPENDFDKYLAETKANWNRQLGKIEVEGDNQDDKVNFYTALYHSMIAP
TIYSDVDGAYYGPDKKVHQSDGWVNYSTFSLWDTYRAAHPLFTYTEPERVNDMVKSFIAFFEQNGRLPVWNFYGSETDMM
IGYHAVPVIVDAYLKGIGNFDAEKALAACVATANLDNYRGIGLYKQLGYIPYNVTDHYNAENWSLSKTLEYAFDDYCIAE
MANKMGKKEIADEFYKRSQNYKNVYNPATSFMQPRDDKGNFIKDFKADEYTPHICESNGWQYFWSVQHDIDGLIDLTGGK
NRFAEKLDSMFTYHPAADEELPIFSTGMIGQYAHGNEPSHHVIYLFNAVGQQNLTQKYVAKVMNELYKNEPAGLCGNEDC
GQMSAWYVFSAMGFYPVNPVSGKYEIGTPLFPEMKLHLANGKTFTVLAPKVSKENIYIQSIKVDGQPYNKTYLTHEQIMS
GTTVEFEMGNTPLVEVEFEEQTQ

Sequences:

>Translated_743_residues
MKTPIYLLLIVCIFASCNTKQTQAEIDYTSYVNPFIGTDFTGNTYPGAQAPFGMVQLSPDNGLPGWDRISGYFYPDSTIA
GFSHTHLSGTGAGDLYDISFMPVTLPYKEAEAPLGIYSKFSHDEESAYAGYYQVRLKDYHINVELTATERCGIQRYTFPK
AEAAIFLNLKKAMNWDFTNDSHIEVVDSVTIQGYRYSDGWARDQRIYFRTRFSKPFDKVELDTTAIIKDKQHIGTAVIAR
FDFHTEEGEQILVNTAISGVSMEGAAKNLQAEVPENDFDKYLAETKANWNRQLGKIEVEGDNQDDKVNFYTALYHSMIAP
TIYSDVDGAYYGPDKKVHQSDGWVNYSTFSLWDTYRAAHPLFTYTEPERVNDMVKSFIAFFEQNGRLPVWNFYGSETDMM
IGYHAVPVIVDAYLKGIGNFDAEKALAACVATANLDNYRGIGLYKQLGYIPYNVTDHYNAENWSLSKTLEYAFDDYCIAE
MANKMGKKEIADEFYKRSQNYKNVYNPATSFMQPRDDKGNFIKDFKADEYTPHICESNGWQYFWSVQHDIDGLIDLTGGK
NRFAEKLDSMFTYHPAADEELPIFSTGMIGQYAHGNEPSHHVIYLFNAVGQQNLTQKYVAKVMNELYKNEPAGLCGNEDC
GQMSAWYVFSAMGFYPVNPVSGKYEIGTPLFPEMKLHLANGKTFTVLAPKVSKENIYIQSIKVDGQPYNKTYLTHEQIMS
GTTVEFEMGNTPLVEVEFEEQTQ
>Mature_743_residues
MKTPIYLLLIVCIFASCNTKQTQAEIDYTSYVNPFIGTDFTGNTYPGAQAPFGMVQLSPDNGLPGWDRISGYFYPDSTIA
GFSHTHLSGTGAGDLYDISFMPVTLPYKEAEAPLGIYSKFSHDEESAYAGYYQVRLKDYHINVELTATERCGIQRYTFPK
AEAAIFLNLKKAMNWDFTNDSHIEVVDSVTIQGYRYSDGWARDQRIYFRTRFSKPFDKVELDTTAIIKDKQHIGTAVIAR
FDFHTEEGEQILVNTAISGVSMEGAAKNLQAEVPENDFDKYLAETKANWNRQLGKIEVEGDNQDDKVNFYTALYHSMIAP
TIYSDVDGAYYGPDKKVHQSDGWVNYSTFSLWDTYRAAHPLFTYTEPERVNDMVKSFIAFFEQNGRLPVWNFYGSETDMM
IGYHAVPVIVDAYLKGIGNFDAEKALAACVATANLDNYRGIGLYKQLGYIPYNVTDHYNAENWSLSKTLEYAFDDYCIAE
MANKMGKKEIADEFYKRSQNYKNVYNPATSFMQPRDDKGNFIKDFKADEYTPHICESNGWQYFWSVQHDIDGLIDLTGGK
NRFAEKLDSMFTYHPAADEELPIFSTGMIGQYAHGNEPSHHVIYLFNAVGQQNLTQKYVAKVMNELYKNEPAGLCGNEDC
GQMSAWYVFSAMGFYPVNPVSGKYEIGTPLFPEMKLHLANGKTFTVLAPKVSKENIYIQSIKVDGQPYNKTYLTHEQIMS
GTTVEFEMGNTPLVEVEFEEQTQ

Specific function: Unknown

COG id: COG3537

COG function: function code G; Putative alpha-1,2-mannosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84336; Mature: 84336

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTPIYLLLIVCIFASCNTKQTQAEIDYTSYVNPFIGTDFTGNTYPGAQAPFGMVQLSPD
CCCHHHHHHHHHHHHCCCCCCCEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCC
NGLPGWDRISGYFYPDSTIAGFSHTHLSGTGAGDLYDISFMPVTLPYKEAEAPLGIYSKF
CCCCCHHHCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCHHCCCCCCHHHHC
SHDEESAYAGYYQVRLKDYHINVELTATERCGIQRYTFPKAEAAIFLNLKKAMNWDFTND
CCCCCCCCCCEEEEEEEEEEEEEEEEEHHCCCCEEECCCCCCEEEEEEEHHHCCCCCCCC
SHIEVVDSVTIQGYRYSDGWARDQRIYFRTRFSKPFDKVELDTTAIIKDKQHIGTAVIAR
CCEEEEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCEECCEEEEECCHHHHCEEEEEE
FDFHTEEGEQILVNTAISGVSMEGAAKNLQAEVPENDFDKYLAETKANWNRQLGKIEVEG
EECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECC
DNQDDKVNFYTALYHSMIAPTIYSDVDGAYYGPDKKVHQSDGWVNYSTFSLWDTYRAAHP
CCCCCCCHHHHHHHHHHHCCHHHHCCCCCEECCCCCEECCCCEEEEEEEEHHHHHHHCCC
LFTYTEPERVNDMVKSFIAFFEQNGRLPVWNFYGSETDMMIGYHAVPVIVDAYLKGIGNF
CEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHCCCC
DAEKALAACVATANLDNYRGIGLYKQLGYIPYNVTDHYNAENWSLSKTLEYAFDDYCIAE
CHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHH
MANKMGKKEIADEFYKRSQNYKNVYNPATSFMQPRDDKGNFIKDFKADEYTPHICESNGW
HHHHHCHHHHHHHHHHHCCCCCHHHCCHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCC
QYFWSVQHDIDGLIDLTGGKNRFAEKLDSMFTYHPAADEELPIFSTGMIGQYAHGNEPSH
EEEEEEECCCCCEEECCCCCHHHHHHHHHHEEECCCCCCCCCEEECCCCCCCCCCCCCCC
HVIYLFNAVGQQNLTQKYVAKVMNELYKNEPAGLCGNEDCGQMSAWYVFSAMGFYPVNPV
EEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCC
SGKYEIGTPLFPEMKLHLANGKTFTVLAPKVSKENIYIQSIKVDGQPYNKTYLTHEQIMS
CCCEECCCCCCCCEEEEEECCCEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEHHHHHC
GTTVEFEMGNTPLVEVEFEEQTQ
CCEEEEECCCCCEEEEEECCCCC
>Mature Secondary Structure
MKTPIYLLLIVCIFASCNTKQTQAEIDYTSYVNPFIGTDFTGNTYPGAQAPFGMVQLSPD
CCCHHHHHHHHHHHHCCCCCCCEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCC
NGLPGWDRISGYFYPDSTIAGFSHTHLSGTGAGDLYDISFMPVTLPYKEAEAPLGIYSKF
CCCCCHHHCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCHHCCCCCCHHHHC
SHDEESAYAGYYQVRLKDYHINVELTATERCGIQRYTFPKAEAAIFLNLKKAMNWDFTND
CCCCCCCCCCEEEEEEEEEEEEEEEEEHHCCCCEEECCCCCCEEEEEEEHHHCCCCCCCC
SHIEVVDSVTIQGYRYSDGWARDQRIYFRTRFSKPFDKVELDTTAIIKDKQHIGTAVIAR
CCEEEEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCEECCEEEEECCHHHHCEEEEEE
FDFHTEEGEQILVNTAISGVSMEGAAKNLQAEVPENDFDKYLAETKANWNRQLGKIEVEG
EECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECC
DNQDDKVNFYTALYHSMIAPTIYSDVDGAYYGPDKKVHQSDGWVNYSTFSLWDTYRAAHP
CCCCCCCHHHHHHHHHHHCCHHHHCCCCCEECCCCCEECCCCEEEEEEEEHHHHHHHCCC
LFTYTEPERVNDMVKSFIAFFEQNGRLPVWNFYGSETDMMIGYHAVPVIVDAYLKGIGNF
CEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHCCCC
DAEKALAACVATANLDNYRGIGLYKQLGYIPYNVTDHYNAENWSLSKTLEYAFDDYCIAE
CHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHH
MANKMGKKEIADEFYKRSQNYKNVYNPATSFMQPRDDKGNFIKDFKADEYTPHICESNGW
HHHHHCHHHHHHHHHHHCCCCCHHHCCHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCC
QYFWSVQHDIDGLIDLTGGKNRFAEKLDSMFTYHPAADEELPIFSTGMIGQYAHGNEPSH
EEEEEEECCCCCEEECCCCCHHHHHHHHHHEEECCCCCCCCCEEECCCCCCCCCCCCCCC
HVIYLFNAVGQQNLTQKYVAKVMNELYKNEPAGLCGNEDCGQMSAWYVFSAMGFYPVNPV
EEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCC
SGKYEIGTPLFPEMKLHLANGKTFTVLAPKVSKENIYIQSIKVDGQPYNKTYLTHEQIMS
CCCEECCCCCCCCEEEEEECCCEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEHHHHHC
GTTVEFEMGNTPLVEVEFEEQTQ
CCEEEEECCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA