Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346704

Identifier: 29346704

GI number: 29346704

Start: 1613195

End: 1614856

Strand: Reverse

Name: 29346704

Synonym: BT_1294

Alternate gene names: NA

Gene position: 1614856-1613195 (Counterclockwise)

Preceding gene: 29346705

Following gene: 29346703

Centisome position: 25.79

GC content: 44.46

Gene sequence:

>1662_bases
ATGGTAAAAGATTTATTAACCCCCGATTATATCTTCGAGTCCAGCTGGGAAGTATGTAATAAAGTGGGAGGGATATACAC
CGTATTGTCGACACGGGCGAATACATTGCAGGAAAAATTCCGCGACAGAATTTTTTTCATAGGTCCTGATGTGTGGCAAG
GAAAAGAGAACCCTCTATTCATCGAGTCGGATAATCTGTGCGCTGACTGGAAAAAGCACGCATTCAAAAACGATCATCTT
TCCGTCCGTGTAGGACGATGGAATATACCCGGTGAACCCATTGTCATCCTTGTTGATTTCCAACCTTTTTTTGAACAGAA
GAACGAAATTTACACAGAAATGTGGAATCGTTTTCAAGTAGACTCGTTGCACGCTTATGGCGATTACGACGAGGCTTCGA
TGTTTTCGTATGCTGCCGGAAAAGTAGTAGAGAGTTTCTACCGCTACAACCTGACAGAAACGGATAAGGTGGTATATCAG
GCACATGAATGGATGACCGGAATGGGAGCACTTTATGTACAGGAAGCTGTCCCCGAAGTGGCTACTATTTTTACAACCCA
CGCTACTTCCATCGGACGTTCGATAGCCGGCAATCATAAGCCGCTGTATGACTATCTGTTTGCTTATAACGGTGACCAGA
TGGCGCAGGAACTGAATATGCAGTCAAAGCACTCTATTGAGAAGCAGACGGCGCATTATGTAGACTGTTTTACGACAGTA
AGTGAAATCACGAATAACGAGTGCAAGGAATTGCTCGACAAACCGGCAGACGTAGTACTGATGAACGGTTTCGAAGACGA
TTTCGTACCTAAAGGCAGTACATTTACCGGAAAACGTAAACGTGCCCGCTCATTGATGTTGAACGTAGCCAATAAATTGT
TGGGAACAAATCTGGATGACGATACGTTAATTATCGGTACCAGTGGTCGATATGAATTCAAGAACAAGGGTATTGACGTA
TTCCTGGAGTCATTGAACCGTCTGAACAGGGATAAAAAGCTCCATAAGAACGTATTGGCGTTTATCAATGTCCCCGGTTG
GGTAGGAGATCCCCGTGAAGACTTGCAGGAACGTCTGAAAAGCAAAGAAAAATTTGATACACCGCTTGAAGTTCCTTTCA
TCACTCATTGGCTGCACAATATGACGCATGACCAAGTGCTGGATATGCTGAAATATCTGGGGATGGGCAACCGTCCCGAT
GATAAAGTAAAGGTGATTTTTGTGCCTTGCTATCTGGACGGGCGTGATGGTATCCTGAATAAAGAGTATTATGATATATT
GCTGGGACAGGATTTGAGTGTATATGCTTCCTATTACGAACCGTGGGGATATACTCCGCTGGAAAGTGTAGCGTTCCGTG
TGCCTACCATTACTACTGATCTGGCAGGTTTTGGCCTTTGGGTGAACAGCCTGAAGAATCAGCATGGCATCAATGATGGA
GTGGAAGTGCTGCATCGTTCGGACTATAATGATTCGGAAGTGGCGGATGGCATCAAAGATACGATTACGCTGTTTGCAGA
TAAGTCGGAAAAAGAAGTGAAGGAGATCCGTAAGCATGCGGCAGATGTTGCAGAGCAGGCATTGTGGAAACACTTCATTC
AATATTATTACGAGGCTTATGATATTGCCTTGCGCAATGCCATGAAGCGTCAGTTAGGCTAA

Upstream 100 bases:

>100_bases
TTTCCTCTTATTAACTCATATTTTTCGCATAAAGTATTATTTTTCAAAGAATAATGCGTACTTTTGCACTCGCATACTAA
AAAGAGTTTTAATATATTAT

Downstream 100 bases:

>100_bases
AGAAATATTTTATTATCAATAAGTAAACAAAAACATTATGAAAATTAAAGTTAGTAATGTGAATACTCCGAACTGGAAAG
AGGTTACAGTGAAGTCACGT

Product: glycogen [starch] synthase, glycosyltransferase

Products: NA

Alternate protein names: Alpha-Glucan Phosphorylase; Glycogen(Starch) Synthase; Glycosyltransferase Family Alpha-Glycosyltransferase; Glycogen Synthase Glycosyltransferase Family 3 Protein; Glycogen Synthase Family Protein; Glycogen Synthase /Glycogen Phosphorylase; Carbohydrate Phosphorylase Family Protein

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MVKDLLTPDYIFESSWEVCNKVGGIYTVLSTRANTLQEKFRDRIFFIGPDVWQGKENPLFIESDNLCADWKKHAFKNDHL
SVRVGRWNIPGEPIVILVDFQPFFEQKNEIYTEMWNRFQVDSLHAYGDYDEASMFSYAAGKVVESFYRYNLTETDKVVYQ
AHEWMTGMGALYVQEAVPEVATIFTTHATSIGRSIAGNHKPLYDYLFAYNGDQMAQELNMQSKHSIEKQTAHYVDCFTTV
SEITNNECKELLDKPADVVLMNGFEDDFVPKGSTFTGKRKRARSLMLNVANKLLGTNLDDDTLIIGTSGRYEFKNKGIDV
FLESLNRLNRDKKLHKNVLAFINVPGWVGDPREDLQERLKSKEKFDTPLEVPFITHWLHNMTHDQVLDMLKYLGMGNRPD
DKVKVIFVPCYLDGRDGILNKEYYDILLGQDLSVYASYYEPWGYTPLESVAFRVPTITTDLAGFGLWVNSLKNQHGINDG
VEVLHRSDYNDSEVADGIKDTITLFADKSEKEVKEIRKHAADVAEQALWKHFIQYYYEAYDIALRNAMKRQLG

Sequences:

>Translated_553_residues
MVKDLLTPDYIFESSWEVCNKVGGIYTVLSTRANTLQEKFRDRIFFIGPDVWQGKENPLFIESDNLCADWKKHAFKNDHL
SVRVGRWNIPGEPIVILVDFQPFFEQKNEIYTEMWNRFQVDSLHAYGDYDEASMFSYAAGKVVESFYRYNLTETDKVVYQ
AHEWMTGMGALYVQEAVPEVATIFTTHATSIGRSIAGNHKPLYDYLFAYNGDQMAQELNMQSKHSIEKQTAHYVDCFTTV
SEITNNECKELLDKPADVVLMNGFEDDFVPKGSTFTGKRKRARSLMLNVANKLLGTNLDDDTLIIGTSGRYEFKNKGIDV
FLESLNRLNRDKKLHKNVLAFINVPGWVGDPREDLQERLKSKEKFDTPLEVPFITHWLHNMTHDQVLDMLKYLGMGNRPD
DKVKVIFVPCYLDGRDGILNKEYYDILLGQDLSVYASYYEPWGYTPLESVAFRVPTITTDLAGFGLWVNSLKNQHGINDG
VEVLHRSDYNDSEVADGIKDTITLFADKSEKEVKEIRKHAADVAEQALWKHFIQYYYEAYDIALRNAMKRQLG
>Mature_553_residues
MVKDLLTPDYIFESSWEVCNKVGGIYTVLSTRANTLQEKFRDRIFFIGPDVWQGKENPLFIESDNLCADWKKHAFKNDHL
SVRVGRWNIPGEPIVILVDFQPFFEQKNEIYTEMWNRFQVDSLHAYGDYDEASMFSYAAGKVVESFYRYNLTETDKVVYQ
AHEWMTGMGALYVQEAVPEVATIFTTHATSIGRSIAGNHKPLYDYLFAYNGDQMAQELNMQSKHSIEKQTAHYVDCFTTV
SEITNNECKELLDKPADVVLMNGFEDDFVPKGSTFTGKRKRARSLMLNVANKLLGTNLDDDTLIIGTSGRYEFKNKGIDV
FLESLNRLNRDKKLHKNVLAFINVPGWVGDPREDLQERLKSKEKFDTPLEVPFITHWLHNMTHDQVLDMLKYLGMGNRPD
DKVKVIFVPCYLDGRDGILNKEYYDILLGQDLSVYASYYEPWGYTPLESVAFRVPTITTDLAGFGLWVNSLKNQHGINDG
VEVLHRSDYNDSEVADGIKDTITLFADKSEKEVKEIRKHAADVAEQALWKHFIQYYYEAYDIALRNAMKRQLG

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI31542868, Length=595, Percent_Identity=28.5714285714286, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI119372286, Length=593, Percent_Identity=28.8364249578415, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI239049591, Length=452, Percent_Identity=28.9823008849558, Blast_Score=179, Evalue=8e-45,
Organism=Caenorhabditis elegans, GI17537175, Length=593, Percent_Identity=27.9932546374368, Blast_Score=229, Evalue=3e-60,
Organism=Saccharomyces cerevisiae, GI6323287, Length=626, Percent_Identity=28.594249201278, Blast_Score=219, Evalue=8e-58,
Organism=Saccharomyces cerevisiae, GI6321127, Length=635, Percent_Identity=27.4015748031496, Blast_Score=208, Evalue=2e-54,
Organism=Drosophila melanogaster, GI45551893, Length=528, Percent_Identity=27.2727272727273, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI21357845, Length=528, Percent_Identity=27.2727272727273, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI24646982, Length=528, Percent_Identity=27.2727272727273, Blast_Score=212, Evalue=5e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63696; Mature: 63696

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKDLLTPDYIFESSWEVCNKVGGIYTVLSTRANTLQEKFRDRIFFIGPDVWQGKENPLF
CCCCCCCCHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEE
IESDNLCADWKKHAFKNDHLSVRVGRWNIPGEPIVILVDFQPFFEQKNEIYTEMWNRFQV
EECCCCHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCC
DSLHAYGDYDEASMFSYAAGKVVESFYRYNLTETDKVVYQAHEWMTGMGALYVQEAVPEV
CCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATIFTTHATSIGRSIAGNHKPLYDYLFAYNGDQMAQELNMQSKHSIEKQTAHYVDCFTTV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SEITNNECKELLDKPADVVLMNGFEDDFVPKGSTFTGKRKRARSLMLNVANKLLGTNLDD
HHHCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
DTLIIGTSGRYEFKNKGIDVFLESLNRLNRDKKLHKNVLAFINVPGWVGDPREDLQERLK
CEEEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHEEEEECCCCCCCCHHHHHHHHH
SKEKFDTPLEVPFITHWLHNMTHDQVLDMLKYLGMGNRPDDKVKVIFVPCYLDGRDGILN
HHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCC
KEYYDILLGQDLSVYASYYEPWGYTPLESVAFRVPTITTDLAGFGLWVNSLKNQHGINDG
CHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHEECCCHHHHHHHHHHHHHHHHHCCCCCHH
VEVLHRSDYNDSEVADGIKDTITLFADKSEKEVKEIRKHAADVAEQALWKHFIQYYYEAY
HHHHHCCCCCHHHHHCCHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIALRNAMKRQLG
HHHHHHHHHHHCC
>Mature Secondary Structure
MVKDLLTPDYIFESSWEVCNKVGGIYTVLSTRANTLQEKFRDRIFFIGPDVWQGKENPLF
CCCCCCCCHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEE
IESDNLCADWKKHAFKNDHLSVRVGRWNIPGEPIVILVDFQPFFEQKNEIYTEMWNRFQV
EECCCCHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCC
DSLHAYGDYDEASMFSYAAGKVVESFYRYNLTETDKVVYQAHEWMTGMGALYVQEAVPEV
CCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATIFTTHATSIGRSIAGNHKPLYDYLFAYNGDQMAQELNMQSKHSIEKQTAHYVDCFTTV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SEITNNECKELLDKPADVVLMNGFEDDFVPKGSTFTGKRKRARSLMLNVANKLLGTNLDD
HHHCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
DTLIIGTSGRYEFKNKGIDVFLESLNRLNRDKKLHKNVLAFINVPGWVGDPREDLQERLK
CEEEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHEEEEECCCCCCCCHHHHHHHHH
SKEKFDTPLEVPFITHWLHNMTHDQVLDMLKYLGMGNRPDDKVKVIFVPCYLDGRDGILN
HHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCC
KEYYDILLGQDLSVYASYYEPWGYTPLESVAFRVPTITTDLAGFGLWVNSLKNQHGINDG
CHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHEECCCHHHHHHHHHHHHHHHHHCCCCCHH
VEVLHRSDYNDSEVADGIKDTITLFADKSEKEVKEIRKHAADVAEQALWKHFIQYYYEAY
HHHHHCCCCCHHHHHCCHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIALRNAMKRQLG
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA