Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346677

Identifier: 29346677

GI number: 29346677

Start: 1574015

End: 1575319

Strand: Reverse

Name: 29346677

Synonym: BT_1267

Alternate gene names: NA

Gene position: 1575319-1574015 (Counterclockwise)

Preceding gene: 29346678

Following gene: 29346676

Centisome position: 25.16

GC content: 44.67

Gene sequence:

>1305_bases
ATGAAAATAAGGATATATAGCTTGTTGTTATGTGGTTTTGCTTTAGGGTCTTTGTCTGCTTTAGCCCAGCAAAGTCCTCT
TCTTGAAAAGTACCGGACTATGGCATTGGATTACAATCACGACTTGAAAGCGGCTGAGAAGAATATAGCTGCCAGTATGG
AAGTGGAAAAATCGGCACGGGCAGATTTGAAACCGAAACTTTCCGGAACAGCCAACTTTCAGTATACGGAGAATCCGTTG
GAATTGACTCTGGATGTCCCTTCTTTAGGATTATCAAGAACAGTGGAAGGGAAACAACTGAACTATGGTGGTTCTCTTTC
CATTCTGCAACCGGTCTATACAGGCGGACGAGTACTGGAATCCATCCGTATGGCACAACATCAGCAATCATTTGCTGCCA
ATCAGGCAAAGGCATTGAATGATGCTGTTTGCTATCAAACGGATATTCAATACTGGAGTGCCGTAGCCCGGCAGGAGATT
GTGACTGTTGCCGAAGATTTTCGTAACTCAATAGCCGCTTTGGTTAAAACAATTAAAGAAAGGGTAGAGGTGGGGCTGGT
TGATCCGCAGGATTTACTGATGGCGGAAGTAAAACTGAACGAAGCGGAGTACCAGTTGCTCCAGGCACAAAGTAATTTTG
AAACAGGGCGGATGGCATTGAATTCTATGATTGGTGTCCGGCTGGAACATCATACGGAACTGGATTCACAGATACCGGTG
GTGGTTGTCGATGATTCTACATGGTTGTCTACCGGTATGGCACGTCCTGAAATTCAGATGGCTTATGACCGGATTCGTAT
GGCCGAGAGTACGAAAAAGTTGAATGATTCGCAGTTCAAACCTCAGTTTTATGTGGGAATAGACGGGAGTTACTCTTCTC
CCGGATATAATTTCAAGAAAGATCTGGATCCCAATTATGCTGTTTATGCAAAAGTCTCAGTACCTATTTTTGAGTGGGGG
AAGCGTAAAAGTGAGAAGCGTGCTTCCTCCTTTCGGGTAGGTATGGCAGAGGATAATCTGAATAAAGTGATGGATCAGGT
TGAACTGGAAATAGGAGTGGCACGTAAAGCGCTGTCACAAGCAATGGAACGGGTTCGTTTGAGCGAAAATTCACTGGCGA
AGGCAGAAGAGAATGAAGCGAAAGCAATAGAACGTTATAATGAAGGAAAAGTGTCAGTGGTGGAAGTGATTGACGCGCAA
ACCTATCGGCAGACATCGCAGGTGAATTATGTACAAGCCAAAGCTGCGGCACAAGGACACTATTCGGAGTTAATAAAAGC
GCTCCACGGATATGATTGTCGATAA

Upstream 100 bases:

>100_bases
CTGCGACTATTATTTTCGGACTGACGTTTGCCACGGGATTGACCTTGTTTGTCACGCCTGCATTATATTCAATGTTTTAT
AAAGTAAAAGGAAAATAAAG

Downstream 100 bases:

>100_bases
AAAGCACTAACTTTGTATGAAAAGAGCCAACTGTATGAATGTAAAGTTGAACACCTTATTGTATATAGCGCTGTTTTCAG
GATTGGGTATATTCTCTTTC

Product: outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein; Acriflavin Resistance Protein; Type I Secretion Outer Membrane Protein

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MKIRIYSLLLCGFALGSLSALAQQSPLLEKYRTMALDYNHDLKAAEKNIAASMEVEKSARADLKPKLSGTANFQYTENPL
ELTLDVPSLGLSRTVEGKQLNYGGSLSILQPVYTGGRVLESIRMAQHQQSFAANQAKALNDAVCYQTDIQYWSAVARQEI
VTVAEDFRNSIAALVKTIKERVEVGLVDPQDLLMAEVKLNEAEYQLLQAQSNFETGRMALNSMIGVRLEHHTELDSQIPV
VVVDDSTWLSTGMARPEIQMAYDRIRMAESTKKLNDSQFKPQFYVGIDGSYSSPGYNFKKDLDPNYAVYAKVSVPIFEWG
KRKSEKRASSFRVGMAEDNLNKVMDQVELEIGVARKALSQAMERVRLSENSLAKAEENEAKAIERYNEGKVSVVEVIDAQ
TYRQTSQVNYVQAKAAAQGHYSELIKALHGYDCR

Sequences:

>Translated_434_residues
MKIRIYSLLLCGFALGSLSALAQQSPLLEKYRTMALDYNHDLKAAEKNIAASMEVEKSARADLKPKLSGTANFQYTENPL
ELTLDVPSLGLSRTVEGKQLNYGGSLSILQPVYTGGRVLESIRMAQHQQSFAANQAKALNDAVCYQTDIQYWSAVARQEI
VTVAEDFRNSIAALVKTIKERVEVGLVDPQDLLMAEVKLNEAEYQLLQAQSNFETGRMALNSMIGVRLEHHTELDSQIPV
VVVDDSTWLSTGMARPEIQMAYDRIRMAESTKKLNDSQFKPQFYVGIDGSYSSPGYNFKKDLDPNYAVYAKVSVPIFEWG
KRKSEKRASSFRVGMAEDNLNKVMDQVELEIGVARKALSQAMERVRLSENSLAKAEENEAKAIERYNEGKVSVVEVIDAQ
TYRQTSQVNYVQAKAAAQGHYSELIKALHGYDCR
>Mature_434_residues
MKIRIYSLLLCGFALGSLSALAQQSPLLEKYRTMALDYNHDLKAAEKNIAASMEVEKSARADLKPKLSGTANFQYTENPL
ELTLDVPSLGLSRTVEGKQLNYGGSLSILQPVYTGGRVLESIRMAQHQQSFAANQAKALNDAVCYQTDIQYWSAVARQEI
VTVAEDFRNSIAALVKTIKERVEVGLVDPQDLLMAEVKLNEAEYQLLQAQSNFETGRMALNSMIGVRLEHHTELDSQIPV
VVVDDSTWLSTGMARPEIQMAYDRIRMAESTKKLNDSQFKPQFYVGIDGSYSSPGYNFKKDLDPNYAVYAKVSVPIFEWG
KRKSEKRASSFRVGMAEDNLNKVMDQVELEIGVARKALSQAMERVRLSENSLAKAEENEAKAIERYNEGKVSVVEVIDAQ
TYRQTSQVNYVQAKAAAQGHYSELIKALHGYDCR

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48509; Mature: 48509

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRIYSLLLCGFALGSLSALAQQSPLLEKYRTMALDYNHDLKAAEKNIAASMEVEKSAR
CEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
ADLKPKLSGTANFQYTENPLELTLDVPSLGLSRTVEGKQLNYGGSLSILQPVYTGGRVLE
CCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCEECCCCCCHHHHHHHCCHHHHH
SIRMAQHQQSFAANQAKALNDAVCYQTDIQYWSAVARQEIVTVAEDFRNSIAALVKTIKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVEVGLVDPQDLLMAEVKLNEAEYQLLQAQSNFETGRMALNSMIGVRLEHHTELDSQIPV
HHHCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCCCCCCCE
VVVDDSTWLSTGMARPEIQMAYDRIRMAESTKKLNDSQFKPQFYVGIDGSYSSPGYNFKK
EEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCC
DLDPNYAVYAKVSVPIFEWGKRKSEKRASSFRVGMAEDNLNKVMDQVELEIGVARKALSQ
CCCCCEEEEEEEECCHHHHCCCHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
AMERVRLSENSLAKAEENEAKAIERYNEGKVSVVEVIDAQTYRQTSQVNYVQAKAAAQGH
HHHHHHCCCCHHHHCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCH
YSELIKALHGYDCR
HHHHHHHHCCCCCC
>Mature Secondary Structure
MKIRIYSLLLCGFALGSLSALAQQSPLLEKYRTMALDYNHDLKAAEKNIAASMEVEKSAR
CEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
ADLKPKLSGTANFQYTENPLELTLDVPSLGLSRTVEGKQLNYGGSLSILQPVYTGGRVLE
CCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCEECCCCCCHHHHHHHCCHHHHH
SIRMAQHQQSFAANQAKALNDAVCYQTDIQYWSAVARQEIVTVAEDFRNSIAALVKTIKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVEVGLVDPQDLLMAEVKLNEAEYQLLQAQSNFETGRMALNSMIGVRLEHHTELDSQIPV
HHHCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCCCCCCCE
VVVDDSTWLSTGMARPEIQMAYDRIRMAESTKKLNDSQFKPQFYVGIDGSYSSPGYNFKK
EEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCC
DLDPNYAVYAKVSVPIFEWGKRKSEKRASSFRVGMAEDNLNKVMDQVELEIGVARKALSQ
CCCCCEEEEEEEECCHHHHCCCHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
AMERVRLSENSLAKAEENEAKAIERYNEGKVSVVEVIDAQTYRQTSQVNYVQAKAAAQGH
HHHHHHCCCCHHHHCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCH
YSELIKALHGYDCR
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA