Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
---|---|
Accession | NC_004663 |
Length | 6,260,361 |
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The map label for this gene is pgl [H]
Identifier: 29346630
GI number: 29346630
Start: 1517499
End: 1518188
Strand: Reverse
Name: pgl [H]
Synonym: BT_1220
Alternate gene names: 29346630
Gene position: 1518188-1517499 (Counterclockwise)
Preceding gene: 29346631
Following gene: 29346629
Centisome position: 24.25
GC content: 49.71
Gene sequence:
>690_bases ATGGAGACAGCCCGTTCGTTGATATTCCACCTGGTGGATATCATGAATGCTGAACCGGACAAAACGTTCAACATAGCAGT GAGTGGTGGCAGCACTCCCGCCTTGATGTTTGATTTATGGGCAAATGAATACGCTGATATTACTCCTTGGAAGCGTATGA AACTTTATTGGGTAGACGAACGTTGCGTTCCTCCCGAAGATTCTGATAGTAATTATGGAATGATGCGTTCCCTGCTTTTG GGGATAGTGCCCATTCCTTACGAAAATGTATTCCGCATCCGCGGAGAAGTGAAACCGGCAAAAGAAGCGGTCCGCTATTC CGAACTTGTCAGCCAGCAGGTACCCAAGAAAAATGGCTGGCCCGAATTTGACATTGTGCTGTTGGGAGCGGGAGATGACG GACATACTTCCTCTATCTTCCCCGGACAGGAGGCTTTGCTCTCTTCCGACCAGATTTATGTGACCAGCACTCATCCCCGC AACGGACAGAAACGTATTGCAATGACCGGATTTCCGATCTTGACCGCTCGCCTTGTTATTTTTCTGATTACCGGAAAGGC GAAGGCGGAAGTGGTGGAAGAAATTTGCCACTCGGGAGATACGGGGCCGGCGGCTTATATAGCGCATCATGCGGAGAATG TCGAACTCTTTATGGATGCCGGAGCCGCGATGTATGTGCGGAATGACTGA
Upstream 100 bases:
>100_bases TGATGCACGAGCATGGGGCAGACTGGACCAATCCGTGTAAGAATTTAACAAATACAGACCAATATTGCGAACTATGAAAC TATCTGTTTTCCCGTCGTCT
Downstream 100 bases:
>100_bases AAAGAGAGAGACAATATAAAGACAAAGTATATTATATATAAGAAGAGAGAGTAACATTGGAGAAGAGAGAAGCTCACGGG GTCGAAGCCGGGAGCTTCTT
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues METARSLIFHLVDIMNAEPDKTFNIAVSGGSTPALMFDLWANEYADITPWKRMKLYWVDERCVPPEDSDSNYGMMRSLLL GIVPIPYENVFRIRGEVKPAKEAVRYSELVSQQVPKKNGWPEFDIVLLGAGDDGHTSSIFPGQEALLSSDQIYVTSTHPR NGQKRIAMTGFPILTARLVIFLITGKAKAEVVEEICHSGDTGPAAYIAHHAENVELFMDAGAAMYVRND
Sequences:
>Translated_229_residues METARSLIFHLVDIMNAEPDKTFNIAVSGGSTPALMFDLWANEYADITPWKRMKLYWVDERCVPPEDSDSNYGMMRSLLL GIVPIPYENVFRIRGEVKPAKEAVRYSELVSQQVPKKNGWPEFDIVLLGAGDDGHTSSIFPGQEALLSSDQIYVTSTHPR NGQKRIAMTGFPILTARLVIFLITGKAKAEVVEEICHSGDTGPAAYIAHHAENVELFMDAGAAMYVRND >Mature_229_residues METARSLIFHLVDIMNAEPDKTFNIAVSGGSTPALMFDLWANEYADITPWKRMKLYWVDERCVPPEDSDSNYGMMRSLLL GIVPIPYENVFRIRGEVKPAKEAVRYSELVSQQVPKKNGWPEFDIVLLGAGDDGHTSSIFPGQEALLSSDQIYVTSTHPR NGQKRIAMTGFPILTARLVIFLITGKAKAEVVEEICHSGDTGPAAYIAHHAENVELFMDAGAAMYVRND
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI52145310, Length=207, Percent_Identity=30.9178743961353, Blast_Score=107, Evalue=6e-24, Organism=Homo sapiens, GI6912586, Length=211, Percent_Identity=32.7014218009479, Blast_Score=98, Evalue=8e-21, Organism=Caenorhabditis elegans, GI115533058, Length=211, Percent_Identity=34.5971563981043, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI115533060, Length=211, Percent_Identity=34.5971563981043, Blast_Score=99, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6321687, Length=202, Percent_Identity=29.2079207920792, Blast_Score=86, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6321957, Length=187, Percent_Identity=33.6898395721925, Blast_Score=78, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6324362, Length=211, Percent_Identity=27.0142180094787, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6319918, Length=214, Percent_Identity=26.6355140186916, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI24641119, Length=217, Percent_Identity=33.6405529953917, Blast_Score=89, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 [H]
Pfam domain/function: NA
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 25463; Mature: 25463
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METARSLIFHLVDIMNAEPDKTFNIAVSGGSTPALMFDLWANEYADITPWKRMKLYWVDE CCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEECC RCVPPEDSDSNYGMMRSLLLGIVPIPYENVFRIRGEVKPAKEAVRYSELVSQQVPKKNGW CCCCCCCCCCCHHHHHHHHHHCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC PEFDIVLLGAGDDGHTSSIFPGQEALLSSDQIYVTSTHPRNGQKRIAMTGFPILTARLVI CCEEEEEEECCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCEEEEEECCHHHHHHHHH FLITGKAKAEVVEEICHSGDTGPAAYIAHHAENVELFMDAGAAMYVRND HEECCCHHHHHHHHHHHCCCCCCHHHEECCCCCEEEEEECCEEEEEECC >Mature Secondary Structure METARSLIFHLVDIMNAEPDKTFNIAVSGGSTPALMFDLWANEYADITPWKRMKLYWVDE CCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEECC RCVPPEDSDSNYGMMRSLLLGIVPIPYENVFRIRGEVKPAKEAVRYSELVSQQVPKKNGW CCCCCCCCCCCHHHHHHHHHHCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC PEFDIVLLGAGDDGHTSSIFPGQEALLSSDQIYVTSTHPRNGQKRIAMTGFPILTARLVI CCEEEEEEECCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCEEEEEECCHHHHHHHHH FLITGKAKAEVVEEICHSGDTGPAAYIAHHAENVELFMDAGAAMYVRND HEECCCHHHHHHHHHHHCCCCCCHHHEECCCCCEEEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]