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The map label for this gene is yadS [H]

Identifier: 29346611

GI number: 29346611

Start: 1496933

End: 1497562

Strand: Reverse

Name: yadS [H]

Synonym: BT_1201

Alternate gene names: 29346611

Gene position: 1497562-1496933 (Counterclockwise)

Preceding gene: 29346619

Following gene: 29346607

Centisome position: 23.92

GC content: 48.57

Gene sequence:

>630_bases
ATGCCGACATTCGTTCAAATTCTTGATTTTATAGGCACATTTGCCTTTGCTATTAGTGGTATCCGGCTGGCTTCGGCAAA
GCGTTTCGACTGGTTCGGAGCCTATGTCGTAGGTCTTGCTACCGCTATCGGTGGCGGTACCATCCGTGATGTACTGCTGG
ATGTGACGCCCGGATGGATGACGAACCCTATCTATTTGATCTGTACGGGACTTGCCTTGATCTGGGTGATCTGTTTCGGT
CGCTGGCTGATCCGTCTGAATAATACCTTTTTTATATTCGATACCATCGGACTGGCTTTGTTTACGGTGGTCGGTGTGGG
GAAAAGTATCGCTTTGGGCTATCCTTTTTGGGTAGCCATCATCATGGGTAGTATCACAGGTGCCGCAGGAGGTGTGATTC
GTGATGTCTTTATCAATGAGATCCCCTTGATTTTCCGAAAAGAAATCTATGCGATGGCGTGTGTAGTAGGCGGCATCGCT
TACTGGCTGTGCGATGCCGCAGGGATGGAATCTTATGTCTGTCAGCTCGTTGGCGGATCGGCGGTATTTGTTACACGCAT
CCTTGCCGTGAAATACCACATTTGCCTTCCTATATTAAAAGGTAGTGAAGAGACTGACGGCGATTCTTGA

Upstream 100 bases:

>100_bases
AACAATTGTTATTTTCATATTGTTTCTATCTAATTCGTGTAGCAAAAGTACATTTTCTTACGGAATTTATTCGTTACTTT
GCATACAAAATAACAAATAT

Downstream 100 bases:

>100_bases
AGATTTTATTTCTTGTCCAGATCCACTTCTCCCCGGTAGCTGATTGCCTGACGGTTCTGCATCGTGACGTCAATGCTGGT
GGTGCCGTCGGGGAACACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MPTFVQILDFIGTFAFAISGIRLASAKRFDWFGAYVVGLATAIGGGTIRDVLLDVTPGWMTNPIYLICTGLALIWVICFG
RWLIRLNNTFFIFDTIGLALFTVVGVGKSIALGYPFWVAIIMGSITGAAGGVIRDVFINEIPLIFRKEIYAMACVVGGIA
YWLCDAAGMESYVCQLVGGSAVFVTRILAVKYHICLPILKGSEETDGDS

Sequences:

>Translated_209_residues
MPTFVQILDFIGTFAFAISGIRLASAKRFDWFGAYVVGLATAIGGGTIRDVLLDVTPGWMTNPIYLICTGLALIWVICFG
RWLIRLNNTFFIFDTIGLALFTVVGVGKSIALGYPFWVAIIMGSITGAAGGVIRDVFINEIPLIFRKEIYAMACVVGGIA
YWLCDAAGMESYVCQLVGGSAVFVTRILAVKYHICLPILKGSEETDGDS
>Mature_208_residues
PTFVQILDFIGTFAFAISGIRLASAKRFDWFGAYVVGLATAIGGGTIRDVLLDVTPGWMTNPIYLICTGLALIWVICFGR
WLIRLNNTFFIFDTIGLALFTVVGVGKSIALGYPFWVAIIMGSITGAAGGVIRDVFINEIPLIFRKEIYAMACVVGGIAY
WLCDAAGMESYVCQLVGGSAVFVTRILAVKYHICLPILKGSEETDGDS

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=202, Percent_Identity=38.6138613861386, Blast_Score=112, Evalue=1e-26,
Organism=Escherichia coli, GI87082304, Length=149, Percent_Identity=36.241610738255, Blast_Score=106, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 22599; Mature: 22468

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTFVQILDFIGTFAFAISGIRLASAKRFDWFGAYVVGLATAIGGGTIRDVLLDVTPGWM
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
TNPIYLICTGLALIWVICFGRWLIRLNNTFFIFDTIGLALFTVVGVGKSIALGYPFWVAI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCHHHHCHHHHHHH
IMGSITGAAGGVIRDVFINEIPLIFRKEIYAMACVVGGIAYWLCDAAGMESYVCQLVGGS
HHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
AVFVTRILAVKYHICLPILKGSEETDGDS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PTFVQILDFIGTFAFAISGIRLASAKRFDWFGAYVVGLATAIGGGTIRDVLLDVTPGWM
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
TNPIYLICTGLALIWVICFGRWLIRLNNTFFIFDTIGLALFTVVGVGKSIALGYPFWVAI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCHHHHCHHHHHHH
IMGSITGAAGGVIRDVFINEIPLIFRKEIYAMACVVGGIAYWLCDAAGMESYVCQLVGGS
HHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
AVFVTRILAVKYHICLPILKGSEETDGDS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA