| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is dbpA [H]
Identifier: 29346564
GI number: 29346564
Start: 1439688
End: 1441022
Strand: Reverse
Name: dbpA [H]
Synonym: BT_1154
Alternate gene names: 29346564
Gene position: 1441022-1439688 (Counterclockwise)
Preceding gene: 29346565
Following gene: 29346563
Centisome position: 23.02
GC content: 45.32
Gene sequence:
>1335_bases ATGTTAGAGAAAAATGAAATAATACAGTCCGCTCTTCAGAATTTGAAGATTGAATCTTTGAACTCGATGCAGGAAGCTGC GCTCGAACAGGGCACGGGCAGGAAAGATGTTATCCTGTTGTCACCGACAGGATCGGGCAAGACATTGGCTTATCTTTTGC CTCTGTTGCTTACCCTAAAACCGAATGATGACAGCGTGCAGGTGCTGATTCTGGTGCCTTCCCGTGAGTTGGCTTTACAG ATAGATACCGTGTTCCGGAGCATGGGAACTTCCTGGAAAACGTGTTGCTGCTACGGTGGGCATCCCATTGCCGAAGAAAA GAAAAGCATTGCAGGAAATCATCCTGCCATTATCCTTGGTACTCCGGGACGTATCACCGACCATCTGTCCAAAGGAAACT TTGATCCCGAAACAATCGAGACTTTGATTATCGATGAGTTTGATAAGTCGCTGGAGTTCGGCTTTCATGATGAGATGGCA GAGATCATCACCCAGCTTCCGGGATTAAAGAAACGTATGCTGCTGTCGGCTACTGATGCCGAAGAAATTCCTCAGTTTAC GGGACTGAACCGGACAGTCAAACTGGATTTTCTTCCGGAGGCAACCGAAGAACAGGAAAACCGGTTGAAGCTGATGAAGG TGCTTTCTCCTTCCAAAGATAAGATTGATACGCTTTACAACTTGCTTTGTTCATTGGGAAGCAGCTCCAGCATTGTCTTC TGTAATCATCGGGATGCGGTAGATCGTGTGCACAAGCTACTCGAAGATAAGAAACTATTAGCCGAACGTTTTCATGGCGG TATGGAACAGCCGGATCGGGAACGGGCATTGTATAAGTTCCGTAACGGAAGCTGTCATGTACTGATCTCTACCGACCTCG CTGCCCGTGGACTTGATATTCCAGAGATAGAGCATATCATTCACTATCATCTGCCTGTAAACGAAGAAGCGTTTACACAT CGTAACGGACGTACGGCACGTTGGGATGCAACAGGTACTTCTTATCTGATTCTTCACGCAGAAGAAAAACTACCGGAATA TATTCCCGAAGATATAGAAACGATGGAACTGCTGGAAAATCCTTCACGTCCTCCCAAATCTGTCTGGACTACTATATATA TAGGTAAAGGAAAGAAGGAGAAACTGAGCCGGATGGACATTGCCGGATTCCTTTATAAAAAAGGTAATCTGACCCGTGAA GATGTAGGTGCGATTGATGTGAAAGAACATTATGCTTTTGTTGCCGTTCGTCGGGCAAAAGTGAAGCAACTCCTGAATCT TATTCAAGGGGAAAAAATCAAAGGAATGAAGACTATCATTGAGGAAGCCAAATAA
Upstream 100 bases:
>100_bases GGCGGGAAATCTGTAAAAGACAATGGTGCTTTTCAGATTTCCCGCTTTCTTTATGCACTATCTTACCGAATCTTTTCGTC CTTTTTGTATCTTTGTCCCC
Downstream 100 bases:
>100_bases AGGGAGCCGAAAAACAACAGGTGTTCTCAAAGCTGAAAGGTGAATTTCAAGAACCAAATAGGTGATTGGGATGCTGACAA TGACGAGATGATCGGCTTTG
Product: ATP-independent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MLEKNEIIQSALQNLKIESLNSMQEAALEQGTGRKDVILLSPTGSGKTLAYLLPLLLTLKPNDDSVQVLILVPSRELALQ IDTVFRSMGTSWKTCCCYGGHPIAEEKKSIAGNHPAIILGTPGRITDHLSKGNFDPETIETLIIDEFDKSLEFGFHDEMA EIITQLPGLKKRMLLSATDAEEIPQFTGLNRTVKLDFLPEATEEQENRLKLMKVLSPSKDKIDTLYNLLCSLGSSSSIVF CNHRDAVDRVHKLLEDKKLLAERFHGGMEQPDRERALYKFRNGSCHVLISTDLAARGLDIPEIEHIIHYHLPVNEEAFTH RNGRTARWDATGTSYLILHAEEKLPEYIPEDIETMELLENPSRPPKSVWTTIYIGKGKKEKLSRMDIAGFLYKKGNLTRE DVGAIDVKEHYAFVAVRRAKVKQLLNLIQGEKIKGMKTIIEEAK
Sequences:
>Translated_444_residues MLEKNEIIQSALQNLKIESLNSMQEAALEQGTGRKDVILLSPTGSGKTLAYLLPLLLTLKPNDDSVQVLILVPSRELALQ IDTVFRSMGTSWKTCCCYGGHPIAEEKKSIAGNHPAIILGTPGRITDHLSKGNFDPETIETLIIDEFDKSLEFGFHDEMA EIITQLPGLKKRMLLSATDAEEIPQFTGLNRTVKLDFLPEATEEQENRLKLMKVLSPSKDKIDTLYNLLCSLGSSSSIVF CNHRDAVDRVHKLLEDKKLLAERFHGGMEQPDRERALYKFRNGSCHVLISTDLAARGLDIPEIEHIIHYHLPVNEEAFTH RNGRTARWDATGTSYLILHAEEKLPEYIPEDIETMELLENPSRPPKSVWTTIYIGKGKKEKLSRMDIAGFLYKKGNLTRE DVGAIDVKEHYAFVAVRRAKVKQLLNLIQGEKIKGMKTIIEEAK >Mature_444_residues MLEKNEIIQSALQNLKIESLNSMQEAALEQGTGRKDVILLSPTGSGKTLAYLLPLLLTLKPNDDSVQVLILVPSRELALQ IDTVFRSMGTSWKTCCCYGGHPIAEEKKSIAGNHPAIILGTPGRITDHLSKGNFDPETIETLIIDEFDKSLEFGFHDEMA EIITQLPGLKKRMLLSATDAEEIPQFTGLNRTVKLDFLPEATEEQENRLKLMKVLSPSKDKIDTLYNLLCSLGSSSSIVF CNHRDAVDRVHKLLEDKKLLAERFHGGMEQPDRERALYKFRNGSCHVLISTDLAARGLDIPEIEHIIHYHLPVNEEAFTH RNGRTARWDATGTSYLILHAEEKLPEYIPEDIETMELLENPSRPPKSVWTTIYIGKGKKEKLSRMDIAGFLYKKGNLTRE DVGAIDVKEHYAFVAVRRAKVKQLLNLIQGEKIKGMKTIIEEAK
Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=322, Percent_Identity=33.2298136645963, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI20149629, Length=372, Percent_Identity=32.7956989247312, Blast_Score=165, Evalue=8e-41, Organism=Homo sapiens, GI83700235, Length=307, Percent_Identity=31.2703583061889, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI4503529, Length=307, Percent_Identity=30.6188925081433, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI51094101, Length=316, Percent_Identity=32.2784810126582, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI164419743, Length=316, Percent_Identity=32.2784810126582, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI224593278, Length=343, Percent_Identity=30.9037900874636, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI148613856, Length=322, Percent_Identity=31.3664596273292, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI38201710, Length=322, Percent_Identity=31.3664596273292, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI13129006, Length=325, Percent_Identity=30.1538461538462, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI169881239, Length=364, Percent_Identity=30.7692307692308, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI13514809, Length=364, Percent_Identity=30.7692307692308, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI164664518, Length=362, Percent_Identity=28.1767955801105, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI31542656, Length=347, Percent_Identity=31.4121037463977, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI13514831, Length=376, Percent_Identity=30.3191489361702, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI262118318, Length=333, Percent_Identity=31.2312312312312, Blast_Score=148, Evalue=8e-36, Organism=Homo sapiens, GI38327634, Length=358, Percent_Identity=31.2849162011173, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI50659095, Length=334, Percent_Identity=29.3413173652695, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI262231852, Length=333, Percent_Identity=31.2312312312312, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI87196351, Length=360, Percent_Identity=30, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI216548263, Length=333, Percent_Identity=31.2312312312312, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI301171475, Length=360, Percent_Identity=30, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI13518015, Length=333, Percent_Identity=31.2312312312312, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI301171467, Length=360, Percent_Identity=30, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI222352149, Length=353, Percent_Identity=31.1614730878187, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI4758138, Length=314, Percent_Identity=29.6178343949045, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI45446747, Length=317, Percent_Identity=29.3375394321767, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI45446743, Length=317, Percent_Identity=29.3375394321767, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI21071032, Length=375, Percent_Identity=28, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI41327779, Length=354, Percent_Identity=29.0960451977401, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI55749865, Length=359, Percent_Identity=28.6908077994429, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI256223453, Length=351, Percent_Identity=29.3447293447293, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI17505907, Length=395, Percent_Identity=28.6075949367089, Blast_Score=132, Evalue=8e-31, Organism=Homo sapiens, GI41327776, Length=370, Percent_Identity=28.9189189189189, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI41327773, Length=359, Percent_Identity=27.0194986072423, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI21040371, Length=345, Percent_Identity=26.0869565217391, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI8922886, Length=314, Percent_Identity=29.6178343949045, Blast_Score=125, Evalue=9e-29, Organism=Homo sapiens, GI62241024, Length=335, Percent_Identity=29.2537313432836, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI6005743, Length=314, Percent_Identity=29.2993630573248, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI62241022, Length=314, Percent_Identity=29.2993630573248, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI4758112, Length=343, Percent_Identity=26.8221574344023, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI18375623, Length=343, Percent_Identity=26.8221574344023, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI9966805, Length=309, Percent_Identity=29.126213592233, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI41327771, Length=361, Percent_Identity=27.7008310249307, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI188035877, Length=350, Percent_Identity=25.4285714285714, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI38569503, Length=325, Percent_Identity=28, Blast_Score=113, Evalue=4e-25, Organism=Homo sapiens, GI38569505, Length=325, Percent_Identity=28, Blast_Score=112, Evalue=5e-25, Organism=Homo sapiens, GI164419732, Length=328, Percent_Identity=28.0487804878049, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI9506931, Length=352, Percent_Identity=26.7045454545455, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI256773275, Length=327, Percent_Identity=28.7461773700306, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI20336298, Length=227, Percent_Identity=29.0748898678414, Blast_Score=81, Evalue=2e-15, Organism=Escherichia coli, GI1787605, Length=439, Percent_Identity=34.8519362186788, Blast_Score=214, Evalue=9e-57, Organism=Escherichia coli, GI87082221, Length=349, Percent_Identity=31.5186246418338, Blast_Score=170, Evalue=2e-43, Organism=Escherichia coli, GI1788930, Length=336, Percent_Identity=31.547619047619, Blast_Score=149, Evalue=5e-37, Organism=Escherichia coli, GI1787016, Length=330, Percent_Identity=29.3939393939394, Blast_Score=143, Evalue=3e-35, Organism=Escherichia coli, GI1790214, Length=342, Percent_Identity=28.0701754385965, Blast_Score=125, Evalue=8e-30, Organism=Escherichia coli, GI48994977, Length=397, Percent_Identity=22.1662468513854, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17507121, Length=322, Percent_Identity=34.1614906832298, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI71995724, Length=322, Percent_Identity=34.1614906832298, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI71987143, Length=342, Percent_Identity=30.7017543859649, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17555296, Length=359, Percent_Identity=31.4763231197772, Blast_Score=171, Evalue=1e-42, Organism=Caenorhabditis elegans, GI71999646, Length=316, Percent_Identity=30.379746835443, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI71999644, Length=316, Percent_Identity=30.379746835443, Blast_Score=154, Evalue=6e-38, Organism=Caenorhabditis elegans, GI17510559, Length=355, Percent_Identity=29.8591549295775, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17505370, Length=350, Percent_Identity=31.1428571428571, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI17552114, Length=335, Percent_Identity=28.3582089552239, Blast_Score=149, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17507945, Length=349, Percent_Identity=30.6590257879656, Blast_Score=148, Evalue=6e-36, Organism=Caenorhabditis elegans, GI115533224, Length=324, Percent_Identity=29.0123456790123, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17537549, Length=332, Percent_Identity=30.421686746988, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17509811, Length=325, Percent_Identity=30.1538461538462, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI115532546, Length=343, Percent_Identity=27.6967930029155, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI115532548, Length=343, Percent_Identity=27.6967930029155, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17556951, Length=326, Percent_Identity=30.9815950920245, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI71995718, Length=397, Percent_Identity=28.7153652392947, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI17510309, Length=365, Percent_Identity=29.3150684931507, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17510307, Length=365, Percent_Identity=29.3150684931507, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI71995514, Length=364, Percent_Identity=28.8461538461538, Blast_Score=133, Evalue=1e-31, Organism=Caenorhabditis elegans, GI193206561, Length=336, Percent_Identity=26.7857142857143, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17553716, Length=336, Percent_Identity=29.4642857142857, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI86570094, Length=422, Percent_Identity=27.7251184834123, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI71982858, Length=355, Percent_Identity=25.9154929577465, Blast_Score=128, Evalue=6e-30, Organism=Caenorhabditis elegans, GI17507641, Length=382, Percent_Identity=27.7486910994764, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17507877, Length=366, Percent_Identity=28.9617486338798, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI32564046, Length=352, Percent_Identity=28.4090909090909, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17552642, Length=351, Percent_Identity=28.2051282051282, Blast_Score=124, Evalue=7e-29, Organism=Caenorhabditis elegans, GI17507879, Length=336, Percent_Identity=30.3571428571429, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17507881, Length=388, Percent_Identity=29.3814432989691, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17536099, Length=339, Percent_Identity=26.2536873156342, Blast_Score=115, Evalue=6e-26, Organism=Caenorhabditis elegans, GI17536101, Length=339, Percent_Identity=26.2536873156342, Blast_Score=114, Evalue=8e-26, Organism=Caenorhabditis elegans, GI32565321, Length=356, Percent_Identity=26.4044943820225, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17508543, Length=323, Percent_Identity=28.4829721362229, Blast_Score=111, Evalue=8e-25, Organism=Caenorhabditis elegans, GI17536103, Length=339, Percent_Identity=26.2536873156342, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71990816, Length=369, Percent_Identity=25.7452574525745, Blast_Score=104, Evalue=9e-23, Organism=Caenorhabditis elegans, GI71997889, Length=349, Percent_Identity=28.080229226361, Blast_Score=102, Evalue=4e-22, Organism=Caenorhabditis elegans, GI25148203, Length=416, Percent_Identity=24.7596153846154, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71982862, Length=229, Percent_Identity=27.5109170305677, Blast_Score=82, Evalue=8e-16, Organism=Caenorhabditis elegans, GI71987152, Length=71, Percent_Identity=42.2535211267606, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI25145561, Length=339, Percent_Identity=25.6637168141593, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI25148291, Length=108, Percent_Identity=32.4074074074074, Blast_Score=65, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6324217, Length=321, Percent_Identity=30.5295950155763, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6323021, Length=340, Percent_Identity=31.4705882352941, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6320173, Length=370, Percent_Identity=29.1891891891892, Blast_Score=160, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6321360, Length=323, Percent_Identity=31.5789473684211, Blast_Score=159, Evalue=9e-40, Organism=Saccharomyces cerevisiae, GI6320224, Length=328, Percent_Identity=31.0975609756098, Blast_Score=158, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6321856, Length=360, Percent_Identity=30.8333333333333, Blast_Score=154, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6320041, Length=358, Percent_Identity=27.3743016759777, Blast_Score=149, Evalue=7e-37, Organism=Saccharomyces cerevisiae, GI6322912, Length=307, Percent_Identity=29.6416938110749, Blast_Score=149, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6322323, Length=307, Percent_Identity=29.6416938110749, Blast_Score=149, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6323947, Length=347, Percent_Identity=31.9884726224784, Blast_Score=148, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6321963, Length=338, Percent_Identity=29.585798816568, Blast_Score=148, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6324778, Length=357, Percent_Identity=29.9719887955182, Blast_Score=148, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6325138, Length=358, Percent_Identity=28.4916201117318, Blast_Score=142, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6322427, Length=325, Percent_Identity=29.2307692307692, Blast_Score=139, Evalue=6e-34, Organism=Saccharomyces cerevisiae, GI6319618, Length=411, Percent_Identity=27.7372262773723, Blast_Score=131, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6321111, Length=371, Percent_Identity=27.4932614555256, Blast_Score=130, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6319714, Length=370, Percent_Identity=29.7297297297297, Blast_Score=130, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6324620, Length=320, Percent_Identity=29.375, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6320449, Length=375, Percent_Identity=25.8666666666667, Blast_Score=125, Evalue=9e-30, Organism=Saccharomyces cerevisiae, GI6320119, Length=349, Percent_Identity=27.5071633237822, Blast_Score=118, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6324366, Length=348, Percent_Identity=27.0114942528736, Blast_Score=114, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6322876, Length=429, Percent_Identity=28.4382284382284, Blast_Score=113, Evalue=7e-26, Organism=Saccharomyces cerevisiae, GI6320400, Length=374, Percent_Identity=26.2032085561497, Blast_Score=104, Evalue=3e-23, Organism=Drosophila melanogaster, GI24585582, Length=341, Percent_Identity=34.6041055718475, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI24645031, Length=322, Percent_Identity=31.3664596273292, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI28574962, Length=316, Percent_Identity=31.3291139240506, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI24582080, Length=310, Percent_Identity=31.9354838709677, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI24582078, Length=310, Percent_Identity=31.9354838709677, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI17136248, Length=310, Percent_Identity=31.9354838709677, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI24582075, Length=310, Percent_Identity=31.9354838709677, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI21356161, Length=343, Percent_Identity=32.0699708454811, Blast_Score=155, Evalue=7e-38, Organism=Drosophila melanogaster, GI24644487, Length=316, Percent_Identity=29.1139240506329, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI45551833, Length=316, Percent_Identity=29.1139240506329, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI24644485, Length=316, Percent_Identity=29.1139240506329, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI24644483, Length=316, Percent_Identity=29.1139240506329, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI281361218, Length=316, Percent_Identity=29.1139240506329, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI24644481, Length=316, Percent_Identity=29.1139240506329, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI24644479, Length=317, Percent_Identity=29.3375394321767, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI21355075, Length=321, Percent_Identity=29.9065420560748, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI18857967, Length=353, Percent_Identity=28.328611898017, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI28571808, Length=346, Percent_Identity=29.7687861271676, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI28571809, Length=346, Percent_Identity=29.7687861271676, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24583281, Length=331, Percent_Identity=28.3987915407855, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI24583279, Length=326, Percent_Identity=28.5276073619632, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI17977678, Length=325, Percent_Identity=28.9230769230769, Blast_Score=145, Evalue=4e-35, Organism=Drosophila melanogaster, GI24662330, Length=403, Percent_Identity=28.287841191067, Blast_Score=145, Evalue=6e-35, Organism=Drosophila melanogaster, GI17985987, Length=372, Percent_Identity=28.494623655914, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI28575014, Length=321, Percent_Identity=30.2180685358255, Blast_Score=138, Evalue=6e-33, Organism=Drosophila melanogaster, GI24584399, Length=360, Percent_Identity=28.8888888888889, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI18859659, Length=419, Percent_Identity=28.4009546539379, Blast_Score=135, Evalue=7e-32, Organism=Drosophila melanogaster, GI28571338, Length=419, Percent_Identity=28.4009546539379, Blast_Score=135, Evalue=8e-32, Organism=Drosophila melanogaster, GI21355559, Length=364, Percent_Identity=29.3956043956044, Blast_Score=132, Evalue=5e-31, Organism=Drosophila melanogaster, GI24642151, Length=362, Percent_Identity=27.0718232044199, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI17136814, Length=366, Percent_Identity=27.0491803278689, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI281365720, Length=276, Percent_Identity=29.7101449275362, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI24642822, Length=370, Percent_Identity=29.4594594594595, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI17647335, Length=363, Percent_Identity=24.5179063360882, Blast_Score=124, Evalue=9e-29, Organism=Drosophila melanogaster, GI20130173, Length=312, Percent_Identity=28.525641025641, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI24584994, Length=352, Percent_Identity=27.5568181818182, Blast_Score=119, Evalue=6e-27, Organism=Drosophila melanogaster, GI24581954, Length=354, Percent_Identity=25.4237288135593, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24581952, Length=354, Percent_Identity=25.4237288135593, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24581956, Length=354, Percent_Identity=25.4237288135593, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24643725, Length=370, Percent_Identity=25.4054054054054, Blast_Score=111, Evalue=9e-25, Organism=Drosophila melanogaster, GI19920478, Length=353, Percent_Identity=27.4787535410765, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI17136666, Length=373, Percent_Identity=24.3967828418231, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI24666101, Length=346, Percent_Identity=23.9884393063584, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24640164, Length=321, Percent_Identity=20.8722741433022, Blast_Score=76, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 49977; Mature: 49977
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEKNEIIQSALQNLKIESLNSMQEAALEQGTGRKDVILLSPTGSGKTLAYLLPLLLTLK CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHEEC PNDDSVQVLILVPSRELALQIDTVFRSMGTSWKTCCCYGGHPIAEEKKSIAGNHPAIILG CCCCCEEEEEEECCCHHEEHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCCCEEEEE TPGRITDHLSKGNFDPETIETLIIDEFDKSLEFGFHDEMAEIITQLPGLKKRMLLSATDA CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHEECCCH EEIPQFTGLNRTVKLDFLPEATEEQENRLKLMKVLSPSKDKIDTLYNLLCSLGSSSSIVF HHCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEE CNHRDAVDRVHKLLEDKKLLAERFHGGMEQPDRERALYKFRNGSCHVLISTDLAARGLDI ECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEECCCCEEEEEECCHHHCCCCC PEIEHIIHYHLPVNEEAFTHRNGRTARWDATGTSYLILHAEEKLPEYIPEDIETMELLEN HHHHHHEEEECCCCCCHHHCCCCCEEEEECCCCEEEEEEEHHHHHHHCCCHHHHHHHHHC PSRPPKSVWTTIYIGKGKKEKLSRMDIAGFLYKKGNLTREDVGAIDVKEHYAFVAVRRAK CCCCCCCEEEEEEECCCCHHHHHHHHHHHHEEECCCCCHHHCCCEEHHHHHHHHHHHHHH VKQLLNLIQGEKIKGMKTIIEEAK HHHHHHHHCCCCCCHHHHHHHHCC >Mature Secondary Structure MLEKNEIIQSALQNLKIESLNSMQEAALEQGTGRKDVILLSPTGSGKTLAYLLPLLLTLK CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHEEC PNDDSVQVLILVPSRELALQIDTVFRSMGTSWKTCCCYGGHPIAEEKKSIAGNHPAIILG CCCCCEEEEEEECCCHHEEHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCCCEEEEE TPGRITDHLSKGNFDPETIETLIIDEFDKSLEFGFHDEMAEIITQLPGLKKRMLLSATDA CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHEECCCH EEIPQFTGLNRTVKLDFLPEATEEQENRLKLMKVLSPSKDKIDTLYNLLCSLGSSSSIVF HHCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEE CNHRDAVDRVHKLLEDKKLLAERFHGGMEQPDRERALYKFRNGSCHVLISTDLAARGLDI ECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEECCCCEEEEEECCHHHCCCCC PEIEHIIHYHLPVNEEAFTHRNGRTARWDATGTSYLILHAEEKLPEYIPEDIETMELLEN HHHHHHEEEECCCCCCHHHCCCCCEEEEECCCCEEEEEEEHHHHHHHCCCHHHHHHHHHC PSRPPKSVWTTIYIGKGKKEKLSRMDIAGFLYKKGNLTREDVGAIDVKEHYAFVAVRRAK CCCCCCCEEEEEEECCCCHHHHHHHHHHHHEEECCCCCHHHCCCEEHHHHHHHHHHHHHH VKQLLNLIQGEKIKGMKTIIEEAK HHHHHHHHCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]