Click here to switch to the map view.

The map label for this gene is ycjY [C]

Identifier: 29346531

GI number: 29346531

Start: 1409462

End: 1411069

Strand: Reverse

Name: ycjY [C]

Synonym: BT_1121

Alternate gene names: 29346531

Gene position: 1411069-1409462 (Counterclockwise)

Preceding gene: 29346532

Following gene: 29346529

Centisome position: 22.54

GC content: 50.0

Gene sequence:

>1608_bases
ATGAACAAGTTAATTACAACCATCGCCTGCCTGATATGCTGTATCGTTTATACGCAGGCACAAAACAAGAACAATATGTT
AAGCAAGAAAGAACAAAGTATTGCCGCCATCAGTATGTATGCCGCACGTGGCAATCAGGACAGCCTCAAAGTGATCCTTG
CCAGAGGACTTGACTGTGGGCTGACCGTGAGCGAAGAAAAAGAAGTACTTACCCAGCTCTATGCCTATTGCGGCTTTCCA
CGCAGCATGGGTGCATTGGTTACGCTGATGAATCTCACCAAAGAGCGTGCAGCACAAGGCATAAAGGATGAAGCCGGACG
GGAGCCTTCTCCGGTAAAGAGTTCGGATATGTTTGTTGTCGGTGGACAAAACCAGCTGAAACTGTTCGGTCGTCCGGCAC
TAGGAGAAGTGCTGACATTTGCTCCGGCATTGGACCAATTTCTGAAAGCTCATCTGTTCGGTGACATATTCAGCCGTGAC
AATCTCGACTGGCGTACCCGTGAACTGTCTACTGTGGCTGCCTTGTCGGTGTTGGACGGCGTGAAGAATGAGTTGAATAC
TCACATTGCCCATGCCAAGCACAACGGCGTGACACAGGCTCAGATAGACGAAGTACTTATCATGGCGGCACGCTGTCGGA
ACGGAATGGTGCTTTCTGAATCCGATGAACCGGCAAAGACTTTTCAAACAGATCCGACAATTACTGTCCGTAAGGTCTTT
TATAAAAACAGGTATGATATCATGCTTTGCGCCGAAATGTACCTCCCGAAGGATTTCAATGAAGCGCAACACTATGCAGC
CCTCATCATCGGACACCCGTTCGGGGCTGTGAAAGAACAGTGTAGCGGACTCTATGCACAGGAAATGGCACGGCGAGGCT
ACGTGACTCTGGCTTTTGATGCTTCCTATCAAGGCGAAAGTGGAGGAGAACCGCGTCACACGGTATCGCCCGACGCATTG
GTGGAAGACTTCAGTGCTTCTGTAGACTGGCTCGGACTACAACCGTTTATTGACCGCAACCGTATCGGTGTGATTGGCAT
CTGCGGAAGCGGCGGGTTCTCTGTCTGTGCGGCTTCTCTCGACCCCCGCATCAAGGCATTGGCAACCGTGAGCATGTATG
ATATGGGGCGTGCCACCCGTAACGGTTTGGGGGATTCGATGACGGATGAACAAAGACGCAAACTGTTGGATGAAGTTGCC
GAACAACGTTGGAAGGAAGCAGAAACGGGAGAAGCACGTATCCGCTTTGGCACACCGGAGAAACTGCTGGGAAATGCCAA
TGCCGTGCAGAAGGAGTTTTTCGATTACTATCGCAACCCCTTGCGTGGCTATCATCCGCGCTATCAAGGTATACGCTTTA
CCAGTCAGGCGGCATTGATGAACTTCTATCCGTTTGCCATGATTAAAGAGATTTCACCACGCCCCGTGCTATTCATTGCA
GGCGAGCATGCACATTCGCGCTATTTCAGTGAGGATGCCTATCAAGAAGCCAGCGAACCGAAAGAACTGTATATCGTTCC
CGGAGCCAATCATGTAGACTTGTATGACCGGATGGATAAGATACCGTTCGAAAAAATTTCGGAATTCTTCTGGTATGCTT
TGCGGTAA

Upstream 100 bases:

>100_bases
CCGAAATACGGGGTTACTGAAGAATACGGGAAAAAATATCCGACTGGAAAGACCGGCGTTTGTCAAGTTCTTATAAATTC
ATCACTAAACAGAAAGCAAT

Downstream 100 bases:

>100_bases
TTCAGATGAAAATGGTAATGCTATCCGTGATTATGATACAGCAAAGCGAATACGCAGGAGGGTAACTTTGCAACAGAAAC
AATTTAAAGATTATAGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MNKLITTIACLICCIVYTQAQNKNNMLSKKEQSIAAISMYAARGNQDSLKVILARGLDCGLTVSEEKEVLTQLYAYCGFP
RSMGALVTLMNLTKERAAQGIKDEAGREPSPVKSSDMFVVGGQNQLKLFGRPALGEVLTFAPALDQFLKAHLFGDIFSRD
NLDWRTRELSTVAALSVLDGVKNELNTHIAHAKHNGVTQAQIDEVLIMAARCRNGMVLSESDEPAKTFQTDPTITVRKVF
YKNRYDIMLCAEMYLPKDFNEAQHYAALIIGHPFGAVKEQCSGLYAQEMARRGYVTLAFDASYQGESGGEPRHTVSPDAL
VEDFSASVDWLGLQPFIDRNRIGVIGICGSGGFSVCAASLDPRIKALATVSMYDMGRATRNGLGDSMTDEQRRKLLDEVA
EQRWKEAETGEARIRFGTPEKLLGNANAVQKEFFDYYRNPLRGYHPRYQGIRFTSQAALMNFYPFAMIKEISPRPVLFIA
GEHAHSRYFSEDAYQEASEPKELYIVPGANHVDLYDRMDKIPFEKISEFFWYALR

Sequences:

>Translated_535_residues
MNKLITTIACLICCIVYTQAQNKNNMLSKKEQSIAAISMYAARGNQDSLKVILARGLDCGLTVSEEKEVLTQLYAYCGFP
RSMGALVTLMNLTKERAAQGIKDEAGREPSPVKSSDMFVVGGQNQLKLFGRPALGEVLTFAPALDQFLKAHLFGDIFSRD
NLDWRTRELSTVAALSVLDGVKNELNTHIAHAKHNGVTQAQIDEVLIMAARCRNGMVLSESDEPAKTFQTDPTITVRKVF
YKNRYDIMLCAEMYLPKDFNEAQHYAALIIGHPFGAVKEQCSGLYAQEMARRGYVTLAFDASYQGESGGEPRHTVSPDAL
VEDFSASVDWLGLQPFIDRNRIGVIGICGSGGFSVCAASLDPRIKALATVSMYDMGRATRNGLGDSMTDEQRRKLLDEVA
EQRWKEAETGEARIRFGTPEKLLGNANAVQKEFFDYYRNPLRGYHPRYQGIRFTSQAALMNFYPFAMIKEISPRPVLFIA
GEHAHSRYFSEDAYQEASEPKELYIVPGANHVDLYDRMDKIPFEKISEFFWYALR
>Mature_535_residues
MNKLITTIACLICCIVYTQAQNKNNMLSKKEQSIAAISMYAARGNQDSLKVILARGLDCGLTVSEEKEVLTQLYAYCGFP
RSMGALVTLMNLTKERAAQGIKDEAGREPSPVKSSDMFVVGGQNQLKLFGRPALGEVLTFAPALDQFLKAHLFGDIFSRD
NLDWRTRELSTVAALSVLDGVKNELNTHIAHAKHNGVTQAQIDEVLIMAARCRNGMVLSESDEPAKTFQTDPTITVRKVF
YKNRYDIMLCAEMYLPKDFNEAQHYAALIIGHPFGAVKEQCSGLYAQEMARRGYVTLAFDASYQGESGGEPRHTVSPDAL
VEDFSASVDWLGLQPFIDRNRIGVIGICGSGGFSVCAASLDPRIKALATVSMYDMGRATRNGLGDSMTDEQRRKLLDEVA
EQRWKEAETGEARIRFGTPEKLLGNANAVQKEFFDYYRNPLRGYHPRYQGIRFTSQAALMNFYPFAMIKEISPRPVLFIA
GEHAHSRYFSEDAYQEASEPKELYIVPGANHVDLYDRMDKIPFEKISEFFWYALR

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycjY [H]

Homologues:

Organism=Escherichia coli, GI221142683, Length=277, Percent_Identity=37.5451263537906, Blast_Score=189, Evalue=4e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000383 [H]

Pfam domain/function: PF02129 Peptidase_S15 [H]

EC number: NA

Molecular weight: Translated: 59893; Mature: 59893

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLITTIACLICCIVYTQAQNKNNMLSKKEQSIAAISMYAARGNQDSLKVILARGLDCG
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
LTVSEEKEVLTQLYAYCGFPRSMGALVTLMNLTKERAAQGIKDEAGREPSPVKSSDMFVV
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCEEEE
GGQNQLKLFGRPALGEVLTFAPALDQFLKAHLFGDIFSRDNLDWRTRELSTVAALSVLDG
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
VKNELNTHIAHAKHNGVTQAQIDEVLIMAARCRNGMVLSESDEPAKTFQTDPTITVRKVF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHCCCCCCEEEHHHH
YKNRYDIMLCAEMYLPKDFNEAQHYAALIIGHPFGAVKEQCSGLYAQEMARRGYVTLAFD
HCCCCCEEEEEHHHCCCCCCHHHHEEEEEEECCCHHHHHHHCCHHHHHHHHCCCEEEEEE
ASYQGESGGEPRHTVSPDALVEDFSASVDWLGLQPFIDRNRIGVIGICGSGGFSVCAASL
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCEEEEEEECCCCHHHEECCC
DPRIKALATVSMYDMGRATRNGLGDSMTDEQRRKLLDEVAEQRWKEAETGEARIRFGTPE
CCHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHH
KLLGNANAVQKEFFDYYRNPLRGYHPRYQGIRFTSQAALMNFYPFAMIKEISPRPVLFIA
HHHCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEE
GEHAHSRYFSEDAYQEASEPKELYIVPGANHVDLYDRMDKIPFEKISEFFWYALR
CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNKLITTIACLICCIVYTQAQNKNNMLSKKEQSIAAISMYAARGNQDSLKVILARGLDCG
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
LTVSEEKEVLTQLYAYCGFPRSMGALVTLMNLTKERAAQGIKDEAGREPSPVKSSDMFVV
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCEEEE
GGQNQLKLFGRPALGEVLTFAPALDQFLKAHLFGDIFSRDNLDWRTRELSTVAALSVLDG
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
VKNELNTHIAHAKHNGVTQAQIDEVLIMAARCRNGMVLSESDEPAKTFQTDPTITVRKVF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHCCCCCCEEEHHHH
YKNRYDIMLCAEMYLPKDFNEAQHYAALIIGHPFGAVKEQCSGLYAQEMARRGYVTLAFD
HCCCCCEEEEEHHHCCCCCCHHHHEEEEEEECCCHHHHHHHCCHHHHHHHHCCCEEEEEE
ASYQGESGGEPRHTVSPDALVEDFSASVDWLGLQPFIDRNRIGVIGICGSGGFSVCAASL
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCEEEEEEECCCCHHHEECCC
DPRIKALATVSMYDMGRATRNGLGDSMTDEQRRKLLDEVAEQRWKEAETGEARIRFGTPE
CCHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHH
KLLGNANAVQKEFFDYYRNPLRGYHPRYQGIRFTSQAALMNFYPFAMIKEISPRPVLFIA
HHHCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEE
GEHAHSRYFSEDAYQEASEPKELYIVPGANHVDLYDRMDKIPFEKISEFFWYALR
CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1427017; 10984043 [H]