Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
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Accession | NC_004663 |
Length | 6,260,361 |
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The map label for this gene is 29346527
Identifier: 29346527
GI number: 29346527
Start: 1403593
End: 1403958
Strand: Reverse
Name: 29346527
Synonym: BT_1117
Alternate gene names: NA
Gene position: 1403958-1403593 (Counterclockwise)
Preceding gene: 29346528
Following gene: 29346526
Centisome position: 22.43
GC content: 32.51
Gene sequence:
>366_bases ATGAGTATTCAATTTGACATTGCAAAACAGATTATAGCTGAAACATGCCCTAATCGCAAACTTAAGTTGGAGAATATTCG CCTTTTTGCAGATATTATTCAGCCTAAGAAATATCAAAAAGGTGATATAATTCTAAATGAAGGTGATATCTGTAATTGCC TATTTTATATAGAAAAGGGATTTATTAGACAGCACTACCTAAAGCATGATAAGGATGTGATAGAACATTTAGCATGTGAA AAAAATGTTGTCTGGTGTATTGACAGCTATTTTAACCGAGAGCCAACACATCTTATGATGGATGCTGTAGAAAACAGTGT TTTATGGGAAATTCCGCGTGATATAATGGAAGAATATGGAAAATAA
Upstream 100 bases:
>100_bases TGAGAAAAATGGGTATACCACAGTTTTTCCTATTCCACAAAAAAGTATAGACTTGAACCCAAAATTGAAACAAAATGTTG GATATAAATAACTTTAGCCT
Downstream 100 bases:
>100_bases GAAGGAAGAGCCAACTTTGAACAAGGTAACGTTCGTAAACGGTGTGCAGATTAAAAACAAAAGTGGAAAGCACTGATGTG GGATAATTTTATCTATTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSIQFDIAKQIIAETCPNRKLKLENIRLFADIIQPKKYQKGDIILNEGDICNCLFYIEKGFIRQHYLKHDKDVIEHLACE KNVVWCIDSYFNREPTHLMMDAVENSVLWEIPRDIMEEYGK
Sequences:
>Translated_121_residues MSIQFDIAKQIIAETCPNRKLKLENIRLFADIIQPKKYQKGDIILNEGDICNCLFYIEKGFIRQHYLKHDKDVIEHLACE KNVVWCIDSYFNREPTHLMMDAVENSVLWEIPRDIMEEYGK >Mature_120_residues SIQFDIAKQIIAETCPNRKLKLENIRLFADIIQPKKYQKGDIILNEGDICNCLFYIEKGFIRQHYLKHDKDVIEHLACEK NVVWCIDSYFNREPTHLMMDAVENSVLWEIPRDIMEEYGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14378; Mature: 14247
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIQFDIAKQIIAETCPNRKLKLENIRLFADIIQPKKYQKGDIILNEGDICNCLFYIEKG CCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHH FIRQHYLKHDKDVIEHLACEKNVVWCIDSYFNREPTHLMMDAVENSVLWEIPRDIMEEYG HHHHHHHHCHHHHHHHHHHCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHC K C >Mature Secondary Structure SIQFDIAKQIIAETCPNRKLKLENIRLFADIIQPKKYQKGDIILNEGDICNCLFYIEKG CCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHH FIRQHYLKHDKDVIEHLACEKNVVWCIDSYFNREPTHLMMDAVENSVLWEIPRDIMEEYG HHHHHHHHCHHHHHHHHHHCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA