| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29346523
Identifier: 29346523
GI number: 29346523
Start: 1400017
End: 1400367
Strand: Reverse
Name: 29346523
Synonym: BT_1113
Alternate gene names: NA
Gene position: 1400367-1400017 (Counterclockwise)
Preceding gene: 29346524
Following gene: 29346520
Centisome position: 22.37
GC content: 40.46
Gene sequence:
>351_bases ATGGTGGAGATTGAACCGGAAGAACCCTATTCTGATGAATATAATGAAGTGGTTGACCGTTTCAAAAATGAAAGAGACAA TCATATTCTTCCAGCTCTGCGTACAAAAGTAGAGAATATGGATGATTATGATACATTGATTATCGGTAGTCCTATTTGGG GTGGTCTTCTGTCTTCTCCTGTAAAAAGTTTCCTGTCCGGTTATGATTTGTCCGGGAAAAAGATACTCCCATTCTGTACA CATGGAGGAAGCGGAACAGCACAAAGTGTGGATAATATCCGCAAACTATGTCCCCATGCTGAAATATTGCTGTTTATGGC AGTCAAACTGCAAACTCTCGGAATGAAGTGA
Upstream 100 bases:
>100_bases GCCTCACTCAGAGCCGGGGAAAACATTGATAGTCTATTTCTCATGGAGCGGACATACGCAAACTGTAGCCAACATTATCC ATGAACTTATTGGATGCGAC
Downstream 100 bases:
>100_bases AAAAATGGCTGTCAGAAGCCGGATTTTCTGTCGAATTAAATTACGCCCGTTTAATAGTTTTAATACTGAAATGAAATATC CTTTGTTATCCGCACTCTTT
Product: flavodoxin
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; Flavodoxin Protein; Flavodoxin Family Protein; Aldo/Keto Reductase; Lipoprotein
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MVEIEPEEPYSDEYNEVVDRFKNERDNHILPALRTKVENMDDYDTLIIGSPIWGGLLSSPVKSFLSGYDLSGKKILPFCT HGGSGTAQSVDNIRKLCPHAEILLFMAVKLQTLGMK
Sequences:
>Translated_116_residues MVEIEPEEPYSDEYNEVVDRFKNERDNHILPALRTKVENMDDYDTLIIGSPIWGGLLSSPVKSFLSGYDLSGKKILPFCT HGGSGTAQSVDNIRKLCPHAEILLFMAVKLQTLGMK >Mature_116_residues MVEIEPEEPYSDEYNEVVDRFKNERDNHILPALRTKVENMDDYDTLIIGSPIWGGLLSSPVKSFLSGYDLSGKKILPFCT HGGSGTAQSVDNIRKLCPHAEILLFMAVKLQTLGMK
Specific function: Unknown
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12985; Mature: 12985
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEIEPEEPYSDEYNEVVDRFKNERDNHILPALRTKVENMDDYDTLIIGSPIWGGLLSSP CCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEECCCHHHHHHHHH VKSFLSGYDLSGKKILPFCTHGGSGTAQSVDNIRKLCPHAEILLFMAVKLQTLGMK HHHHHCCCCCCCCEECEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVEIEPEEPYSDEYNEVVDRFKNERDNHILPALRTKVENMDDYDTLIIGSPIWGGLLSSP CCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEECCCHHHHHHHHH VKSFLSGYDLSGKKILPFCTHGGSGTAQSVDNIRKLCPHAEILLFMAVKLQTLGMK HHHHHCCCCCCCCEECEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA