| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29346520
Identifier: 29346520
GI number: 29346520
Start: 1397337
End: 1397546
Strand: Reverse
Name: 29346520
Synonym: BT_1110
Alternate gene names: NA
Gene position: 1397546-1397337 (Counterclockwise)
Preceding gene: 29346523
Following gene: 29346519
Centisome position: 22.32
GC content: 38.57
Gene sequence:
>210_bases ATGGTACTAGATAATAGTAACTCCCCCTATCACATAGAGGAAGAACTTTGGTTACAGATACTTTCTCTGTCAAGAGAGTT GCAGGAGTGTAAAGCTAGTCTGCACCATAATACTTTGGACTGTATTTCCGATAAGATTGAAGGAATAGAAAGAGAACTGG ATGTCTTATTGGATATTCTGCAAGGGAGGCAAGACAAAAAGACATCATAG
Upstream 100 bases:
>100_bases GAATATTCTATCCTTTCATTTCCATTCCTGTCTCTTTCGGAACATACCGTTCATTATCATACAAATTACATGCCAAAGCA CTTTTCTGCCTTCTCCTGCT
Downstream 100 bases:
>100_bases TGCTATTTTTTATGACAATTTGTCTACACCGATAAGTTATCCTATTATTTAAGCCTCGTTTAAGAATTCCGTTTTATGGG TTACCCACAATCGAATGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MVLDNSNSPYHIEEELWLQILSLSRELQECKASLHHNTLDCISDKIEGIERELDVLLDILQGRQDKKTS
Sequences:
>Translated_69_residues MVLDNSNSPYHIEEELWLQILSLSRELQECKASLHHNTLDCISDKIEGIERELDVLLDILQGRQDKKTS >Mature_69_residues MVLDNSNSPYHIEEELWLQILSLSRELQECKASLHHNTLDCISDKIEGIERELDVLLDILQGRQDKKTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8005; Mature: 8005
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLDNSNSPYHIEEELWLQILSLSRELQECKASLHHNTLDCISDKIEGIERELDVLLDIL CCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QGRQDKKTS CCCCCCCCC >Mature Secondary Structure MVLDNSNSPYHIEEELWLQILSLSRELQECKASLHHNTLDCISDKIEGIERELDVLLDIL CCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QGRQDKKTS CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA