Click here to switch to the map view.

The map label for this gene is 29346429

Identifier: 29346429

GI number: 29346429

Start: 1273457

End: 1276228

Strand: Reverse

Name: 29346429

Synonym: BT_1019

Alternate gene names: NA

Gene position: 1276228-1273457 (Counterclockwise)

Preceding gene: 29346430

Following gene: 29346428

Centisome position: 20.39

GC content: 44.37

Gene sequence:

>2772_bases
ATGCAGGAAGGGCTGGTGGTCGTTGAAAGCTGTCCCCGTTTGGGATGGGCAATGGAATCACCGGAGAATGGCACGAGACA
GACTGCTTATGAAATAGAGATTAGGGAGGCTTTTACCGGACGTTCCGTCTGGAATAGTGGAAAGGTTACTTCTTCACAGA
GTCAGCTGGTTCCGACTGAAGGAGCGGATATATGTCTGAATAATCCATTTAATTATAGTTGGCGTGTGCGTGTCTGGGAT
GAGACGGATACTCCTTCCGAATGGAGTCAGGAAGCAAAATTCCGTTTGGCATCCGATGACCTTTCTTCAGGGAAATGGAT
CGGCGCCATCACTCGTAAGGATTCTCACCTTCCCGAAGGGCGAAAGTTTCATGGTGGCGAATTGAAGAAACCGGAGGTGA
AAGCTGCTTGGGAAGCGGTAGATACTTTGGCAAAGAAAAGTATTTGCTTGCGAAGAACGTTTCAGACAGGAGAGGCAAAA
GGGAAGAATGCGAATCGGAAATCCGGAAAGAAAATCGTGGAAGCTACTGCGTATGTTTGTGGCCTGGGATTCTATGAGTT
TTCTCTGAATGGCAAAAAAATAGGAGATAGTGAATTTGCTCCGCTTTGGAGCGATTATGATAAGAGTGTTTATTATAATA
CATACGATGTAACGGAGCAGTTACAGGATGGTGAGAATGTTGTAGGAATCTTATTGGGGAATGGATTCTACAATGTACAG
GGAGGGCGCTATCGCAAATTGCAGATTAGTTTTGGTCCTCCCACACTTTTATTTGAATTAGTAATCAATTATGAGGATGG
AACACGCGAGACGATCCGTTCGGATCATGAGTGGAAATATGATCTGAGTCCGATAACCTTTAATTGTATTTATGGAGGGG
AAGATTATGATGCCCGTCGCGAACAGAAAGGATGGAATCAAGTTGGTTTCAATGATAGTCATTGGCGTCCGGTAGTGGTT
CAGGAAGCGCCGAAAGGAGTGCTCCGTTCGCAGATGGCACCTCCGGTGAAGATTATGGAACGGTATGATATTCAGAAAGT
AACCAAGTTGAATTCAGAACAGGTGATGGCTGCTTCCAAATCTACCAAACGAACAGTAGACCCTTCTGCAGTTGTGTTGG
ATATGGGACAGAATCTGGCCGGTTTTCCGGAGATAACCGTACGTGGTAAACGAGGACAGAAAGTCACCTTGATAGTAGCG
GAAGCATTGATGGATGAAGGAGCTTGTAATCAGCGTCAGACAGGGCGTCAGCATTATTATGAATATACACTGAAAGGTGA
AGGTGACGAAATCTGGCATCCTCGTTTTTCATATTATGGTTTTCGGTACATTCAGGTAGAAGGTGCTGTATTGAAAGGGC
AGAAAAATCCTCAGAAACTGCCTGTCCTTAAAAACATTCAATCCTGTTTTATCTATAATTCGGCAAAGAAAGTCTCTACA
TTCGAATCTTCCAACCGAATATTCAATGCAGCTCATCGATTGATTGAGAAGGCGGTTCGCAGTAATATGCAATCCGTATT
TACTGATTGTCCGCATCGGGAGAAACTCGGATGGCTGGAACAGGTGCACCTTAATGGACCGGGACTGCTCTATAATTATG
ATCTGACAGCCTATGCTCCACAGATTATGCAGAATATGGCAGACGCCCAGCATCCGAATGGGGCAATGCCCACAACGGCT
CCGGAGTATGTAGTCTTTGAAGGTCCCGGAATGGATGCTTTTGCCGAATCCCCGGAGTGGGGAGGTTCACTGGTTATTTT
CCCGTTTATGTACTATGAAACTTACGGGGATGATTCTTTGATTAAGAAGTATTATCAGCATATGCGTCGTTACACTGACT
ATCTTAAGACTCGGGCAGATAACGGTATTCTTTCTTTCGGATTGGGTGACTGGTATGATTATGGAGATTTCCGCGCCGGA
TTCTCCCGTAATACACCTGTTCCGTTGGTGGCTACGGCACATTATTATATGACTGTCATGTATCTGATAAAGGCTGCCCG
AATGGTAGGCAATGAATTTGACGTTCGTTATTACAGTTCATTGGCATACGATATAATGGTAGCGTTTAACAAACGGTTCC
TGGATAGTAATACAGCACAATATGGTACAGGGAGTCAAGCTAGTAATGCACTTCCCATCTTCCTTCAGATGATTCAAAGT
ACAGGAGATAAAGGAGATTACACGCCGGATGCAAGTCTGGCTGCCAAAGTGTTGACGAATCTGATTAAAGATGTGGAATC
GCACGGCAATCGTTTGACCACGGGAGATGTGGGAAACCGCTATCTGATTCAGACATTGGCACGTAATGGACAGCATGAGC
TTATTTATAAGATGTTCAATCATGAAGAAGCTCCCGGATATGGCTTCCAGTTGAAGTTTGGTGCAACTACATTGACGGAG
CAGTGGGACCCGCGTCAGGGTTCTTCATGGAATCATTTCATGATGGGACAGATTGATGAATGGTTCTTTAATTCATTGAT
TGGTATTCGTCCGTCTACAACATTATCAGCTTCTGTAAATGAAAAGGATGAGCCAATGCAAGGTTATCAGAAATTTGTCA
TTGCTCCGAAGCCGGTAGGAGACTTGAAATACGTTAAATCAACTTATGAGACTCTTTACGGTACGATTCTGGTAGACTGG
ACTCGTCAGAGCGGTACTTTTACTCTGAATGTATCTGTACCGGTGAATACCACTGCTATCGTTTATCTTCCGGGTGAAAA
AGAACCGAAAGAAGTACAAAGCGGGACATATAAGTTTGTTGCTGCCGAATAA

Upstream 100 bases:

>100_bases
CAGAGCAATAATGACTTTTAAGAAATATCTTCTTCTTCTACTTTGTCTGCCATGCTTCGTACAGGCAAAGAATATAACGA
TCAGCCGCCTTACCTGCGAA

Downstream 100 bases:

>100_bases
GATATAAAAAAGAAGAACTATTTAATAATATAGAATATGAATTTACGAATCACTCTTTTGGCTTTTCTTTGCCTTTGCGC
AACAGCGATCCTTCGTGCCG

Product: putative secreted hydrolase

Products: NA

Alternate protein names: Alpha-Rhamnosidase; Alfa-L-Rhamnosidase; Rhamnosidase; Glycoside Hydrolase Family; Hydrolase; Rhamnosidase A; Exported Rhamnosidase A; Secreted Hydrolase; Exported Rhamnosidase Protein; Alpha-L-Rhamnosidase Protein; Secreted Protein; Glycolsyl Hydrolase Family; Alpha-L-Rhamnosidase N-Terminal Domain-Containing Protein; Ricin B Lectin; Exported Rhamnosidase; Glycosyl Hydrolase; Alpha-L-Rhamnosidase Family; Bacterial Alpha-L-Rhamnosidase Family; Alpha-L-Rhamnosidase Domain-Containing Protein; Alpha-L-Rhamnosidase Domain Protein

Number of amino acids: Translated: 923; Mature: 923

Protein sequence:

>923_residues
MQEGLVVVESCPRLGWAMESPENGTRQTAYEIEIREAFTGRSVWNSGKVTSSQSQLVPTEGADICLNNPFNYSWRVRVWD
ETDTPSEWSQEAKFRLASDDLSSGKWIGAITRKDSHLPEGRKFHGGELKKPEVKAAWEAVDTLAKKSICLRRTFQTGEAK
GKNANRKSGKKIVEATAYVCGLGFYEFSLNGKKIGDSEFAPLWSDYDKSVYYNTYDVTEQLQDGENVVGILLGNGFYNVQ
GGRYRKLQISFGPPTLLFELVINYEDGTRETIRSDHEWKYDLSPITFNCIYGGEDYDARREQKGWNQVGFNDSHWRPVVV
QEAPKGVLRSQMAPPVKIMERYDIQKVTKLNSEQVMAASKSTKRTVDPSAVVLDMGQNLAGFPEITVRGKRGQKVTLIVA
EALMDEGACNQRQTGRQHYYEYTLKGEGDEIWHPRFSYYGFRYIQVEGAVLKGQKNPQKLPVLKNIQSCFIYNSAKKVST
FESSNRIFNAAHRLIEKAVRSNMQSVFTDCPHREKLGWLEQVHLNGPGLLYNYDLTAYAPQIMQNMADAQHPNGAMPTTA
PEYVVFEGPGMDAFAESPEWGGSLVIFPFMYYETYGDDSLIKKYYQHMRRYTDYLKTRADNGILSFGLGDWYDYGDFRAG
FSRNTPVPLVATAHYYMTVMYLIKAARMVGNEFDVRYYSSLAYDIMVAFNKRFLDSNTAQYGTGSQASNALPIFLQMIQS
TGDKGDYTPDASLAAKVLTNLIKDVESHGNRLTTGDVGNRYLIQTLARNGQHELIYKMFNHEEAPGYGFQLKFGATTLTE
QWDPRQGSSWNHFMMGQIDEWFFNSLIGIRPSTTLSASVNEKDEPMQGYQKFVIAPKPVGDLKYVKSTYETLYGTILVDW
TRQSGTFTLNVSVPVNTTAIVYLPGEKEPKEVQSGTYKFVAAE

Sequences:

>Translated_923_residues
MQEGLVVVESCPRLGWAMESPENGTRQTAYEIEIREAFTGRSVWNSGKVTSSQSQLVPTEGADICLNNPFNYSWRVRVWD
ETDTPSEWSQEAKFRLASDDLSSGKWIGAITRKDSHLPEGRKFHGGELKKPEVKAAWEAVDTLAKKSICLRRTFQTGEAK
GKNANRKSGKKIVEATAYVCGLGFYEFSLNGKKIGDSEFAPLWSDYDKSVYYNTYDVTEQLQDGENVVGILLGNGFYNVQ
GGRYRKLQISFGPPTLLFELVINYEDGTRETIRSDHEWKYDLSPITFNCIYGGEDYDARREQKGWNQVGFNDSHWRPVVV
QEAPKGVLRSQMAPPVKIMERYDIQKVTKLNSEQVMAASKSTKRTVDPSAVVLDMGQNLAGFPEITVRGKRGQKVTLIVA
EALMDEGACNQRQTGRQHYYEYTLKGEGDEIWHPRFSYYGFRYIQVEGAVLKGQKNPQKLPVLKNIQSCFIYNSAKKVST
FESSNRIFNAAHRLIEKAVRSNMQSVFTDCPHREKLGWLEQVHLNGPGLLYNYDLTAYAPQIMQNMADAQHPNGAMPTTA
PEYVVFEGPGMDAFAESPEWGGSLVIFPFMYYETYGDDSLIKKYYQHMRRYTDYLKTRADNGILSFGLGDWYDYGDFRAG
FSRNTPVPLVATAHYYMTVMYLIKAARMVGNEFDVRYYSSLAYDIMVAFNKRFLDSNTAQYGTGSQASNALPIFLQMIQS
TGDKGDYTPDASLAAKVLTNLIKDVESHGNRLTTGDVGNRYLIQTLARNGQHELIYKMFNHEEAPGYGFQLKFGATTLTE
QWDPRQGSSWNHFMMGQIDEWFFNSLIGIRPSTTLSASVNEKDEPMQGYQKFVIAPKPVGDLKYVKSTYETLYGTILVDW
TRQSGTFTLNVSVPVNTTAIVYLPGEKEPKEVQSGTYKFVAAE
>Mature_923_residues
MQEGLVVVESCPRLGWAMESPENGTRQTAYEIEIREAFTGRSVWNSGKVTSSQSQLVPTEGADICLNNPFNYSWRVRVWD
ETDTPSEWSQEAKFRLASDDLSSGKWIGAITRKDSHLPEGRKFHGGELKKPEVKAAWEAVDTLAKKSICLRRTFQTGEAK
GKNANRKSGKKIVEATAYVCGLGFYEFSLNGKKIGDSEFAPLWSDYDKSVYYNTYDVTEQLQDGENVVGILLGNGFYNVQ
GGRYRKLQISFGPPTLLFELVINYEDGTRETIRSDHEWKYDLSPITFNCIYGGEDYDARREQKGWNQVGFNDSHWRPVVV
QEAPKGVLRSQMAPPVKIMERYDIQKVTKLNSEQVMAASKSTKRTVDPSAVVLDMGQNLAGFPEITVRGKRGQKVTLIVA
EALMDEGACNQRQTGRQHYYEYTLKGEGDEIWHPRFSYYGFRYIQVEGAVLKGQKNPQKLPVLKNIQSCFIYNSAKKVST
FESSNRIFNAAHRLIEKAVRSNMQSVFTDCPHREKLGWLEQVHLNGPGLLYNYDLTAYAPQIMQNMADAQHPNGAMPTTA
PEYVVFEGPGMDAFAESPEWGGSLVIFPFMYYETYGDDSLIKKYYQHMRRYTDYLKTRADNGILSFGLGDWYDYGDFRAG
FSRNTPVPLVATAHYYMTVMYLIKAARMVGNEFDVRYYSSLAYDIMVAFNKRFLDSNTAQYGTGSQASNALPIFLQMIQS
TGDKGDYTPDASLAAKVLTNLIKDVESHGNRLTTGDVGNRYLIQTLARNGQHELIYKMFNHEEAPGYGFQLKFGATTLTE
QWDPRQGSSWNHFMMGQIDEWFFNSLIGIRPSTTLSASVNEKDEPMQGYQKFVIAPKPVGDLKYVKSTYETLYGTILVDW
TRQSGTFTLNVSVPVNTTAIVYLPGEKEPKEVQSGTYKFVAAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 104423; Mature: 104423

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEGLVVVESCPRLGWAMESPENGTRQTAYEIEIREAFTGRSVWNSGKVTSSQSQLVPTE
CCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCC
GADICLNNPFNYSWRVRVWDETDTPSEWSQEAKFRLASDDLSSGKWIGAITRKDSHLPEG
CCCEEECCCCCCEEEEEEECCCCCCHHHHHHHCEEEECCCCCCCCEEEEEECCCCCCCCC
RKFHGGELKKPEVKAAWEAVDTLAKKSICLRRTFQTGEAKGKNANRKSGKKIVEATAYVC
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
GLGFYEFSLNGKKIGDSEFAPLWSDYDKSVYYNTYDVTEQLQDGENVVGILLGNGFYNVQ
CCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCEEEEEEECCEEECC
GGRYRKLQISFGPPTLLFELVINYEDGTRETIRSDHEWKYDLSPITFNCIYGGEDYDARR
CCEEEEEEEECCCHHEEEEEEEECCCCCHHHHCCCCCEEEECCCEEEEEEECCCCCCHHH
EQKGWNQVGFNDSHWRPVVVQEAPKGVLRSQMAPPVKIMERYDIQKVTKLNSEQVMAASK
HHCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCHHHHHHHCHHHHHHCCCHHHHHHCC
STKRTVDPSAVVLDMGQNLAGFPEITVRGKRGQKVTLIVAEALMDEGACNQRQTGRQHYY
CCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCEEEEEEEHHHHCCCCCCCHHCCCCEEE
EYTLKGEGDEIWHPRFSYYGFRYIQVEGAVLKGQKNPQKLPVLKNIQSCFIYNSAKKVST
EEEEECCCCCCCCCCHHHCCEEEEEEECEEECCCCCCCCCCHHHHHHHHEEECCCHHHHH
FESSNRIFNAAHRLIEKAVRSNMQSVFTDCPHREKLGWLEQVHLNGPGLLYNYDLTAYAP
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEECCCEEEEECCHHHHHH
QIMQNMADAQHPNGAMPTTAPEYVVFEGPGMDAFAESPEWGGSLVIFPFMYYETYGDDSL
HHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHCCCCCCCCCEEEEEEEEEEECCCHHH
IKKYYQHMRRYTDYLKTRADNGILSFGLGDWYDYGDFRAGFSRNTPVPLVATAHYYMTVM
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHCCCCCCCCCCEEEHHHHHHHHH
YLIKAARMVGNEFDVRYYSSLAYDIMVAFNKRFLDSNTAQYGTGSQASNALPIFLQMIQS
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHC
TGDKGDYTPDASLAAKVLTNLIKDVESHGNRLTTGDVGNRYLIQTLARNGQHELIYKMFN
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHC
HEEAPGYGFQLKFGATTLTEQWDPRQGSSWNHFMMGQIDEWFFNSLIGIRPSTTLSASVN
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHCCCCCCEEEECCC
EKDEPMQGYQKFVIAPKPVGDLKYVKSTYETLYGTILVDWTRQSGTFTLNVSVPVNTTAI
CCCCHHHHHHEEEECCCCCCHHHHHHHHHHHHEEEEEEEEECCCCEEEEEEEECCCCEEE
VYLPGEKEPKEVQSGTYKFVAAE
EEECCCCCHHHHCCCCEEEEEEC
>Mature Secondary Structure
MQEGLVVVESCPRLGWAMESPENGTRQTAYEIEIREAFTGRSVWNSGKVTSSQSQLVPTE
CCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCC
GADICLNNPFNYSWRVRVWDETDTPSEWSQEAKFRLASDDLSSGKWIGAITRKDSHLPEG
CCCEEECCCCCCEEEEEEECCCCCCHHHHHHHCEEEECCCCCCCCEEEEEECCCCCCCCC
RKFHGGELKKPEVKAAWEAVDTLAKKSICLRRTFQTGEAKGKNANRKSGKKIVEATAYVC
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
GLGFYEFSLNGKKIGDSEFAPLWSDYDKSVYYNTYDVTEQLQDGENVVGILLGNGFYNVQ
CCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCEEEEEEECCEEECC
GGRYRKLQISFGPPTLLFELVINYEDGTRETIRSDHEWKYDLSPITFNCIYGGEDYDARR
CCEEEEEEEECCCHHEEEEEEEECCCCCHHHHCCCCCEEEECCCEEEEEEECCCCCCHHH
EQKGWNQVGFNDSHWRPVVVQEAPKGVLRSQMAPPVKIMERYDIQKVTKLNSEQVMAASK
HHCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCHHHHHHHCHHHHHHCCCHHHHHHCC
STKRTVDPSAVVLDMGQNLAGFPEITVRGKRGQKVTLIVAEALMDEGACNQRQTGRQHYY
CCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCEEEEEEEHHHHCCCCCCCHHCCCCEEE
EYTLKGEGDEIWHPRFSYYGFRYIQVEGAVLKGQKNPQKLPVLKNIQSCFIYNSAKKVST
EEEEECCCCCCCCCCHHHCCEEEEEEECEEECCCCCCCCCCHHHHHHHHEEECCCHHHHH
FESSNRIFNAAHRLIEKAVRSNMQSVFTDCPHREKLGWLEQVHLNGPGLLYNYDLTAYAP
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEECCCEEEEECCHHHHHH
QIMQNMADAQHPNGAMPTTAPEYVVFEGPGMDAFAESPEWGGSLVIFPFMYYETYGDDSL
HHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHCCCCCCCCCEEEEEEEEEEECCCHHH
IKKYYQHMRRYTDYLKTRADNGILSFGLGDWYDYGDFRAGFSRNTPVPLVATAHYYMTVM
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHCCCCCCCCCCEEEHHHHHHHHH
YLIKAARMVGNEFDVRYYSSLAYDIMVAFNKRFLDSNTAQYGTGSQASNALPIFLQMIQS
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHC
TGDKGDYTPDASLAAKVLTNLIKDVESHGNRLTTGDVGNRYLIQTLARNGQHELIYKMFN
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHC
HEEAPGYGFQLKFGATTLTEQWDPRQGSSWNHFMMGQIDEWFFNSLIGIRPSTTLSASVN
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHCCCCCCEEEECCC
EKDEPMQGYQKFVIAPKPVGDLKYVKSTYETLYGTILVDWTRQSGTFTLNVSVPVNTTAI
CCCCHHHHHHEEEECCCCCCHHHHHHHHHHHHEEEEEEEEECCCCEEEEEEEECCCCEEE
VYLPGEKEPKEVQSGTYKFVAAE
EEECCCCCHHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA