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The map label for this gene is rcsB [C]

Identifier: 29144777

GI number: 29144777

Start: 4685834

End: 4686184

Strand: Direct

Name: rcsB [C]

Synonym: t4539

Alternate gene names: 29144777

Gene position: 4685834-4686184 (Clockwise)

Preceding gene: 29144776

Following gene: 29144778

Centisome position: 97.79

GC content: 56.7

Gene sequence:

>351_bases
ATGGCGTCTGCTTTGACCGCTTTCCCGGAAGACGGGGACATCAGCCGGATATGGTACGATCGGCTTTGTATCGAATTTAA
CAGCGACGGCGGACTGAGTCCGGCTGAACTGCGGGTTATCCGACTGCTGCTGCAGGGCTATAACTGCGGGCAGATTGCTG
CCCTCTGTTTTCGCAGCGTCAAAACCATTTCAGCCCAGAAAGGCCTGGCTTTCAGGCGCCTCGGCGTCAGGAATGATGCC
ACCCTGTTGCCAACCCTGATGCTTCTGGGGATGGTGACACTGTATACAGACCTGAACCGGTGTCATTCACTGGAGGAGAG
CGGCCCGGAATGTGGGTCGGAAGCTGGATAA

Upstream 100 bases:

>100_bases
CTGCCGGACTCAGTATCTACCAGGTCCGCTCATATCTTGAGCAACTCCGTGCTGTCGGGGTGCTTGAGAAAGTAAATGCC
GGAAAGGGAGCGCCCGGATT

Downstream 100 bases:

>100_bases
GTATCACTGAAAGTTATTTTATCATGTTCATGAAATTCGTTTATTACGCCTGTCTGGCCGTCGTCATATTAATGGCAATG
GTCTTTTGTGTGTCAGTGCT

Product: GerE family regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MASALTAFPEDGDISRIWYDRLCIEFNSDGGLSPAELRVIRLLLQGYNCGQIAALCFRSVKTISAQKGLAFRRLGVRNDA
TLLPTLMLLGMVTLYTDLNRCHSLEESGPECGSEAG

Sequences:

>Translated_116_residues
MASALTAFPEDGDISRIWYDRLCIEFNSDGGLSPAELRVIRLLLQGYNCGQIAALCFRSVKTISAQKGLAFRRLGVRNDA
TLLPTLMLLGMVTLYTDLNRCHSLEESGPECGSEAG
>Mature_115_residues
ASALTAFPEDGDISRIWYDRLCIEFNSDGGLSPAELRVIRLLLQGYNCGQIAALCFRSVKTISAQKGLAFRRLGVRNDAT
LLPTLMLLGMVTLYTDLNRCHSLEESGPECGSEAG

Specific function: Rcsb Is A Member Of The Two-Component Regulatory System Rcsb/Rcsc, Which Regulates The Expression Of Genes Involved In Colanic Acid Capsule Synthesis. Rcsb Acts As The Effector. Additional Control Is Provided By The Dependence On The Alternate Sigma Facto

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12656; Mature: 12525

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASALTAFPEDGDISRIWYDRLCIEFNSDGGLSPAELRVIRLLLQGYNCGQIAALCFRSV
CCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
KTISAQKGLAFRRLGVRNDATLLPTLMLLGMVTLYTDLNRCHSLEESGPECGSEAG
HHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ASALTAFPEDGDISRIWYDRLCIEFNSDGGLSPAELRVIRLLLQGYNCGQIAALCFRSV
CCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
KTISAQKGLAFRRLGVRNDATLLPTLMLLGMVTLYTDLNRCHSLEESGPECGSEAG
HHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA