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The map label for this gene is yfcC [C]

Identifier: 29144743

GI number: 29144743

Start: 4644775

End: 4646178

Strand: Reverse

Name: yfcC [C]

Synonym: t4498

Alternate gene names: 29144743

Gene position: 4646178-4644775 (Counterclockwise)

Preceding gene: 29144744

Following gene: 29144742

Centisome position: 96.96

GC content: 56.77

Gene sequence:

>1404_bases
ATGGGTAAATTTAAATTTCCCACCGCTTATACCATCCTGTTTATTCTTATTGCCCTGGTCGCGGTGATGACCTGGATTGT
GCCGGCGGGAAAATACCAAATGGCGATGAACGCCACGCTGGGAAAAGAGGTGCCGGTGGCGGGAACGTATGCCCCCGTGG
ACGCGCATCCGCAAGGGATTACCGCTGTTTTACTGGCGCCGATTGACGGCCTCTATAACCACGAAACCTACACCGCCGGC
GCCATTGACGTCGCGCTGTTTGTCTTGATTATCGGCGGCTTTCTGGGGGTGGTGAATAAAACGGGGGCGATTGATGCCGG
TATTGAACGGGTAACTATCAAACTCAACGGCAAAGATGAGTGGATGATCCCCATTCTGATGGCGCTGTTCGCCGCAGGCG
GCACTATCTATGGCATGGCGGAGGAGTCGTTGCCCTTCTACACGCTGCTGGTGCCGGTCATGATGGCGGCCCGCTTCGAT
CCGTTAGTGGCGACGGCAACCGTACTGCTCGGCGCGGGGATAGGCACGCTCGGTTCGACCATTAATCCTTTCGCCACGGT
CATTGCCGCCAACGCCGCCGGCATCCCTTTTACGCAGGGCATGCTGATGCGTGTACTGCTGTTAATTGTCGGCTACGTAC
TGTGCGTGTTTTGGGTAATGCGCTATGCGCGCAAAGTCCGCGCCCATCCTGAGCTTTCTATCGTGGCGGATAAAATGGCG
GAAAACCGCGCCCATTTCCTCGGCAATCGCGCCAATACACTGCTGGAGTTTACGGCTACCCGGAAATGGGTGCTGCTGAT
CTTCGCCGCCTCTTTCGCGGTGATGATTTACGGCGTGGCGGTTCTCGGCTGGTGGATGGCGGAAATCTCCGGCGTCTTTC
TGGCGGCGGCGATTATCGTTGGCGTGATAACGCGGATGGGCGAGGAAGCGTTCACCAGTACCTTTATCGACGGCGCGCGG
GATTTGCTCGGCGTGGCGCTAATTATTGGTATCGCGCGCGGCATTGTGGTGGTCATGGATAACGGTATGATTACCCACAC
CATTTTGCACAGCGCGGAAAGTCTGGTTTCCGGCCTCTCTACCACCATTTTCATAAACGTAACCTACTGGCTGGAAGTAT
TGCTCTCCTTCCTGGTGCCCTCCTCTTCCGGTCTTGCCGTATTGACGATGCCCATTATGGCGCCGTTAGCGGATTTTGCC
CACGTACAGCGGGATTTGGTCGTAACCGCCTACCAGTCGGCCTCCGGGATTGTGAACCTGGTTACGCCCACCTCCGCCGT
GGTCATGGGCGGTCTGGCGATCGCGCGGGTTCCCTATGTTCGCTATCTGAAATGGGTCGCGCCGCTGTTGCTGATCCTGA
CATTGCTGAATATGGCGGTACTGAGCATCGGAGCGATGATGTAA

Upstream 100 bases:

>100_bases
ATGCACACCATCAAAGCGGTCATGGTGGCGACGCTCGGCGACTAATCCCACAGGATATGCGCCCTCGCGGCGCATATCCG
TGATATCAGGAGAGAACATC

Downstream 100 bases:

>100_bases
CGAGCCAGATGGCGACGCGTCTTATCCGACAGGACTGATAAGCACAGCGCCATCAGGCACGCCGTCACCTTTTTTGATCA
GCTTCTCATTTTCCTGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MGKFKFPTAYTILFILIALVAVMTWIVPAGKYQMAMNATLGKEVPVAGTYAPVDAHPQGITAVLLAPIDGLYNHETYTAG
AIDVALFVLIIGGFLGVVNKTGAIDAGIERVTIKLNGKDEWMIPILMALFAAGGTIYGMAEESLPFYTLLVPVMMAARFD
PLVATATVLLGAGIGTLGSTINPFATVIAANAAGIPFTQGMLMRVLLLIVGYVLCVFWVMRYARKVRAHPELSIVADKMA
ENRAHFLGNRANTLLEFTATRKWVLLIFAASFAVMIYGVAVLGWWMAEISGVFLAAAIIVGVITRMGEEAFTSTFIDGAR
DLLGVALIIGIARGIVVVMDNGMITHTILHSAESLVSGLSTTIFINVTYWLEVLLSFLVPSSSGLAVLTMPIMAPLADFA
HVQRDLVVTAYQSASGIVNLVTPTSAVVMGGLAIARVPYVRYLKWVAPLLLILTLLNMAVLSIGAMM

Sequences:

>Translated_467_residues
MGKFKFPTAYTILFILIALVAVMTWIVPAGKYQMAMNATLGKEVPVAGTYAPVDAHPQGITAVLLAPIDGLYNHETYTAG
AIDVALFVLIIGGFLGVVNKTGAIDAGIERVTIKLNGKDEWMIPILMALFAAGGTIYGMAEESLPFYTLLVPVMMAARFD
PLVATATVLLGAGIGTLGSTINPFATVIAANAAGIPFTQGMLMRVLLLIVGYVLCVFWVMRYARKVRAHPELSIVADKMA
ENRAHFLGNRANTLLEFTATRKWVLLIFAASFAVMIYGVAVLGWWMAEISGVFLAAAIIVGVITRMGEEAFTSTFIDGAR
DLLGVALIIGIARGIVVVMDNGMITHTILHSAESLVSGLSTTIFINVTYWLEVLLSFLVPSSSGLAVLTMPIMAPLADFA
HVQRDLVVTAYQSASGIVNLVTPTSAVVMGGLAIARVPYVRYLKWVAPLLLILTLLNMAVLSIGAMM
>Mature_466_residues
GKFKFPTAYTILFILIALVAVMTWIVPAGKYQMAMNATLGKEVPVAGTYAPVDAHPQGITAVLLAPIDGLYNHETYTAGA
IDVALFVLIIGGFLGVVNKTGAIDAGIERVTIKLNGKDEWMIPILMALFAAGGTIYGMAEESLPFYTLLVPVMMAARFDP
LVATATVLLGAGIGTLGSTINPFATVIAANAAGIPFTQGMLMRVLLLIVGYVLCVFWVMRYARKVRAHPELSIVADKMAE
NRAHFLGNRANTLLEFTATRKWVLLIFAASFAVMIYGVAVLGWWMAEISGVFLAAAIIVGVITRMGEEAFTSTFIDGARD
LLGVALIIGIARGIVVVMDNGMITHTILHSAESLVSGLSTTIFINVTYWLEVLLSFLVPSSSGLAVLTMPIMAPLADFAH
VQRDLVVTAYQSASGIVNLVTPTSAVVMGGLAIARVPYVRYLKWVAPLLLILTLLNMAVLSIGAMM

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycgA [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=501, Percent_Identity=29.1417165668663, Blast_Score=207, Evalue=8e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 49845; Mature: 49714

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKFKFPTAYTILFILIALVAVMTWIVPAGKYQMAMNATLGKEVPVAGTYAPVDAHPQGI
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
TAVLLAPIDGLYNHETYTAGAIDVALFVLIIGGFLGVVNKTGAIDAGIERVTIKLNGKDE
CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCC
WMIPILMALFAAGGTIYGMAEESLPFYTLLVPVMMAARFDPLVATATVLLGAGIGTLGST
HHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCC
INPFATVIAANAAGIPFTQGMLMRVLLLIVGYVLCVFWVMRYARKVRAHPELSIVADKMA
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ENRAHFLGNRANTLLEFTATRKWVLLIFAASFAVMIYGVAVLGWWMAEISGVFLAAAIIV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVITRMGEEAFTSTFIDGARDLLGVALIIGIARGIVVVMDNGMITHTILHSAESLVSGLS
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCC
TTIFINVTYWLEVLLSFLVPSSSGLAVLTMPIMAPLADFAHVQRDLVVTAYQSASGIVNL
CEEEEEHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEE
VTPTSAVVMGGLAIARVPYVRYLKWVAPLLLILTLLNMAVLSIGAMM
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GKFKFPTAYTILFILIALVAVMTWIVPAGKYQMAMNATLGKEVPVAGTYAPVDAHPQGI
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
TAVLLAPIDGLYNHETYTAGAIDVALFVLIIGGFLGVVNKTGAIDAGIERVTIKLNGKDE
CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCC
WMIPILMALFAAGGTIYGMAEESLPFYTLLVPVMMAARFDPLVATATVLLGAGIGTLGST
HHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCC
INPFATVIAANAAGIPFTQGMLMRVLLLIVGYVLCVFWVMRYARKVRAHPELSIVADKMA
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ENRAHFLGNRANTLLEFTATRKWVLLIFAASFAVMIYGVAVLGWWMAEISGVFLAAAIIV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVITRMGEEAFTSTFIDGARDLLGVALIIGIARGIVVVMDNGMITHTILHSAESLVSGLS
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCC
TTIFINVTYWLEVLLSFLVPSSSGLAVLTMPIMAPLADFAHVQRDLVVTAYQSASGIVNL
CEEEEEHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEE
VTPTSAVVMGGLAIARVPYVRYLKWVAPLLLILTLLNMAVLSIGAMM
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]