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The map label for this gene is yjeB [H]

Identifier: 29144665

GI number: 29144665

Start: 4569866

End: 4570291

Strand: Direct

Name: yjeB [H]

Synonym: t4418

Alternate gene names: 29144665

Gene position: 4569866-4570291 (Clockwise)

Preceding gene: 29144664

Following gene: 29144666

Centisome position: 95.37

GC content: 48.59

Gene sequence:

>426_bases
GTGCAGTTAACGAGTTTCACCGATTACGGCTTACGTGCGCTAATCTATATGGCGTCGTTACCAGATGGACGAATGACCAG
CATTTCTGAGGTGACAGAAGTCTACGACGTGTCCCGTAATCATATGGTCAAAATTATCAATCAGCTTAGCCGGGCGGGCT
TTGTCACCGCCGTTCGGGGAAAAAATGGCGGTATCCGCCTGGGTAAACCGGCTAATACTATTTGTATTGGCGATGTGGTG
CGTGAGCTGGAACCCTTATCACTGGTCAACTGTAGCAGCGAATTTTGCCACATCACCCCTGCCTGTCGTCTGAAACAGGC
GCTTTCTAAGGCCGTGCAGAGTTTTCTCAAGGAGCTGGATAACTACACGCTTGCCGATTTGGTTGAAGAGAATCAACCGC
TTTATAAATTATTACTGGTGGAGTGA

Upstream 100 bases:

>100_bases
TTTCCTTCCTGAACCGAAATAAATTAGCAGCCTGACAGGTGGCTGGTTTATCATCAATACAGATAAGTTATATCCCGTTT
TCCCTTTTCCTGAGGTTGAT

Downstream 100 bases:

>100_bases
AGTAAACTTCATTAGAGATGACAATGGAGGAACCTCAATGTCACAAGATCCTTTCCAGGAACGCGAAGCAGAAAAATACG
CGAATCCTATCCCGAGCCGG

Product: transcriptional repressor NsrR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MQLTSFTDYGLRALIYMASLPDGRMTSISEVTEVYDVSRNHMVKIINQLSRAGFVTAVRGKNGGIRLGKPANTICIGDVV
RELEPLSLVNCSSEFCHITPACRLKQALSKAVQSFLKELDNYTLADLVEENQPLYKLLLVE

Sequences:

>Translated_141_residues
MQLTSFTDYGLRALIYMASLPDGRMTSISEVTEVYDVSRNHMVKIINQLSRAGFVTAVRGKNGGIRLGKPANTICIGDVV
RELEPLSLVNCSSEFCHITPACRLKQALSKAVQSFLKELDNYTLADLVEENQPLYKLLLVE
>Mature_141_residues
MQLTSFTDYGLRALIYMASLPDGRMTSISEVTEVYDVSRNHMVKIINQLSRAGFVTAVRGKNGGIRLGKPANTICIGDVV
RELEPLSLVNCSSEFCHITPACRLKQALSKAVQSFLKELDNYTLADLVEENQPLYKLLLVE

Specific function: Nitric oxide-sensitive repressor of genes involved in protecting the cell against nitrosative stress. May require iron for activity [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=141, Percent_Identity=94.3262411347518, Blast_Score=274, Evalue=2e-75,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15666; Mature: 15666

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTSFTDYGLRALIYMASLPDGRMTSISEVTEVYDVSRNHMVKIINQLSRAGFVTAVRG
CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEC
KNGGIRLGKPANTICIGDVVRELEPLSLVNCSSEFCHITPACRLKQALSKAVQSFLKELD
CCCCEEECCCCCEEHHHHHHHHCCCCCEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHC
NYTLADLVEENQPLYKLLLVE
CCHHHHHHHCCCCEEEEEECC
>Mature Secondary Structure
MQLTSFTDYGLRALIYMASLPDGRMTSISEVTEVYDVSRNHMVKIINQLSRAGFVTAVRG
CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEC
KNGGIRLGKPANTICIGDVVRELEPLSLVNCSSEFCHITPACRLKQALSKAVQSFLKELD
CCCCEEECCCCCEEHHHHHHHHCCCCCEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHC
NYTLADLVEENQPLYKLLLVE
CCHHHHHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA