Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is yjeN [H]
Identifier: 29144647
GI number: 29144647
Start: 4548203
End: 4548580
Strand: Direct
Name: yjeN [H]
Synonym: t4398
Alternate gene names: 29144647
Gene position: 4548203-4548580 (Clockwise)
Preceding gene: 29144646
Following gene: 29144651
Centisome position: 94.91
GC content: 46.3
Gene sequence:
>378_bases ATGCCGGATAAGGCCCCACGGGTCGCATCCGGCGTTTATTGCCCTATGGAGAACGTGATGAATGATAGTTCGAGAGACCC GATTATCACGGAAGATGAGATTAGGGCACTCAATTTTACTCCGGAAGATATCCTTGAAATAGAAAAGGTTATTCTTTCTT CCGTTCATGTTGCACGTCGAAAGGTTGCGATGGTAGTAGGAATGACTATTGGCACGTTAAGGGATCGCGATGAGGATAAG TGGAAACATGTGTCGGATATTTATTGCGCGTATGTTGTAAGATGCCTCGTATTTCGCGGAGAACTGGTGGGTTACGGCGA TTTATTCCGAATGCGCTATAGCGAAATTAACCTGCCTGTTGCCGATCTGGACGCATAA
Upstream 100 bases:
>100_bases GGCGGCCCGATCTTCTTCTCGCTGCTGGCGATGGCGATTTATCAGAATTACAGCAGCCGCATGAGCGCTGATCCGGAGTG GGCGGCGGAGTAAAGGCCGT
Downstream 100 bases:
>100_bases TAAGTCCGAAAATGTCTGTGAGTTGCGATGAAATGCCCGATGGCGCAAGCTTATCGGGCCTACAGATTAATTGTCGGCCC GTAGGCCGGATAAGACCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MPDKAPRVASGVYCPMENVMNDSSRDPIITEDEIRALNFTPEDILEIEKVILSSVHVARRKVAMVVGMTIGTLRDRDEDK WKHVSDIYCAYVVRCLVFRGELVGYGDLFRMRYSEINLPVADLDA
Sequences:
>Translated_125_residues MPDKAPRVASGVYCPMENVMNDSSRDPIITEDEIRALNFTPEDILEIEKVILSSVHVARRKVAMVVGMTIGTLRDRDEDK WKHVSDIYCAYVVRCLVFRGELVGYGDLFRMRYSEINLPVADLDA >Mature_124_residues PDKAPRVASGVYCPMENVMNDSSRDPIITEDEIRALNFTPEDILEIEKVILSSVHVARRKVAMVVGMTIGTLRDRDEDKW KHVSDIYCAYVVRCLVFRGELVGYGDLFRMRYSEINLPVADLDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790601, Length=103, Percent_Identity=68.9320388349515, Blast_Score=145, Evalue=9e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020528 - ProDom: PD069398 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14223; Mature: 14091
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDKAPRVASGVYCPMENVMNDSSRDPIITEDEIRALNFTPEDILEIEKVILSSVHVARR CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH KVAMVVGMTIGTLRDRDEDKWKHVSDIYCAYVVRCLVFRGELVGYGDLFRMRYSEINLPV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCH ADLDA HCCCC >Mature Secondary Structure PDKAPRVASGVYCPMENVMNDSSRDPIITEDEIRALNFTPEDILEIEKVILSSVHVARR CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH KVAMVVGMTIGTLRDRDEDKWKHVSDIYCAYVVRCLVFRGELVGYGDLFRMRYSEINLPV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCH ADLDA HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]