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The map label for this gene is cI

Identifier: 29144589

GI number: 29144589

Start: 4489195

End: 4489827

Strand: Direct

Name: cI

Synonym: t4337

Alternate gene names: NA

Gene position: 4489195-4489827 (Clockwise)

Preceding gene: 29144575

Following gene: 29144590

Centisome position: 93.68

GC content: 43.13

Gene sequence:

>633_bases
ATGAGTTTAATCAAGGCAGGGAATGATAGTGGTGGGCGCGATGCGATTAACAGGCTTATTAAGGCTTACAATTTCAGCTC
ACGACAGCAGCTCTGCGAACATCTGGAAGTATCAAAAAGCACTATGGCTAACAGATACTTAAGGGATAGTTTCCCTGCTG
AATGGGTAATTCAATGCGCTCTTGAAACAGGAATTTCCCTTCTATGGCTGGCTACGGGCCAAGGAGATATGTATGCGTGT
GAGAACGAAGAAAGAAATCTCAAAAACGAAACCTCCGTCACGGTAAGACCACTTTCTAAAATTGTTGCTCCTAGCATCAA
ACATGTTGAACTGAAGAACGGTGAACTGCAGCCAAGTGATGAAATTCTTCTTGATAGCAGACTGCTCGATGGTGACTCAT
CCAACTCTTTGTTTGTAAAAACAGCTACTGATAGCTTTGTTGTGGATACGTCTGTTAAACAAGTCAGTAATGGCTTCTGG
TTAGTCGATATGGACGGAGTTAAAAGCATCGTCAAAATCGCTCGCGTTCCAGGCAACAAAATTGTAGTTCACCAAGATGA
AACATCATTTGAATGCTCGGTCGACGACATTGAAGCTATCGGGCGTGCAGTCAAAGTAATCAAGAGCCTCTAA

Upstream 100 bases:

>100_bases
GTTTGGGTTCGTTTTATCTTGTTTTATGTGGTTTGATTTTACTTTTCAAACCATGAGCGGATATTAAGATCACTTTTTAT
ATACGTCAAGAGGTTTGATT

Downstream 100 bases:

>100_bases
CTTATGAGCATCAGAAAACAGCCTAACGGAAAATGGTTGTGTGAATGCTACCCGAACGGACGGGATGGCAAGCGTGTACG
CAAGCAATTTGCGACTAAAG

Product: phage repressor protein cI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MSLIKAGNDSGGRDAINRLIKAYNFSSRQQLCEHLEVSKSTMANRYLRDSFPAEWVIQCALETGISLLWLATGQGDMYAC
ENEERNLKNETSVTVRPLSKIVAPSIKHVELKNGELQPSDEILLDSRLLDGDSSNSLFVKTATDSFVVDTSVKQVSNGFW
LVDMDGVKSIVKIARVPGNKIVVHQDETSFECSVDDIEAIGRAVKVIKSL

Sequences:

>Translated_210_residues
MSLIKAGNDSGGRDAINRLIKAYNFSSRQQLCEHLEVSKSTMANRYLRDSFPAEWVIQCALETGISLLWLATGQGDMYAC
ENEERNLKNETSVTVRPLSKIVAPSIKHVELKNGELQPSDEILLDSRLLDGDSSNSLFVKTATDSFVVDTSVKQVSNGFW
LVDMDGVKSIVKIARVPGNKIVVHQDETSFECSVDDIEAIGRAVKVIKSL
>Mature_209_residues
SLIKAGNDSGGRDAINRLIKAYNFSSRQQLCEHLEVSKSTMANRYLRDSFPAEWVIQCALETGISLLWLATGQGDMYACE
NEERNLKNETSVTVRPLSKIVAPSIKHVELKNGELQPSDEILLDSRLLDGDSSNSLFVKTATDSFVVDTSVKQVSNGFWL
VDMDGVKSIVKIARVPGNKIVVHQDETSFECSVDDIEAIGRAVKVIKSL

Specific function: Unknown

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010744 [H]

Pfam domain/function: PF07022 Phage_CI_repr [H]

EC number: NA

Molecular weight: Translated: 23178; Mature: 23046

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIKAGNDSGGRDAINRLIKAYNFSSRQQLCEHLEVSKSTMANRYLRDSFPAEWVIQCA
CCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LETGISLLWLATGQGDMYACENEERNLKNETSVTVRPLSKIVAPSIKHVELKNGELQPSD
HHCCCEEEEEEECCCCEEEECCCCCCCCCCCCEEHHHHHHHHCCCCEEEEECCCCCCCCC
EILLDSRLLDGDSSNSLFVKTATDSFVVDTSVKQVSNGFWLVDMDGVKSIVKIARVPGNK
HHEEHHEEECCCCCCEEEEEECCCCEEEECHHHHHCCCEEEEEHHHHHHHHHHHHCCCCE
IVVHQDETSFECSVDDIEAIGRAVKVIKSL
EEEEECCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLIKAGNDSGGRDAINRLIKAYNFSSRQQLCEHLEVSKSTMANRYLRDSFPAEWVIQCA
CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LETGISLLWLATGQGDMYACENEERNLKNETSVTVRPLSKIVAPSIKHVELKNGELQPSD
HHCCCEEEEEEECCCCEEEECCCCCCCCCCCCEEHHHHHHHHCCCCEEEEECCCCCCCCC
EILLDSRLLDGDSSNSLFVKTATDSFVVDTSVKQVSNGFWLVDMDGVKSIVKIARVPGNK
HHEEHHEEECCCCCCEEEEEECCCCEEEECHHHHHCCCEEEEEHHHHHHHHHHHHCCCCE
IVVHQDETSFECSVDDIEAIGRAVKVIKSL
EEEEECCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]