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The map label for this gene is yrfG [H]

Identifier: 29144278

GI number: 29144278

Start: 4162190

End: 4162900

Strand: Reverse

Name: yrfG [H]

Synonym: t4010

Alternate gene names: 29144278

Gene position: 4162900-4162190 (Counterclockwise)

Preceding gene: 29144279

Following gene: 29144277

Centisome position: 86.87

GC content: 54.29

Gene sequence:

>711_bases
ATGCTACCCTGTCGCGCAAATTGCGTTACCCTGGAGTTCCCCATGCATATTGATATTGACTGGCAAAACGTGGATACCGT
TTTGCTGGATATGGACGGCACGCTGCTCGATCTCGCGTTCGATAACTATTTCTGGCAAAAGCTGGTACCGGAAACCTACG
GCGCGCAGCAGGGTATTTCGCCGCAGGACGCGCAGGAATATATTCGCCAGCAGTATCATGCCGTACAGCATACGCTAAAC
TGGTACTGTCTGGATTACTGGAGCGAGCGTCTGGGTCTGGATATTTGCGCCATGACGACGGCGCAAGGGCCGCGCGCCGT
TTTGCGCGACGATACCGTACCGTTTCTGAATGCGTTAAAAGCCAGCGGAAAACGTCGGATTCTGCTCACCAATGCGCATC
CACATAACCTGGCGGTGAAGCTGGAGCATACCGGTCTGGCCTCACACCTTGATTTATTACTTTCCACCCACACATTTGGT
TATCCCAAAGAGGATCAGCGGTTATGGCGCGCTGTCACTGAGGAAACGGGAATAAGCGCAGAGAAAACGCTGTTTATCGA
TGACAGCGAACCGATTCTCGACGCCGCCGCCCGGTTTGGTATTCGCTACTGTCTTGGCGTGACGAATCCCGATTCCGGTC
TGGCGGAAAAGCACTATACGCGCCATCCGTCCCTGAACGACTACCGCCGTCTGATCCCCTCGCTGAAGTGA

Upstream 100 bases:

>100_bases
CGTATGGCGGACATCCAGGAATACTATGAAAGCTGCCTCAATCCCAGGTTAACCGTCTCTCCGGAAAATCTCATCTGATA
GCGCCGCCGTGCGACAGGGT

Downstream 100 bases:

>100_bases
AGGAGACGCCATGAAAGAAAAGTCCTCCGTTGAGGTCAGACTGGATAAATGGCTGTGGGCCGCGCGTTTTTATAAAACCC
GCGCGCTGGCCCGCGAGATG

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MLPCRANCVTLEFPMHIDIDWQNVDTVLLDMDGTLLDLAFDNYFWQKLVPETYGAQQGISPQDAQEYIRQQYHAVQHTLN
WYCLDYWSERLGLDICAMTTAQGPRAVLRDDTVPFLNALKASGKRRILLTNAHPHNLAVKLEHTGLASHLDLLLSTHTFG
YPKEDQRLWRAVTEETGISAEKTLFIDDSEPILDAAARFGIRYCLGVTNPDSGLAEKHYTRHPSLNDYRRLIPSLK

Sequences:

>Translated_236_residues
MLPCRANCVTLEFPMHIDIDWQNVDTVLLDMDGTLLDLAFDNYFWQKLVPETYGAQQGISPQDAQEYIRQQYHAVQHTLN
WYCLDYWSERLGLDICAMTTAQGPRAVLRDDTVPFLNALKASGKRRILLTNAHPHNLAVKLEHTGLASHLDLLLSTHTFG
YPKEDQRLWRAVTEETGISAEKTLFIDDSEPILDAAARFGIRYCLGVTNPDSGLAEKHYTRHPSLNDYRRLIPSLK
>Mature_236_residues
MLPCRANCVTLEFPMHIDIDWQNVDTVLLDMDGTLLDLAFDNYFWQKLVPETYGAQQGISPQDAQEYIRQQYHAVQHTLN
WYCLDYWSERLGLDICAMTTAQGPRAVLRDDTVPFLNALKASGKRRILLTNAHPHNLAVKLEHTGLASHLDLLLSTHTFG
YPKEDQRLWRAVTEETGISAEKTLFIDDSEPILDAAARFGIRYCLGVTNPDSGLAEKHYTRHPSLNDYRRLIPSLK

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082259, Length=221, Percent_Identity=85.5203619909502, Blast_Score=405, Evalue=1e-114,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 26926; Mature: 26926

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPCRANCVTLEFPMHIDIDWQNVDTVLLDMDGTLLDLAFDNYFWQKLVPETYGAQQGIS
CCCCCCCEEEEEECEEEEEECCCCCEEEEECCCCEEEHHHHHHHHHHHCCHHCCCCCCCC
PQDAQEYIRQQYHAVQHTLNWYCLDYWSERLGLDICAMTTAQGPRAVLRDDTVPFLNALK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHCCCCHHHHHHHH
ASGKRRILLTNAHPHNLAVKLEHTGLASHLDLLLSTHTFGYPKEDQRLWRAVTEETGISA
CCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
EKTLFIDDSEPILDAAARFGIRYCLGVTNPDSGLAEKHYTRHPSLNDYRRLIPSLK
CEEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCHHHHCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MLPCRANCVTLEFPMHIDIDWQNVDTVLLDMDGTLLDLAFDNYFWQKLVPETYGAQQGIS
CCCCCCCEEEEEECEEEEEECCCCCEEEEECCCCEEEHHHHHHHHHHHCCHHCCCCCCCC
PQDAQEYIRQQYHAVQHTLNWYCLDYWSERLGLDICAMTTAQGPRAVLRDDTVPFLNALK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHCCCCHHHHHHHH
ASGKRRILLTNAHPHNLAVKLEHTGLASHLDLLLSTHTFGYPKEDQRLWRAVTEETGISA
CCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
EKTLFIDDSEPILDAAARFGIRYCLGVTNPDSGLAEKHYTRHPSLNDYRRLIPSLK
CEEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCHHHHCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]