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The map label for this gene is dcrB [H]

Identifier: 29144211

GI number: 29144211

Start: 4082428

End: 4082985

Strand: Reverse

Name: dcrB [H]

Synonym: t3942

Alternate gene names: 29144211

Gene position: 4082985-4082428 (Counterclockwise)

Preceding gene: 29144212

Following gene: 29144209

Centisome position: 85.2

GC content: 53.05

Gene sequence:

>558_bases
ATGCGCAATTTGGTTAAATATGCCGGTATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATAACAACGATACAAAAGC
GTCGGCAGAAAGCGCCGCCGCAGAAAGCCAGGCCTCCGGTCAGCCCATCAGCCTGATGGATGGCAAACTCAGTTTCTCAC
TGCCGGCGGATATGACCGATCAAAGCGGTAAGCTGGGCACCCAGGCGAATAATATGCACGTTTATTCTGACCCGACGGGC
CAGAAAGCGGTGATTGTTATCGTCGGCGATAATACCGATGAAGCGTTGCCGGTGCTGGCGAACCGCCTGCTTGAGCAACA
GCGTAGCCGCGACCCGCAGCTTCAGGTCGTCACCAATAAGTCTATTGAGCTCAAAGGCCATACGTTGCAACAGCTGGACA
GCATTATCTCCGCGAAAGGCCAGACGGCGTACTCTTCCATCGTGCTGGGCAAAGTGGATAACCAATTGCTGACGATTCAG
GTCACGCTGCCTGCGGACAATCAGCAAAAAGCGCAAACCACAGCTGAAAACATCATCAATACGTTGGTTATTAAGTAA

Upstream 100 bases:

>100_bases
TGAAATTTCCCCATTACCGGCAAGTTAAAGGTTCGTTTTCCGAGTTGTGATAAGATGAGCGAATGAGCCGTTATGGCCGT
TTATCGAAAGGAAGAAGTCA

Downstream 100 bases:

>100_bases
CCTTCACGACGATGATGCGGCCTCCGGCAGTGCAGACGGAGGCCGTTTTTTTAAGCGCCAGGTCAGTAATAGCGCCATCG
CTACCAGCCCGGCCGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MRNLVKYAGIGLLVMGLAACDNNDTKASAESAAAESQASGQPISLMDGKLSFSLPADMTDQSGKLGTQANNMHVYSDPTG
QKAVIVIVGDNTDEALPVLANRLLEQQRSRDPQLQVVTNKSIELKGHTLQQLDSIISAKGQTAYSSIVLGKVDNQLLTIQ
VTLPADNQQKAQTTAENIINTLVIK

Sequences:

>Translated_185_residues
MRNLVKYAGIGLLVMGLAACDNNDTKASAESAAAESQASGQPISLMDGKLSFSLPADMTDQSGKLGTQANNMHVYSDPTG
QKAVIVIVGDNTDEALPVLANRLLEQQRSRDPQLQVVTNKSIELKGHTLQQLDSIISAKGQTAYSSIVLGKVDNQLLTIQ
VTLPADNQQKAQTTAENIINTLVIK
>Mature_185_residues
MRNLVKYAGIGLLVMGLAACDNNDTKASAESAAAESQASGQPISLMDGKLSFSLPADMTDQSGKLGTQANNMHVYSDPTG
QKAVIVIVGDNTDEALPVLANRLLEQQRSRDPQLQVVTNKSIELKGHTLQQLDSIISAKGQTAYSSIVLGKVDNQLLTIQ
VTLPADNQQKAQTTAENIINTLVIK

Specific function: Required for phage C1 adsorption [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082269, Length=185, Percent_Identity=80, Blast_Score=306, Evalue=8e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014894 [H]

Pfam domain/function: PF08786 DUF1795 [H]

EC number: NA

Molecular weight: Translated: 19688; Mature: 19688

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLVKYAGIGLLVMGLAACDNNDTKASAESAAAESQASGQPISLMDGKLSFSLPADMTD
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCC
QSGKLGTQANNMHVYSDPTGQKAVIVIVGDNTDEALPVLANRLLEQQRSRDPQLQVVTNK
CCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECC
SIELKGHTLQQLDSIISAKGQTAYSSIVLGKVDNQLLTIQVTLPADNQQKAQTTAENIIN
EEEECCCHHHHHHHHHHCCCCCHHHEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHH
TLVIK
HHCCC
>Mature Secondary Structure
MRNLVKYAGIGLLVMGLAACDNNDTKASAESAAAESQASGQPISLMDGKLSFSLPADMTD
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCC
QSGKLGTQANNMHVYSDPTGQKAVIVIVGDNTDEALPVLANRLLEQQRSRDPQLQVVTNK
CCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECC
SIELKGHTLQQLDSIISAKGQTAYSSIVLGKVDNQLLTIQVTLPADNQQKAQTTAENIIN
EEEECCCHHHHHHHHHHCCCCCHHHEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHH
TLVIK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 8752353 [H]