Click here to switch to the map view.

The map label for this gene is yhhT [H]

Identifier: 29144209

GI number: 29144209

Start: 4080026

End: 4081075

Strand: Reverse

Name: yhhT [H]

Synonym: t3940

Alternate gene names: 29144209

Gene position: 4081075-4080026 (Counterclockwise)

Preceding gene: 29144211

Following gene: 29144208

Centisome position: 85.17

GC content: 51.43

Gene sequence:

>1050_bases
ATGGCAACCGCTCAACCCGACAAAACGGGTATGCATATTCTGCTGAAACTGGCCTCCCTGGTTATTATTCTCGCCGGGAT
TCATGCCGCGGCGGATATTATTGTACAACTCTTACTGGCGCTCTTTTTCGCCATCGTTCTTAATCCATTAGTGACCTGGT
TTATTCGCCGGGGCGTGAAGCGACCGCTGGCGATTACTATCGTGGTGGTCGTCATGCTGATCGTGCTTACCGCGCTGGTG
GGTGTGCTTGCCGCATCGCTTAATGAATTTATCGCTATGCTGCCTAAATACAGCAAGGAGCTGACGCGTAAGGTTTTACA
TCTTCAGGAGTTAATGCCCTTCCTGAATTTACATATGTCGCCGGAACGTATGCTCCGTGGGATGGATTCCGATAAAATCA
TGCTCTTCACCACAACATTAATGACCGGCGTATCGGGCGCGATGGCAAGCATTGTGCTGCTGGTGATGACCGTGGTTTTT
ATGCTGTTTGAGGTGCGTCACGTGCCTTATAAATTACGTTTCGCGCTTAACAATCCACAAATCCATATTGCCGGCCTGCA
CCGCGCCCTGAAAGGCGTCTCGCATTATCTGGCGCTGAAAACGCTGCTCAGTCTATGGACGGGCGCGATTATCTGGCTGG
GGCTGGCATTAATGGATATTCAGTTTGCGCTAATGTGGGGCGTACTGGCCTTTTTGCTCAATTACGTTCCTAATATCGGC
TCGGTGATTTCCGCCGTTCCCCCCATGATTCAGGCGTTGTTATTTAACGGCTTTTACGAATGCGTACTGGTCGGCGCGCT
CTTTTTGGTGGTTCATATGGTGATTGGCAACATTATGGAGCCACGCATGATGGGCCATCGTCTGGGGATGTCCACGCTGG
TGGTATTTCTTTCGTTACTGGTCTGGGGATGGCTATTAGGCCCGGTCGGGATGCTCTTGTCCGTTCCTTTGACCAGCGTC
TGCAAAATCTGGATGGAAACCACTAAAGGCGGCAGCAAACTGGCGATCTTACTGGGGCCAGGCCGACCGAAAAGCCGTTT
ACCGGGATGA

Upstream 100 bases:

>100_bases
TTTTCTATCATGGCGCGCGGTGAAAATCAGTAGTGAGATTCAGATTATCGGTATCAGGGCAGCCGCTACACTTAGAAAAA
AACACAACAAGGAAAACTTC

Downstream 100 bases:

>100_bases
GGCGACAGATGCTACAATCTCCTCTTCTTCATAGGCAACGTTGGTCCTGATATGTACCAGATCGTTCTGGGAAAAGTGTC
AACATTAAGCGCAGGTCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MATAQPDKTGMHILLKLASLVIILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVKRPLAITIVVVVMLIVLTALV
GVLAASLNEFIAMLPKYSKELTRKVLHLQELMPFLNLHMSPERMLRGMDSDKIMLFTTTLMTGVSGAMASIVLLVMTVVF
MLFEVRHVPYKLRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGAIIWLGLALMDIQFALMWGVLAFLLNYVPNIG
SVISAVPPMIQALLFNGFYECVLVGALFLVVHMVIGNIMEPRMMGHRLGMSTLVVFLSLLVWGWLLGPVGMLLSVPLTSV
CKIWMETTKGGSKLAILLGPGRPKSRLPG

Sequences:

>Translated_349_residues
MATAQPDKTGMHILLKLASLVIILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVKRPLAITIVVVVMLIVLTALV
GVLAASLNEFIAMLPKYSKELTRKVLHLQELMPFLNLHMSPERMLRGMDSDKIMLFTTTLMTGVSGAMASIVLLVMTVVF
MLFEVRHVPYKLRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGAIIWLGLALMDIQFALMWGVLAFLLNYVPNIG
SVISAVPPMIQALLFNGFYECVLVGALFLVVHMVIGNIMEPRMMGHRLGMSTLVVFLSLLVWGWLLGPVGMLLSVPLTSV
CKIWMETTKGGSKLAILLGPGRPKSRLPG
>Mature_348_residues
ATAQPDKTGMHILLKLASLVIILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVKRPLAITIVVVVMLIVLTALVG
VLAASLNEFIAMLPKYSKELTRKVLHLQELMPFLNLHMSPERMLRGMDSDKIMLFTTTLMTGVSGAMASIVLLVMTVVFM
LFEVRHVPYKLRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGAIIWLGLALMDIQFALMWGVLAFLLNYVPNIGS
VISAVPPMIQALLFNGFYECVLVGALFLVVHMVIGNIMEPRMMGHRLGMSTLVVFLSLLVWGWLLGPVGMLLSVPLTSVC
KIWMETTKGGSKLAILLGPGRPKSRLPG

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI87082271, Length=349, Percent_Identity=88.8252148997135, Blast_Score=629, Evalue=0.0,
Organism=Escherichia coli, GI1787885, Length=331, Percent_Identity=48.036253776435, Blast_Score=281, Evalue=4e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38360; Mature: 38229

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATAQPDKTGMHILLKLASLVIILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RPLAITIVVVVMLIVLTALVGVLAASLNEFIAMLPKYSKELTRKVLHLQELMPFLNLHMS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PERMLRGMDSDKIMLFTTTLMTGVSGAMASIVLLVMTVVFMLFEVRHVPYKLRFALNNPQ
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
IHIAGLHRALKGVSHYLALKTLLSLWTGAIIWLGLALMDIQFALMWGVLAFLLNYVPNIG
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
SVISAVPPMIQALLFNGFYECVLVGALFLVVHMVIGNIMEPRMMGHRLGMSTLVVFLSLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKLAILLGPGRPKSRLPG
HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
ATAQPDKTGMHILLKLASLVIILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC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HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]