Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is waaK [H]
Identifier: 29144085
GI number: 29144085
Start: 3923929
End: 3925074
Strand: Direct
Name: waaK [H]
Synonym: t3805
Alternate gene names: 29144085
Gene position: 3923929-3925074 (Clockwise)
Preceding gene: 29144084
Following gene: 29144090
Centisome position: 81.89
GC content: 41.54
Gene sequence:
>1146_bases ATGATTAAAAAAATCATATTTACTGTTACTCCTATATTTTCAATTCCTCCTCGTGGCGCGGCTGCGGTAGAAACCTGGAT TTACCAGGTTGCAAAACGATTATCAATACCGAATGCTATTGCTTGTATAAAGAATGCCGGCTATCCTGAATATAATAAAA TAAACGATAACTGTGATATTCATTACATTGGGTTTAGTAAAGTTTATAAGCGTCTTTTTCAGAAATGGGCTCGTCTCGAC CCACTACCCTATTCCCAGCGCATCCTTAATATTAGAGATAAAGTGACTACCCAGGAAGATAGCGTCATTGTTATTCATAA TAGTATGAAACTGTATCGGCAGATCAGAGAGCGCAATCCGAATGCAAAACTGGTTATGCACATGCATAACGCATTTGAAC CAGAACTTCCTGATACGGATGCAAAAATTATCGTGCCCAGTCAGTTTCTTAAAGCGTTTTATGAAGAAAGATTGCCCGCC GCTGCTGTTAGTATTGTGCCTAATGGTTTTTGTGCTGAGACTTATAAAAGAAACCCACAAGATAATCTTCGTCAGCAATT AAATATTGCGGAAGATGCCACCGTTCTCTTATATGCCGGGAGAATTTCGCCTGATAAAGGCATCCTGTTGCTTTTGCAGG CGTTCAAACAATTACGTACCTTAAGAAGTAATATTAAACTTGTCGTTGTTGGCGACCCTTATGCAAGCCGCAAGGGTGAA AAAGCAGAGTATCAAAAGAAAGTACTGGACGCCGCAAAAGAGATTGGAACTGATTGCATTATGGCTGGAGGGCAATCACC TGACCAGATGCATAACTTCTATCATATAGCCGATCTGGTTATCGTGCCATCTCAGGTTGAAGAAGCATTTTGCATGGTGG CTGTAGAAGCGATGGCAGCAGGAAAAGCGGTTCTTGCCAGCAAAAAAGGGGGGATTAGCGAATTTGTGTTAGATGGCATA ACGGGCTATCACCTCGCAGAACCTATGTCGAGCGACAGTATAATTAATGATATTAACCGTGCGCTTGCTGATAAGGAACG CCACCAGATTGCCGAAAAAGCAAAATCCCTGGTGTTTTCAAAATACAGTTGGGAAAATGTAGCGCAGCGTTTCGAGGAAC AAATGAAAAGCTGGTTTGATAAGTGA
Upstream 100 bases:
>100_bases AGACACTAGATAAATCATTATTTTGCGTTGCTTCGGCACGCATTTCTTTTTCTATAATATATCTTTTCTATAAAGTTAAC TATTCTGGATTATAGCTATT
Downstream 100 bases:
>100_bases TTGAGTCCTGATGATGGAAAACGCGCTGATACCGTAATAAGTATCAGCGCGCTTTTTTATCTATTTCTTAGCGCCAGCAG AAAACCGGTAATGATACCAA
Product: lipopolysaccharide 1,2-N-acetylglucosaminetransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MIKKIIFTVTPIFSIPPRGAAAVETWIYQVAKRLSIPNAIACIKNAGYPEYNKINDNCDIHYIGFSKVYKRLFQKWARLD PLPYSQRILNIRDKVTTQEDSVIVIHNSMKLYRQIRERNPNAKLVMHMHNAFEPELPDTDAKIIVPSQFLKAFYEERLPA AAVSIVPNGFCAETYKRNPQDNLRQQLNIAEDATVLLYAGRISPDKGILLLLQAFKQLRTLRSNIKLVVVGDPYASRKGE KAEYQKKVLDAAKEIGTDCIMAGGQSPDQMHNFYHIADLVIVPSQVEEAFCMVAVEAMAAGKAVLASKKGGISEFVLDGI TGYHLAEPMSSDSIINDINRALADKERHQIAEKAKSLVFSKYSWENVAQRFEEQMKSWFDK
Sequences:
>Translated_381_residues MIKKIIFTVTPIFSIPPRGAAAVETWIYQVAKRLSIPNAIACIKNAGYPEYNKINDNCDIHYIGFSKVYKRLFQKWARLD PLPYSQRILNIRDKVTTQEDSVIVIHNSMKLYRQIRERNPNAKLVMHMHNAFEPELPDTDAKIIVPSQFLKAFYEERLPA AAVSIVPNGFCAETYKRNPQDNLRQQLNIAEDATVLLYAGRISPDKGILLLLQAFKQLRTLRSNIKLVVVGDPYASRKGE KAEYQKKVLDAAKEIGTDCIMAGGQSPDQMHNFYHIADLVIVPSQVEEAFCMVAVEAMAAGKAVLASKKGGISEFVLDGI TGYHLAEPMSSDSIINDINRALADKERHQIAEKAKSLVFSKYSWENVAQRFEEQMKSWFDK >Mature_381_residues MIKKIIFTVTPIFSIPPRGAAAVETWIYQVAKRLSIPNAIACIKNAGYPEYNKINDNCDIHYIGFSKVYKRLFQKWARLD PLPYSQRILNIRDKVTTQEDSVIVIHNSMKLYRQIRERNPNAKLVMHMHNAFEPELPDTDAKIIVPSQFLKAFYEERLPA AAVSIVPNGFCAETYKRNPQDNLRQQLNIAEDATVLLYAGRISPDKGILLLLQAFKQLRTLRSNIKLVVVGDPYASRKGE KAEYQKKVLDAAKEIGTDCIMAGGQSPDQMHNFYHIADLVIVPSQVEEAFCMVAVEAMAAGKAVLASKKGGISEFVLDGI TGYHLAEPMSSDSIINDINRALADKERHQIAEKAKSLVFSKYSWENVAQRFEEQMKSWFDK
Specific function: Adds the terminal N-acetyl-D-glucosamine group on the glucose(II) group of LPS [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.56 [H]
Molecular weight: Translated: 43082; Mature: 43082
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKIIFTVTPIFSIPPRGAAAVETWIYQVAKRLSIPNAIACIKNAGYPEYNKINDNCDI CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCE HYIGFSKVYKRLFQKWARLDPLPYSQRILNIRDKVTTQEDSVIVIHNSMKLYRQIRERNP EEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCC NAKLVMHMHNAFEPELPDTDAKIIVPSQFLKAFYEERLPAAAVSIVPNGFCAETYKRNPQ CCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHCCCCH DNLRQQLNIAEDATVLLYAGRISPDKGILLLLQAFKQLRTLRSNIKLVVVGDPYASRKGE HHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHCCCCC KAEYQKKVLDAAKEIGTDCIMAGGQSPDQMHNFYHIADLVIVPSQVEEAFCMVAVEAMAA HHHHHHHHHHHHHHHCCHHEECCCCCHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHC GKAVLASKKGGISEFVLDGITGYHLAEPMSSDSIINDINRALADKERHQIAEKAKSLVFS CHHHHHCCCCCHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYSWENVAQRFEEQMKSWFDK HCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIKKIIFTVTPIFSIPPRGAAAVETWIYQVAKRLSIPNAIACIKNAGYPEYNKINDNCDI CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCE HYIGFSKVYKRLFQKWARLDPLPYSQRILNIRDKVTTQEDSVIVIHNSMKLYRQIRERNP EEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCC NAKLVMHMHNAFEPELPDTDAKIIVPSQFLKAFYEERLPAAAVSIVPNGFCAETYKRNPQ CCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHCCCCH DNLRQQLNIAEDATVLLYAGRISPDKGILLLLQAFKQLRTLRSNIKLVVVGDPYASRKGE HHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHCCCCC KAEYQKKVLDAAKEIGTDCIMAGGQSPDQMHNFYHIADLVIVPSQVEEAFCMVAVEAMAA HHHHHHHHHHHHHHHCCHHEECCCCCHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHC GKAVLASKKGGISEFVLDGITGYHLAEPMSSDSIINDINRALADKERHQIAEKAKSLVFS CHHHHHCCCCCHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYSWENVAQRFEEQMKSWFDK HCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1657881; 11677609 [H]