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The map label for this gene is waaZ [H]

Identifier: 29144084

GI number: 29144084

Start: 3923021

End: 3923830

Strand: Direct

Name: waaZ [H]

Synonym: t3804

Alternate gene names: 29144084

Gene position: 3923021-3923830 (Clockwise)

Preceding gene: 29144083

Following gene: 29144085

Centisome position: 81.87

GC content: 37.78

Gene sequence:

>810_bases
ATGGGCAGCGTTAACTTCATAACTCACGCCGATGTTCTGCAACTTATTGCGAAAAGAACGGCTGAAGATTGTATTATTTT
TCTTTCTGGCCCTACGTCCAGAAAGACGCCGCTGTCCTTGTTACGAATGAAAGATGTCATTGCAGTCAATGGTTCTGTTC
AATATTTGCTAAACAATAACGTCAAGCCATTTTTGTACCTTCTGACGGATGTTCGCTTCCTCCATCGCCGGCGCGAAGAT
TTTTATAACTTTAGCCGTAACAGTCAGTTTACTATCGTCAATCTTGATGTGTACGAACAGGCTTCAGTGGATGATCAAAA
ATATATTGAAGAAAACTGTTTAATTATTCGCTCCTTTTATCGCCGAGAAAAAGGGGGCTTTTTAAAGAAAATTAAATTTA
ATATCCTCAAGCGGGTTCATAAAGCATTACTTATTTCAGTTCCTCTTTCGAAAAGAGGACGACTGGCTGGATTTTGTAAG
GATATCAGCATCGGGTATTGCTCTTACCATACTATTGCTTATACCGCTATTCAGGTTGCCTATTCCCTCAAGTATGGCCG
TATTATATGTTCTGGGCTTGACTTAACAGGGAGTTGCCCACGTTTCTATGACGAATCTACCAGCCCTATGCCATCTGAGC
TTAGTAAAGACCTGTTTAAAATACTGCCATTTTTTACTTTTATGAGAAAAAATGTGAGTGATTTAAATATCTTTAATTTA
TCAGATGATACTGCAATTCATTACGATATTATTCCATATATTACAGCCTCGGAACTTGAAGATGAAATATATTACGATAA
AATTGTCTAG

Upstream 100 bases:

>100_bases
GCTGCAGCGTTATGACATACTTGAGAGAATTTGAGATGTAATATTAGCTATTGAATATAACATTTATTTATAGGTTGCAT
GATAAACATACGAGTTTTTT

Downstream 100 bases:

>100_bases
ACACTAGATAAATCATTATTTTGCGTTGCTTCGGCACGCATTTCTTTTTCTATAATATATCTTTTCTATAAAGTTAACTA
TTCTGGATTATAGCTATTAT

Product: lipopolysaccharide core biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MGSVNFITHADVLQLIAKRTAEDCIIFLSGPTSRKTPLSLLRMKDVIAVNGSVQYLLNNNVKPFLYLLTDVRFLHRRRED
FYNFSRNSQFTIVNLDVYEQASVDDQKYIEENCLIIRSFYRREKGGFLKKIKFNILKRVHKALLISVPLSKRGRLAGFCK
DISIGYCSYHTIAYTAIQVAYSLKYGRIICSGLDLTGSCPRFYDESTSPMPSELSKDLFKILPFFTFMRKNVSDLNIFNL
SDDTAIHYDIIPYITASELEDEIYYDKIV

Sequences:

>Translated_269_residues
MGSVNFITHADVLQLIAKRTAEDCIIFLSGPTSRKTPLSLLRMKDVIAVNGSVQYLLNNNVKPFLYLLTDVRFLHRRRED
FYNFSRNSQFTIVNLDVYEQASVDDQKYIEENCLIIRSFYRREKGGFLKKIKFNILKRVHKALLISVPLSKRGRLAGFCK
DISIGYCSYHTIAYTAIQVAYSLKYGRIICSGLDLTGSCPRFYDESTSPMPSELSKDLFKILPFFTFMRKNVSDLNIFNL
SDDTAIHYDIIPYITASELEDEIYYDKIV
>Mature_268_residues
GSVNFITHADVLQLIAKRTAEDCIIFLSGPTSRKTPLSLLRMKDVIAVNGSVQYLLNNNVKPFLYLLTDVRFLHRRREDF
YNFSRNSQFTIVNLDVYEQASVDDQKYIEENCLIIRSFYRREKGGFLKKIKFNILKRVHKALLISVPLSKRGRLAGFCKD
ISIGYCSYHTIAYTAIQVAYSLKYGRIICSGLDLTGSCPRFYDESTSPMPSELSKDLFKILPFFTFMRKNVSDLNIFNLS
DDTAIHYDIIPYITASELEDEIYYDKIV

Specific function: Not Known. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790054, Length=262, Percent_Identity=70.2290076335878, Blast_Score=398, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009251 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31049; Mature: 30918

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSVNFITHADVLQLIAKRTAEDCIIFLSGPTSRKTPLSLLRMKDVIAVNGSVQYLLNNN
CCCCCEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHEEECCCEEEEECCC
VKPFLYLLTDVRFLHRRREDFYNFSRNSQFTIVNLDVYEQASVDDQKYIEENCLIIRSFY
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
RREKGGFLKKIKFNILKRVHKALLISVPLSKRGRLAGFCKDISIGYCSYHTIAYTAIQVA
HHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHH
YSLKYGRIICSGLDLTGSCPRFYDESTSPMPSELSKDLFKILPFFTFMRKNVSDLNIFNL
HHHHHCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
SDDTAIHYDIIPYITASELEDEIYYDKIV
CCCCEEEEEEECCEEHHHHHHHHHHHCCC
>Mature Secondary Structure 
GSVNFITHADVLQLIAKRTAEDCIIFLSGPTSRKTPLSLLRMKDVIAVNGSVQYLLNNN
CCCCEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHEEECCCEEEEECCC
VKPFLYLLTDVRFLHRRREDFYNFSRNSQFTIVNLDVYEQASVDDQKYIEENCLIIRSFY
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
RREKGGFLKKIKFNILKRVHKALLISVPLSKRGRLAGFCKDISIGYCSYHTIAYTAIQVA
HHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHH
YSLKYGRIICSGLDLTGSCPRFYDESTSPMPSELSKDLFKILPFFTFMRKNVSDLNIFNL
HHHHHCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
SDDTAIHYDIIPYITASELEDEIYYDKIV
CCCCEEEEEEECCEEHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1657881; 11677609 [H]