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The map label for this gene is rhaT [H]

Identifier: 29143871

GI number: 29143871

Start: 3669157

End: 3670191

Strand: Direct

Name: rhaT [H]

Synonym: t3569

Alternate gene names: 29143871

Gene position: 3669157-3670191 (Clockwise)

Preceding gene: 29143869

Following gene: 29143874

Centisome position: 76.57

GC content: 52.95

Gene sequence:

>1035_bases
ATGAGTAACGCGATTACGATGGGTATTTTCTGGCATCTGATAGGGGCGGCCAGTGCAGCCTGCTTCTATGCCCCGTTCAA
GCAAGTGAAACAGTGGTCATGGGAAACCATGTGGTCAGTGGGCGGCATCGTCTCATGGCTTATTCTGCCGTGGACAATTA
GCGCTCTGTTACTGCCTGATTTCTGGGCCTATTATGGGCAGTTTAACCTCTCCACCCTTTTACCGGTTTTTCTGTTCGGC
GCCATGTGGGGCATCGGCAATATTAACTACGGCCTGACCATGCGTTATCTCGGCATGTCGATGGGTATCGGCATCGCTAT
CGGCATTACGCTTATCGTCGGCACGCTGATGACGCCTATCATCAACGGTAACTTCGATGTATTAATCCATACCGAAGGGG
GACACATGACGCTACTTGGCGTTTTTGTCGCGCTGATCGGCGTCGGGATTGTGACGCGCGCCGGACAGTTAAAAGAACGC
AAAATGGGCATTAAAGCGGAGGAGTTCAATCTGAAGAAAGGGCTTCTGCTGGCAGTGATGTGCGGTATTTTCTCGGCGGG
GATGTCTTTTGCCATGAACGCCGCGAAACCGATGCATGAAGCTGCTGCCGCGCTTGGCGTTGACCCGCTCTATGTCGCGC
TGCCGAGTTACGTGGTGATTATGGGCGGCGGCGCGCTGGTGAACCTCGGTTTCTGTTTTATCCGCCTGGCAAAAGTGCAA
AATCTGTCGATAAAAGCCGACTTCTCGCTGGCAAGGCCATTGATTATCAGCAATATTCTGCTGTCCGCGCTTGGCGGTCT
GATGTGGTATTTGCAGTTCTTTTTCTATGCCTGGGGTCACGCGCGCATTCCCGCGCAATATGACTACATGAGCTGGATGC
TGCACATGAGCTTCTATGTGCTGTGCGGGGGGCTTGTCGGTCTGGTGCTAAAAGAGTGGAAAAATGCTGGCCGCCGTCCC
GTTGCCGTATTAAGCCTCGGCTGCGTGGTAATTATTATCGCGGCGAATATTGTCGGTTTAGGCATGGCCAGTTAA

Upstream 100 bases:

>100_bases
CAACGGCGGCAATCGTTATAAGGTTACCAGGCTGCGTAATTTTTAAACTCATGCAAACGGAAGGGGTATCCCGTCCATAA
AAAATAATGAGGAACATGTC

Downstream 100 bases:

>100_bases
TCGCTTTGATTACTGAGATGGCGCCATTGGCTCGGCGTCATCCCGGTTTCCCGCGTGAACACCACTGAAAAATAATTACT
ATCTTCAAAGCCACACTGCA

Product: rhamnose-proton symporter

Products: Proton [Cytoplasm]; L-rhamnose [Cytoplasm] [C]

Alternate protein names: L-rhamnose-H(+) transport protein [H]

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MSNAITMGIFWHLIGAASAACFYAPFKQVKQWSWETMWSVGGIVSWLILPWTISALLLPDFWAYYGQFNLSTLLPVFLFG
AMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPIINGNFDVLIHTEGGHMTLLGVFVALIGVGIVTRAGQLKER
KMGIKAEEFNLKKGLLLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYVVIMGGGALVNLGFCFIRLAKVQ
NLSIKADFSLARPLIISNILLSALGGLMWYLQFFFYAWGHARIPAQYDYMSWMLHMSFYVLCGGLVGLVLKEWKNAGRRP
VAVLSLGCVVIIIAANIVGLGMAS

Sequences:

>Translated_344_residues
MSNAITMGIFWHLIGAASAACFYAPFKQVKQWSWETMWSVGGIVSWLILPWTISALLLPDFWAYYGQFNLSTLLPVFLFG
AMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPIINGNFDVLIHTEGGHMTLLGVFVALIGVGIVTRAGQLKER
KMGIKAEEFNLKKGLLLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYVVIMGGGALVNLGFCFIRLAKVQ
NLSIKADFSLARPLIISNILLSALGGLMWYLQFFFYAWGHARIPAQYDYMSWMLHMSFYVLCGGLVGLVLKEWKNAGRRP
VAVLSLGCVVIIIAANIVGLGMAS
>Mature_343_residues
SNAITMGIFWHLIGAASAACFYAPFKQVKQWSWETMWSVGGIVSWLILPWTISALLLPDFWAYYGQFNLSTLLPVFLFGA
MWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPIINGNFDVLIHTEGGHMTLLGVFVALIGVGIVTRAGQLKERK
MGIKAEEFNLKKGLLLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYVVIMGGGALVNLGFCFIRLAKVQN
LSIKADFSLARPLIISNILLSALGGLMWYLQFFFYAWGHARIPAQYDYMSWMLHMSFYVLCGGLVGLVLKEWKNAGRRPV
AVLSLGCVVIIIAANIVGLGMAS

Specific function: Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the L-rhamnose transporter (TC 2.A.7.6) family [H]

Homologues:

Organism=Escherichia coli, GI1790341, Length=344, Percent_Identity=91.2790697674419, Blast_Score=638, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004673
- InterPro:   IPR010476 [H]

Pfam domain/function: PF06379 RhaT [H]

EC number: NA

Molecular weight: Translated: 37371; Mature: 37240

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNAITMGIFWHLIGAASAACFYAPFKQVKQWSWETMWSVGGIVSWLILPWTISALLLPD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWAYYGQFNLSTLLPVFLFGAMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPI
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
INGNFDVLIHTEGGHMTLLGVFVALIGVGIVTRAGQLKERKMGIKAEEFNLKKGLLLAVM
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHCCHHHHHHHHH
CGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYVVIMGGGALVNLGFCFIRLAKVQ
HHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHH
NLSIKADFSLARPLIISNILLSALGGLMWYLQFFFYAWGHARIPAQYDYMSWMLHMSFYV
CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LCGGLVGLVLKEWKNAGRRPVAVLSLGCVVIIIAANIVGLGMAS
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SNAITMGIFWHLIGAASAACFYAPFKQVKQWSWETMWSVGGIVSWLILPWTISALLLPD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWAYYGQFNLSTLLPVFLFGAMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPI
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
INGNFDVLIHTEGGHMTLLGVFVALIGVGIVTRAGQLKERKMGIKAEEFNLKKGLLLAVM
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHCCHHHHHHHHH
CGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYVVIMGGGALVNLGFCFIRLAKVQ
HHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHH
NLSIKADFSLARPLIISNILLSALGGLMWYLQFFFYAWGHARIPAQYDYMSWMLHMSFYV
CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LCGGLVGLVLKEWKNAGRRPVAVLSLGCVVIIIAANIVGLGMAS
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; L-rhamnose [Periplasm] [C]

Specific reaction: Proton [Periplasm] + L-rhamnose [Periplasm] = Proton [Cytoplasm] + L-rhamnose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA