Click here to switch to the map view.

The map label for this gene is tfaE [H]

Identifier: 29143755

GI number: 29143755

Start: 3525346

End: 3525939

Strand: Direct

Name: tfaE [H]

Synonym: t3434

Alternate gene names: 29143755

Gene position: 3525346-3525939 (Clockwise)

Preceding gene: 29143754

Following gene: 29143757

Centisome position: 73.57

GC content: 49.83

Gene sequence:

>594_bases
ATGAAACCTGTTTTTGATGAAAATGGGCTGGCTACAGTGCCGGGTGATATGCGTTGTTATTATTATGATGCAGTAACGTC
TGAATATACGGGCTGGTCTGATGAATATATTAATACTGGCGTAAGTATGCCCGCTTGTTCCACTGGTATTGACCCGGGCG
AATACATTCCGGGAAGAGTGGCAGTATTTACGGGTAAGGGATGGAGCCATGAAGAAGACCATCGCAATGAGACCGTTTAC
TCAACTGAAAATGGCGCAGCTGTTACAGTGGATTATATCGGTGCCATCAAAGACGGTTATGTCACGCTTTCACCGTTAAC
GCCATACGATAAATGGGATGGTGAGAAATGGGTGACGGATACCGAGGCACAGCATAGCGCCGCAGTAGAAGCTGCAGAAG
CACAGCGCCAGTCGCTGATTGATGCTGCAATGGCTTCCATCAGTCTGATTCAACTGAAATTACAGGCCGGGCGGAAGCTG
ACGCAGCCAGAAAACACCCGACTTAACGCTGTGCTGGATTATATTGACGCGGTAACGGCAACAGATACCAGCACAGCGCC
GGACGTCATCTGGCCTGAACTGCCGGAGGCGTAG

Upstream 100 bases:

>100_bases
AAACCGATGACCTTGGATTCGACGCCTCTCGTGTCGTGCCAACAGCTAATGAAAACCGTCCACGTAACATCGCCTTTAAT
TATATTGTGAGGGCTGCATA

Downstream 100 bases:

>100_bases
GCCATTCAATATCTGGCGCACCGGAAGTATCGACCAGTTCCAGTGCGTCCAGATAATCCAGCCACAAATTATATTGCGCC
AGTTCCTCACCTTTCAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MKPVFDENGLATVPGDMRCYYYDAVTSEYTGWSDEYINTGVSMPACSTGIDPGEYIPGRVAVFTGKGWSHEEDHRNETVY
STENGAAVTVDYIGAIKDGYVTLSPLTPYDKWDGEKWVTDTEAQHSAAVEAAEAQRQSLIDAAMASISLIQLKLQAGRKL
TQPENTRLNAVLDYIDAVTATDTSTAPDVIWPELPEA

Sequences:

>Translated_197_residues
MKPVFDENGLATVPGDMRCYYYDAVTSEYTGWSDEYINTGVSMPACSTGIDPGEYIPGRVAVFTGKGWSHEEDHRNETVY
STENGAAVTVDYIGAIKDGYVTLSPLTPYDKWDGEKWVTDTEAQHSAAVEAAEAQRQSLIDAAMASISLIQLKLQAGRKL
TQPENTRLNAVLDYIDAVTATDTSTAPDVIWPELPEA
>Mature_197_residues
MKPVFDENGLATVPGDMRCYYYDAVTSEYTGWSDEYINTGVSMPACSTGIDPGEYIPGRVAVFTGKGWSHEEDHRNETVY
STENGAAVTVDYIGAIKDGYVTLSPLTPYDKWDGEKWVTDTEAQHSAAVEAAEAQRQSLIDAAMASISLIQLKLQAGRKL
TQPENTRLNAVLDYIDAVTATDTSTAPDVIWPELPEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tfa family [H]

Homologues:

Organism=Escherichia coli, GI1787402, Length=200, Percent_Identity=64, Blast_Score=240, Evalue=4e-65,
Organism=Escherichia coli, GI1787637, Length=190, Percent_Identity=34.2105263157895, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI2367120, Length=190, Percent_Identity=34.2105263157895, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003458 [H]

Pfam domain/function: PF02413 Caudo_TAP [H]

EC number: NA

Molecular weight: Translated: 21507; Mature: 21507

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPVFDENGLATVPGDMRCYYYDAVTSEYTGWSDEYINTGVSMPACSTGIDPGEYIPGRV
CCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEE
AVFTGKGWSHEEDHRNETVYSTENGAAVTVDYIGAIKDGYVTLSPLTPYDKWDGEKWVTD
EEEECCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCC
TEAQHSAAVEAAEAQRQSLIDAAMASISLIQLKLQAGRKLTQPENTRLNAVLDYIDAVTA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHCCCCCCCCCCCHHHHHHHHHHHHHC
TDTSTAPDVIWPELPEA
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKPVFDENGLATVPGDMRCYYYDAVTSEYTGWSDEYINTGVSMPACSTGIDPGEYIPGRV
CCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEE
AVFTGKGWSHEEDHRNETVYSTENGAAVTVDYIGAIKDGYVTLSPLTPYDKWDGEKWVTD
EEEECCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCC
TEAQHSAAVEAAEAQRQSLIDAAMASISLIQLKLQAGRKLTQPENTRLNAVLDYIDAVTA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHCCCCCCCCCCCHHHHHHHHHHHHHC
TDTSTAPDVIWPELPEA
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3894006; 9278503 [H]