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The map label for this gene is stfE [H]

Identifier: 29143754

GI number: 29143754

Start: 3523832

End: 3525346

Strand: Direct

Name: stfE [H]

Synonym: t3433

Alternate gene names: 29143754

Gene position: 3523832-3525346 (Clockwise)

Preceding gene: 29143753

Following gene: 29143755

Centisome position: 73.54

GC content: 53.14

Gene sequence:

>1515_bases
ATGAGCACAAAATTTTATACCCTGCTGACGGATATTGGCGCGGCAAAACTTGCCAGCGCCGCCGCGCTCGGTGTGCCGCT
AAAAATTACCCATATGGCGGTGGGCGATGGCGGCGGAGTATTGCCAACGCCGGACGCAAAGCAGACGGCACTGGTAAATG
AGAAACGCCGGGCTGCGCTGAATATGCTTTATATCGACCCGCAGAACAGTAGCCAGATTATTGCTGAACAGGTGATCCCT
GAAAACGAGGGCGGTTGGTGGATACGTGAAGTGGGCCTGTTTGATGAGTCCGGGGCATTGATTGCCGTGGGAAACTGCCC
GGAAAGCTATAAGCCGCAACTGGCTGAAGGCAGCGGGCGTACCCAGACCGTGCGCATGGTGCTGATTACCAGCAGCACGG
ACAATATCACCCTGAAAATCGACCCTGCCGTAGTGCTGGCAACCCGCAAGTATGTGGATGATAAGGTACTGGAGCTGAAG
GTGTACGTGGATGACCTGATGGCAAAACATCTTGCCGCACCGGACCCGCATTCACAGTATGCACAGAAAGAAAGTCCTAC
GTTTACCGGGACACCCAAAGCGCCAACGCCAGCGGCGGGGAATAACACCACGCAGGTTGCGACCACCGCGTTTGTTCAGG
CTGCACTGACGGCTATTATTAATGGTGCGCCAGCCACGCTGGACACGCTGAAAGAAATAGCCGTAGCCATTAACAATGAT
CCGAAATTCAGTACCACCATTAATAATGCGCTGGCACTGAAAGCGCCGCTGTTGAGTCCGGCACTCACCGGAACGCCAAC
AGCCCCCACGGCGGCGCAGTCGGTCAACAATACACAGATTGCCACTACGGCTTTTGTGAAATCGGCGATTGCGGCAATGG
TGGGTTCTGCACCTGCGGCACTGGATACACTGAACGAACTGGCGGCGGCGCTGGGGAATGACCCGAACTTTGCCACGACA
ATGCTTAATGCACTGGCAGGTAAACAACCGCTGGACAATACGCTGACTAATTTGAGTGGAAAGGATGTAGCGGGTCTTCT
CGCATACCTTGGTTTGGGAGAAGGTTCGGCATTACCCGTTGGTGTGCCTGTTCCGTGGCCTTCCGCCACTCCGCCAACAG
GCTGGCTGAAATGCAATGGTGCGGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGTTTACCCGACAAATAAATTG
CCTGATTTACGCGGTGAATTTATTCGTGGCTGGGATGACGGACGTGGAGTGGATGCCGGGCGACAATTATTATCTTCACA
GGGGGATGCAATAAGAAATATTGAGGGATTCGCAGATGGCGGGATCGGTATGTCTTTTGATGCAATCAGAGGGGCTTTTT
ATGATGCAGGAACACGATCTGCGAGAATGCCGAATAACACAACTGATATAGGCAAAACCGATGACCTTGGATTCGACGCC
TCTCGTGTCGTGCCAACAGCTAATGAAAACCGTCCACGTAACATCGCCTTTAATTATATTGTGAGGGCTGCATAA

Upstream 100 bases:

>100_bases
AAATCACGATCTATCCGTATATCAACGAAACGATTATTTCCGGTGGCACCGCGCATGAAGGCGGGGCGGTCCATGTTATT
GACACAATGAGAGTGAATCC

Downstream 100 bases:

>100_bases
TGAAACCTGTTTTTGATGAAAATGGGCTGGCTACAGTGCCGGGTGATATGCGTTGTTATTATTATGATGCAGTAACGTCT
GAATATACGGGCTGGTCTGA

Product: variable tail fiber protein

Products: NA

Alternate protein names: Side tail fiber protein homolog from lambdoid prophage e14 [H]

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MSTKFYTLLTDIGAAKLASAAALGVPLKITHMAVGDGGGVLPTPDAKQTALVNEKRRAALNMLYIDPQNSSQIIAEQVIP
ENEGGWWIREVGLFDESGALIAVGNCPESYKPQLAEGSGRTQTVRMVLITSSTDNITLKIDPAVVLATRKYVDDKVLELK
VYVDDLMAKHLAAPDPHSQYAQKESPTFTGTPKAPTPAAGNNTTQVATTAFVQAALTAIINGAPATLDTLKEIAVAINND
PKFSTTINNALALKAPLLSPALTGTPTAPTAAQSVNNTQIATTAFVKSAIAAMVGSAPAALDTLNELAAALGNDPNFATT
MLNALAGKQPLDNTLTNLSGKDVAGLLAYLGLGEGSALPVGVPVPWPSATPPTGWLKCNGAAFSAEEYPELAKVYPTNKL
PDLRGEFIRGWDDGRGVDAGRQLLSSQGDAIRNIEGFADGGIGMSFDAIRGAFYDAGTRSARMPNNTTDIGKTDDLGFDA
SRVVPTANENRPRNIAFNYIVRAA

Sequences:

>Translated_504_residues
MSTKFYTLLTDIGAAKLASAAALGVPLKITHMAVGDGGGVLPTPDAKQTALVNEKRRAALNMLYIDPQNSSQIIAEQVIP
ENEGGWWIREVGLFDESGALIAVGNCPESYKPQLAEGSGRTQTVRMVLITSSTDNITLKIDPAVVLATRKYVDDKVLELK
VYVDDLMAKHLAAPDPHSQYAQKESPTFTGTPKAPTPAAGNNTTQVATTAFVQAALTAIINGAPATLDTLKEIAVAINND
PKFSTTINNALALKAPLLSPALTGTPTAPTAAQSVNNTQIATTAFVKSAIAAMVGSAPAALDTLNELAAALGNDPNFATT
MLNALAGKQPLDNTLTNLSGKDVAGLLAYLGLGEGSALPVGVPVPWPSATPPTGWLKCNGAAFSAEEYPELAKVYPTNKL
PDLRGEFIRGWDDGRGVDAGRQLLSSQGDAIRNIEGFADGGIGMSFDAIRGAFYDAGTRSARMPNNTTDIGKTDDLGFDA
SRVVPTANENRPRNIAFNYIVRAA
>Mature_503_residues
STKFYTLLTDIGAAKLASAAALGVPLKITHMAVGDGGGVLPTPDAKQTALVNEKRRAALNMLYIDPQNSSQIIAEQVIPE
NEGGWWIREVGLFDESGALIAVGNCPESYKPQLAEGSGRTQTVRMVLITSSTDNITLKIDPAVVLATRKYVDDKVLELKV
YVDDLMAKHLAAPDPHSQYAQKESPTFTGTPKAPTPAAGNNTTQVATTAFVQAALTAIINGAPATLDTLKEIAVAINNDP
KFSTTINNALALKAPLLSPALTGTPTAPTAAQSVNNTQIATTAFVKSAIAAMVGSAPAALDTLNELAAALGNDPNFATTM
LNALAGKQPLDNTLTNLSGKDVAGLLAYLGLGEGSALPVGVPVPWPSATPPTGWLKCNGAAFSAEEYPELAKVYPTNKLP
DLRGEFIRGWDDGRGVDAGRQLLSSQGDAIRNIEGFADGGIGMSFDAIRGAFYDAGTRSARMPNNTTDIGKTDDLGFDAS
RVVPTANENRPRNIAFNYIVRAA

Specific function: Unknown

COG id: COG5301

COG function: function code R; Phage-related tail fibre protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tail fiber family [H]

Homologues:

Organism=Escherichia coli, GI87081892, Length=76, Percent_Identity=42.1052631578947, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1787829, Length=75, Percent_Identity=41.3333333333333, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011083 [H]

Pfam domain/function: PF07484 Collar [H]

EC number: NA

Molecular weight: Translated: 52743; Mature: 52612

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKFYTLLTDIGAAKLASAAALGVPLKITHMAVGDGGGVLPTPDAKQTALVNEKRRAAL
CCCEEEEHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHEE
NMLYIDPQNSSQIIAEQVIPENEGGWWIREVGLFDESGALIAVGNCPESYKPQLAEGSGR
EEEEECCCCCHHHHHHHHCCCCCCCEEEEEECEECCCCCEEEECCCCCCCCCCCCCCCCC
TQTVRMVLITSSTDNITLKIDPAVVLATRKYVDDKVLELKVYVDDLMAKHLAAPDPHSQY
CEEEEEEEEECCCCEEEEEECCEEEEEEHHHCCCEEEEEEHHHHHHHHHHHCCCCCHHHH
AQKESPTFTGTPKAPTPAAGNNTTQVATTAFVQAALTAIINGAPATLDTLKEIAVAINND
HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCC
PKFSTTINNALALKAPLLSPALTGTPTAPTAAQSVNNTQIATTAFVKSAIAAMVGSAPAA
CCEEEECCCEEEEECCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHH
LDTLNELAAALGNDPNFATTMLNALAGKQPLDNTLTNLSGKDVAGLLAYLGLGEGSALPV
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCCEE
GVPVPWPSATPPTGWLKCNGAAFSAEEYPELAKVYPTNKLPDLRGEFIRGWDDGRGVDAG
ECCCCCCCCCCCCCEEEECCCCCCHHHCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCHHH
RQLLSSQGDAIRNIEGFADGGIGMSFDAIRGAFYDAGTRSARMPNNTTDIGKTDDLGFDA
HHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH
SRVVPTANENRPRNIAFNYIVRAA
HHCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure 
STKFYTLLTDIGAAKLASAAALGVPLKITHMAVGDGGGVLPTPDAKQTALVNEKRRAAL
CCEEEEHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHEE
NMLYIDPQNSSQIIAEQVIPENEGGWWIREVGLFDESGALIAVGNCPESYKPQLAEGSGR
EEEEECCCCCHHHHHHHHCCCCCCCEEEEEECEECCCCCEEEECCCCCCCCCCCCCCCCC
TQTVRMVLITSSTDNITLKIDPAVVLATRKYVDDKVLELKVYVDDLMAKHLAAPDPHSQY
CEEEEEEEEECCCCEEEEEECCEEEEEEHHHCCCEEEEEEHHHHHHHHHHHCCCCCHHHH
AQKESPTFTGTPKAPTPAAGNNTTQVATTAFVQAALTAIINGAPATLDTLKEIAVAINND
HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCC
PKFSTTINNALALKAPLLSPALTGTPTAPTAAQSVNNTQIATTAFVKSAIAAMVGSAPAA
CCEEEECCCEEEEECCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHH
LDTLNELAAALGNDPNFATTMLNALAGKQPLDNTLTNLSGKDVAGLLAYLGLGEGSALPV
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCCEE
GVPVPWPSATPPTGWLKCNGAAFSAEEYPELAKVYPTNKLPDLRGEFIRGWDDGRGVDAG
ECCCCCCCCCCCCCEEEECCCCCCHHHCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCHHH
RQLLSSQGDAIRNIEGFADGGIGMSFDAIRGAFYDAGTRSARMPNNTTDIGKTDDLGFDA
HHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH
SRVVPTANENRPRNIAFNYIVRAA
HHCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3894006; 8905232; 9278503 [H]