| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is rhlB [H]
Identifier: 29143704
GI number: 29143704
Start: 3482595
End: 3483860
Strand: Direct
Name: rhlB [H]
Synonym: t3382
Alternate gene names: 29143704
Gene position: 3482595-3483860 (Clockwise)
Preceding gene: 29143688
Following gene: 29143705
Centisome position: 72.68
GC content: 54.66
Gene sequence:
>1266_bases ATGAGCAAAACACATTTAACAGAACAGAAGTTTTCCGACTTCGCCCTGCACCCACAGGTGGTTGAAGCCCTTGAAAAAAA AGGGTTTTATAATTGTACGCCCATTCAGGCACTGGCCCTTCCGCTAACGCTGGCGGGTCGTGACGTTGCAGGGCAGGCGC AAACCGGTACCGGGAAAACGATGGCGTTTCTGACGTCAACGTTTCATTATTTACTTTCTCATCCCGCGATCGACGATCGC AAGGTGAACCAGCCGCGCGCGCTGATCATGGCGCCGACGCGTGAATTAGCCGTACAAATTCACGCAGACGCGGAGCCGCT GGCGCAAGCGACAGGCTTAAAATTAGGCCTGGCTTACGGCGGCGATGGTTACGACAAGCAGCTTAAAGTGCTGGAAAGCG GCGTTGATATTCTTATTGGTACGACGGGCCGATTGATCGACTACGCCAAACAAAACCACATTAACCTCGGCGCCATTCAG GTCGTCGTACTCGATGAAGCCGATCGCATGTACGATTTGGGCTTTATTAAAGATATCCGCTGGCTGTTCCGTCGTATGCC GCCGGCTGCGCAGCGTCTGAACATGTTGTTCTCCGCCACCCTGTCTTATCGGGTTCGCGAGCTGGCGTTTGAACAGATGA ACAACGCCGAATATGTTGAAGTGGAACCGGAGCAAAAGACCGGCCACCGCATTAAAGAAGAGCTTTTCTACCCCTCTAAT GAAGAGAAAATGCGTTTACTGCAAACGCTGATCGAAGAAGAGTGGCCGGATCGCGCCATTATTTTCGCCAACACCAAGCA TCGTTGCGAAGATATCTGGGGACATCTGGCGGCAGATGGCCATCGTGTTGGTCTGCTGACCGGCGACGTCGCGCAGAAAA AGCGCCTGCGGATTCTGGATGAGTTCACCCGCGGCGATCTGGATATTCTTGTGGCGACCGATGTCGCGGCGCGCGGGTTG CATATCCCCGCCGTAACGCACGTCTTTAACTACGATCTGCCAGACGATTGTGAAGACTATGTTCACCGTATCGGTCGTAC CGGTCGCGCTGGCGCCAGCGGACATTCCATCAGCCTGGCTTGTGAAGAGTATGCGCTGAATCTGCCCGCTATTGAGAGCT ATATCGGCCACTCGATTCCGGTCAGCAAATACAATCCGGAAGCGCTCATGAACGATCTGCCCAAGCCGTTGCGTCTGACG CGTTCGCGTCCTGGCAATGGTCCGCGCCGCGCTGGCGCTCCGCGTAATCGTCGTCGTTCAGGTTAA
Upstream 100 bases:
>100_bases AACCAACGAGGTGCTGATGTTAACTTCGCCAACAAAGGTTGACTTTATTTCACCGGATACGCTTTCGTAAAGCAATAGTA AGCTGATATTCTACCACACT
Downstream 100 bases:
>100_bases GAAAAGTTATGCCATACACAAAATCATTTAGCCTGTATCAAGGCGGCAAGAAAACAAATCCCGATGAGCTTAGGAAGAGT ACGCAGCCAACACGGATACA
Product: ATP-dependent RNA helicase RhlB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MSKTHLTEQKFSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIDDR KVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQ VVVLDEADRMYDLGFIKDIRWLFRRMPPAAQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGL HIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIESYIGHSIPVSKYNPEALMNDLPKPLRLT RSRPGNGPRRAGAPRNRRRSG
Sequences:
>Translated_421_residues MSKTHLTEQKFSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIDDR KVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQ VVVLDEADRMYDLGFIKDIRWLFRRMPPAAQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGL HIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIESYIGHSIPVSKYNPEALMNDLPKPLRLT RSRPGNGPRRAGAPRNRRRSG >Mature_420_residues SKTHLTEQKFSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIDDRK VNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQV VVLDEADRMYDLGFIKDIRWLFRRMPPAAQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNE EKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLH IPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIESYIGHSIPVSKYNPEALMNDLPKPLRLTR SRPGNGPRRAGAPRNRRRSG
Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI222352149, Length=351, Percent_Identity=38.7464387464387, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI148613856, Length=355, Percent_Identity=39.1549295774648, Blast_Score=225, Evalue=6e-59, Organism=Homo sapiens, GI38201710, Length=355, Percent_Identity=39.1549295774648, Blast_Score=225, Evalue=6e-59, Organism=Homo sapiens, GI41327771, Length=409, Percent_Identity=34.718826405868, Blast_Score=225, Evalue=8e-59, Organism=Homo sapiens, GI45446747, Length=358, Percent_Identity=34.9162011173184, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI45446743, Length=358, Percent_Identity=34.9162011173184, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI55749865, Length=356, Percent_Identity=35.3932584269663, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI21071032, Length=374, Percent_Identity=34.7593582887701, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI224593278, Length=357, Percent_Identity=36.6946778711485, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI4758138, Length=353, Percent_Identity=36.5439093484419, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=35.054347826087, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI262118318, Length=355, Percent_Identity=34.9295774647887, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=35.054347826087, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=35.054347826087, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI169881239, Length=369, Percent_Identity=34.6883468834688, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI13514809, Length=369, Percent_Identity=34.6883468834688, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI216548263, Length=355, Percent_Identity=34.9295774647887, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI262231852, Length=355, Percent_Identity=34.9295774647887, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI13518015, Length=355, Percent_Identity=34.9295774647887, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI7661920, Length=370, Percent_Identity=34.3243243243243, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI51094101, Length=377, Percent_Identity=32.8912466843501, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI164419743, Length=377, Percent_Identity=32.8912466843501, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI20149629, Length=373, Percent_Identity=33.5120643431635, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI41327773, Length=351, Percent_Identity=34.1880341880342, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI50659095, Length=378, Percent_Identity=33.3333333333333, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI13514831, Length=398, Percent_Identity=31.1557788944724, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI13129006, Length=374, Percent_Identity=32.8877005347594, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI164664518, Length=371, Percent_Identity=29.3800539083558, Blast_Score=175, Evalue=8e-44, Organism=Homo sapiens, GI8922886, Length=371, Percent_Identity=32.3450134770889, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI4758112, Length=357, Percent_Identity=31.6526610644258, Blast_Score=169, Evalue=3e-42, Organism=Homo sapiens, GI18375623, Length=357, Percent_Identity=31.6526610644258, Blast_Score=169, Evalue=3e-42, Organism=Homo sapiens, GI21040371, Length=358, Percent_Identity=31.8435754189944, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI41327779, Length=420, Percent_Identity=32.6190476190476, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI6005743, Length=371, Percent_Identity=32.0754716981132, Blast_Score=168, Evalue=9e-42, Organism=Homo sapiens, GI31542656, Length=380, Percent_Identity=33.1578947368421, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI38569503, Length=385, Percent_Identity=29.0909090909091, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI41327776, Length=374, Percent_Identity=31.283422459893, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI38569505, Length=381, Percent_Identity=29.3963254593176, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI188035877, Length=349, Percent_Identity=31.2320916905444, Blast_Score=162, Evalue=4e-40, Organism=Homo sapiens, GI256223453, Length=367, Percent_Identity=29.1553133514986, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI38327634, Length=350, Percent_Identity=30.8571428571429, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI62241022, Length=352, Percent_Identity=32.6704545454545, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI83700235, Length=371, Percent_Identity=32.8840970350404, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI17505907, Length=444, Percent_Identity=28.8288288288288, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI4503529, Length=371, Percent_Identity=33.1536388140162, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI62241024, Length=349, Percent_Identity=31.2320916905444, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI164419732, Length=368, Percent_Identity=31.25, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI256773275, Length=396, Percent_Identity=29.040404040404, Blast_Score=145, Evalue=7e-35, Organism=Homo sapiens, GI9966805, Length=315, Percent_Identity=32.3809523809524, Blast_Score=138, Evalue=8e-33, Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=31.6568047337278, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI9506931, Length=408, Percent_Identity=25, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI154759257, Length=413, Percent_Identity=27.1186440677966, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI20336298, Length=208, Percent_Identity=34.6153846153846, Blast_Score=112, Evalue=7e-25, Organism=Escherichia coli, GI1790214, Length=421, Percent_Identity=96.9121140142518, Blast_Score=847, Evalue=0.0, Organism=Escherichia coli, GI1787016, Length=381, Percent_Identity=38.5826771653543, Blast_Score=267, Evalue=1e-72, Organism=Escherichia coli, GI87082221, Length=374, Percent_Identity=37.9679144385027, Blast_Score=234, Evalue=1e-62, Organism=Escherichia coli, GI1788930, Length=366, Percent_Identity=38.2513661202186, Blast_Score=218, Evalue=7e-58, Organism=Escherichia coli, GI1787605, Length=351, Percent_Identity=36.4672364672365, Blast_Score=201, Evalue=5e-53, Organism=Caenorhabditis elegans, GI17510309, Length=363, Percent_Identity=38.2920110192837, Blast_Score=232, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=38.2920110192837, Blast_Score=232, Evalue=2e-61, Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=38.2920110192837, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI71995718, Length=363, Percent_Identity=38.2920110192837, Blast_Score=224, Evalue=8e-59, Organism=Caenorhabditis elegans, GI86570094, Length=359, Percent_Identity=35.3760445682451, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17552642, Length=390, Percent_Identity=34.8717948717949, Blast_Score=204, Evalue=7e-53, Organism=Caenorhabditis elegans, GI32565321, Length=400, Percent_Identity=32.5, Blast_Score=204, Evalue=9e-53, Organism=Caenorhabditis elegans, GI17555296, Length=375, Percent_Identity=34.1333333333333, Blast_Score=202, Evalue=2e-52, Organism=Caenorhabditis elegans, GI71995724, Length=370, Percent_Identity=33.7837837837838, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17507121, Length=370, Percent_Identity=33.7837837837838, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI115533224, Length=354, Percent_Identity=34.4632768361582, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI17510559, Length=383, Percent_Identity=31.5926892950392, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71987143, Length=369, Percent_Identity=33.8753387533875, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17507945, Length=361, Percent_Identity=34.6260387811634, Blast_Score=194, Evalue=6e-50, Organism=Caenorhabditis elegans, GI17537549, Length=356, Percent_Identity=34.5505617977528, Blast_Score=191, Evalue=7e-49, Organism=Caenorhabditis elegans, GI17507877, Length=386, Percent_Identity=33.9378238341969, Blast_Score=185, Evalue=3e-47, Organism=Caenorhabditis elegans, GI17509811, Length=407, Percent_Identity=31.4496314496315, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI71999646, Length=371, Percent_Identity=31.5363881401617, Blast_Score=181, Evalue=5e-46, Organism=Caenorhabditis elegans, GI71999644, Length=371, Percent_Identity=31.5363881401617, Blast_Score=181, Evalue=9e-46, Organism=Caenorhabditis elegans, GI17507879, Length=385, Percent_Identity=32.7272727272727, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17507881, Length=371, Percent_Identity=32.0754716981132, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI115532546, Length=411, Percent_Identity=29.683698296837, Blast_Score=172, Evalue=4e-43, Organism=Caenorhabditis elegans, GI115532548, Length=397, Percent_Identity=30.2267002518892, Blast_Score=172, Evalue=4e-43, Organism=Caenorhabditis elegans, GI193208216, Length=364, Percent_Identity=32.967032967033, Blast_Score=170, Evalue=1e-42, Organism=Caenorhabditis elegans, GI71982858, Length=357, Percent_Identity=31.9327731092437, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI71990816, Length=373, Percent_Identity=33.5120643431635, Blast_Score=164, Evalue=7e-41, Organism=Caenorhabditis elegans, GI17552114, Length=375, Percent_Identity=29.0666666666667, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17536099, Length=384, Percent_Identity=33.0729166666667, Blast_Score=158, Evalue=4e-39, Organism=Caenorhabditis elegans, GI17536101, Length=384, Percent_Identity=33.0729166666667, Blast_Score=158, Evalue=5e-39, Organism=Caenorhabditis elegans, GI17505370, Length=364, Percent_Identity=32.1428571428571, Blast_Score=158, Evalue=6e-39, Organism=Caenorhabditis elegans, GI17536103, Length=384, Percent_Identity=33.0729166666667, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI193206561, Length=396, Percent_Identity=29.040404040404, Blast_Score=152, Evalue=5e-37, Organism=Caenorhabditis elegans, GI17508543, Length=381, Percent_Identity=27.0341207349081, Blast_Score=149, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17507641, Length=436, Percent_Identity=28.6697247706422, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI32564046, Length=421, Percent_Identity=28.2660332541568, Blast_Score=138, Evalue=7e-33, Organism=Caenorhabditis elegans, GI17556951, Length=362, Percent_Identity=28.4530386740331, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI25148203, Length=412, Percent_Identity=23.3009708737864, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17553716, Length=355, Percent_Identity=27.3239436619718, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI71997889, Length=437, Percent_Identity=25.629290617849, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI25148291, Length=330, Percent_Identity=26.0606060606061, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71982862, Length=217, Percent_Identity=30.8755760368664, Blast_Score=99, Evalue=4e-21, Organism=Caenorhabditis elegans, GI71987152, Length=92, Percent_Identity=45.6521739130435, Blast_Score=84, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6324217, Length=364, Percent_Identity=37.9120879120879, Blast_Score=230, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6325138, Length=359, Percent_Identity=37.6044568245125, Blast_Score=226, Evalue=4e-60, Organism=Saccharomyces cerevisiae, GI6324778, Length=365, Percent_Identity=36.986301369863, Blast_Score=225, Evalue=9e-60, Organism=Saccharomyces cerevisiae, GI6321360, Length=343, Percent_Identity=38.4839650145773, Blast_Score=212, Evalue=8e-56, Organism=Saccharomyces cerevisiae, GI6323021, Length=364, Percent_Identity=33.5164835164835, Blast_Score=211, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6321856, Length=375, Percent_Identity=35.7333333333333, Blast_Score=196, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6320041, Length=369, Percent_Identity=32.520325203252, Blast_Score=196, Evalue=6e-51, Organism=Saccharomyces cerevisiae, GI6320173, Length=435, Percent_Identity=31.0344827586207, Blast_Score=188, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6323947, Length=355, Percent_Identity=33.8028169014084, Blast_Score=187, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6324620, Length=378, Percent_Identity=32.8042328042328, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6320224, Length=389, Percent_Identity=31.6195372750643, Blast_Score=174, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6322427, Length=358, Percent_Identity=32.4022346368715, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6322912, Length=337, Percent_Identity=33.8278931750742, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6322323, Length=337, Percent_Identity=33.8278931750742, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6319714, Length=360, Percent_Identity=31.9444444444444, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6320449, Length=357, Percent_Identity=31.6526610644258, Blast_Score=166, Evalue=9e-42, Organism=Saccharomyces cerevisiae, GI6321963, Length=386, Percent_Identity=29.7927461139896, Blast_Score=152, Evalue=8e-38, Organism=Saccharomyces cerevisiae, GI6321267, Length=413, Percent_Identity=31.4769975786925, Blast_Score=152, Evalue=8e-38, Organism=Saccharomyces cerevisiae, GI6320119, Length=356, Percent_Identity=29.4943820224719, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6321111, Length=367, Percent_Identity=29.700272479564, Blast_Score=148, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6320400, Length=375, Percent_Identity=31.7333333333333, Blast_Score=145, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6319618, Length=408, Percent_Identity=27.6960784313726, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6323306, Length=422, Percent_Identity=25.1184834123223, Blast_Score=122, Evalue=7e-29, Organism=Saccharomyces cerevisiae, GI6322876, Length=430, Percent_Identity=27.6744186046512, Blast_Score=114, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6324366, Length=422, Percent_Identity=26.7772511848341, Blast_Score=109, Evalue=1e-24, Organism=Drosophila melanogaster, GI28574962, Length=361, Percent_Identity=38.781163434903, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24584399, Length=376, Percent_Identity=34.3085106382979, Blast_Score=222, Evalue=3e-58, Organism=Drosophila melanogaster, GI24662330, Length=355, Percent_Identity=36.056338028169, Blast_Score=221, Evalue=6e-58, Organism=Drosophila melanogaster, GI17985987, Length=348, Percent_Identity=38.5057471264368, Blast_Score=218, Evalue=4e-57, Organism=Drosophila melanogaster, GI21356161, Length=357, Percent_Identity=37.2549019607843, Blast_Score=218, Evalue=7e-57, Organism=Drosophila melanogaster, GI24644487, Length=371, Percent_Identity=35.0404312668464, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI45551833, Length=371, Percent_Identity=35.0404312668464, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI24644485, Length=371, Percent_Identity=35.0404312668464, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI24644483, Length=371, Percent_Identity=35.0404312668464, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI24644479, Length=371, Percent_Identity=35.0404312668464, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI281361218, Length=371, Percent_Identity=35.0404312668464, Blast_Score=215, Evalue=6e-56, Organism=Drosophila melanogaster, GI24644481, Length=371, Percent_Identity=35.0404312668464, Blast_Score=215, Evalue=6e-56, Organism=Drosophila melanogaster, GI21355075, Length=363, Percent_Identity=38.0165289256198, Blast_Score=211, Evalue=7e-55, Organism=Drosophila melanogaster, GI18857967, Length=363, Percent_Identity=35.2617079889807, Blast_Score=208, Evalue=7e-54, Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=35.1123595505618, Blast_Score=206, Evalue=4e-53, Organism=Drosophila melanogaster, GI24584994, Length=406, Percent_Identity=33.743842364532, Blast_Score=205, Evalue=5e-53, Organism=Drosophila melanogaster, GI24642151, Length=349, Percent_Identity=34.3839541547278, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24585582, Length=388, Percent_Identity=34.020618556701, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI24645031, Length=370, Percent_Identity=33.5135135135135, Blast_Score=191, Evalue=7e-49, Organism=Drosophila melanogaster, GI28575014, Length=353, Percent_Identity=31.4447592067989, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI281365720, Length=317, Percent_Identity=37.2239747634069, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI24583281, Length=381, Percent_Identity=29.3963254593176, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI24583279, Length=382, Percent_Identity=29.3193717277487, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI24582080, Length=345, Percent_Identity=31.5942028985507, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI24582078, Length=345, Percent_Identity=31.5942028985507, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI17136248, Length=345, Percent_Identity=31.5942028985507, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI24582075, Length=345, Percent_Identity=31.5942028985507, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI24666101, Length=412, Percent_Identity=29.126213592233, Blast_Score=164, Evalue=7e-41, Organism=Drosophila melanogaster, GI24642822, Length=410, Percent_Identity=29.5121951219512, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI24581954, Length=358, Percent_Identity=32.122905027933, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI24581952, Length=358, Percent_Identity=32.122905027933, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI24581956, Length=358, Percent_Identity=32.122905027933, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI28571808, Length=360, Percent_Identity=31.6666666666667, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI28571809, Length=360, Percent_Identity=31.6666666666667, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI17136814, Length=362, Percent_Identity=32.8729281767956, Blast_Score=161, Evalue=7e-40, Organism=Drosophila melanogaster, GI19920478, Length=347, Percent_Identity=31.1239193083574, Blast_Score=155, Evalue=5e-38, Organism=Drosophila melanogaster, GI17647335, Length=359, Percent_Identity=31.1977715877437, Blast_Score=151, Evalue=7e-37, Organism=Drosophila melanogaster, GI20130173, Length=426, Percent_Identity=28.8732394366197, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24643725, Length=394, Percent_Identity=27.1573604060914, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI21355559, Length=395, Percent_Identity=29.873417721519, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI24668515, Length=328, Percent_Identity=31.0975609756098, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI18859659, Length=242, Percent_Identity=32.2314049586777, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI28571338, Length=242, Percent_Identity=32.2314049586777, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI24640164, Length=348, Percent_Identity=24.7126436781609, Blast_Score=105, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 47093; Mature: 46962
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTHLTEQKFSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKT CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCH MAFLTSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHEEEEEECCCHHHHHHCCCEEEEEEC GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR CCCHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHH WLFRRMPPAAQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCC EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD HHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA HHCCCCEEEEEECCHHHCCCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEE CEEYALNLPAIESYIGHSIPVSKYNPEALMNDLPKPLRLTRSRPGNGPRRAGAPRNRRRS EHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCC G C >Mature Secondary Structure SKTHLTEQKFSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKT CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCH MAFLTSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHEEEEEECCCHHHHHHCCCEEEEEEC GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR CCCHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHH WLFRRMPPAAQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCC EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD HHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA HHCCCCEEEEEECCHHHCCCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEE CEEYALNLPAIESYIGHSIPVSKYNPEALMNDLPKPLRLTRSRPGNGPRRAGAPRNRRRS EHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA