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The map label for this gene is yhdH [H]

Identifier: 29143624

GI number: 29143624

Start: 3386107

End: 3387081

Strand: Direct

Name: yhdH [H]

Synonym: t3291

Alternate gene names: 29143624

Gene position: 3386107-3387081 (Clockwise)

Preceding gene: 29143615

Following gene: 29143625

Centisome position: 70.66

GC content: 57.33

Gene sequence:

>975_bases
ATGCAGGCGTTGATCTTAGAACAGCAGGACGGTAAAACCCTCGCATCCGTGCAACATCTCGAAGAGAGTCAACTGCCGGC
AGGTGATGTGACGGTGGATGTCCACTGGTCCAGCCTGAATTATAAAGATGCTCTGGCTATCACCGGAAAAGGGAAAATTA
TCCGTCATTTTCCGATGATTCCTGGTATTGATTTCGCCGGCACCGTTCACGCAAGCGAAGATCCTCGCTTTCATGCAGGC
CAGGAAGTACTACTGACTGGCTGGGGCGTGGGCGAAAACCACTGGGGCGGCCTGGCCGAACGCGCACGCGTTAAAGGCGA
CTGGCTGGTCGCGCTGCCTGCGGGACTGAGCAGCCGTAACGCCATGATCATCGGCACCGCCGGTTTTACCGCCATGCTGT
GCGTCATGGCGCTTGAAGATGCAGGTATTCGCCCGCAAGACGGTGAGGTTGTCGTCACCGGCGCCAGCGGCGGTGTGGGC
AGCACTGCCGTTGCATTACTGCATAAGCTGGGCTATCAGGTTGCAGCAGTATCAGGACGTGAAAGCACCCACGGCTATCT
TAAGAGCCTGGGAGCTAACCGTATTCTCAGCCGCGATGAGTTTGCTGAATCTCGCCCGTTGGAAAAACAGCTGTGGGCCG
GTGCAATTGATACCGTTGGCGATAAAGTGCTGGCGAAAGTCCTGGCACAGATGAACTATGGCGGTTGCGTGGCCGCCTGC
GGCCTGGCGGGCGGCTTCGCGCTGCCGACCACCGTTATGCCATTCATTCTGCGTAATGTGCGTTTGCAAGGGGTGGACTC
GGTGATGACCCCACCGGCACGTCGCGCAGAAGCCTGGGCGCGTTTGGTTAAGGATCTGCCGGAATCGTTCTATGCTCAGG
CCGCCACAGAGATTACGCTGGCGGATGCGCCGAAGTTCGCCGATGCCATCATCAATAATCAGGTTCAGGGCCGTACGCTG
GTGAAGATAAAATAA

Upstream 100 bases:

>100_bases
ATCTGGCAATTTATTGCGTTGCATCGGCATCACGTTTTAATTAGCGAGTATAGTCTTCGTAGCTATTTTTCCAATCTACC
ATGTAAAGTGAGGACAGGTT

Downstream 100 bases:

>100_bases
CGTCACGTATAAAAAAATTTACACTTAATTACCTATTTATTTTTACACATTGACACACTCCCTATTATATTCACTACACG
CCATGTTGTGGTGGGTAGAC

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASEDPRFHAG
QEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVG
STAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDKVLAKVLAQMNYGGCVAAC
GLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQAATEITLADAPKFADAIINNQVQGRTL
VKIK

Sequences:

>Translated_324_residues
MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASEDPRFHAG
QEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVG
STAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDKVLAKVLAQMNYGGCVAAC
GLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQAATEITLADAPKFADAIINNQVQGRTL
VKIK
>Mature_324_residues
MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASEDPRFHAG
QEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVG
STAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDKVLAKVLAQMNYGGCVAAC
GLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQAATEITLADAPKFADAIINNQVQGRTL
VKIK

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789651, Length=324, Percent_Identity=88.5802469135803, Blast_Score=600, Evalue=1e-173,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR014188 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 34388; Mature: 34388

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMI
CCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEECCCC
PGIDFAGTVHASEDPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRN
CCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCC
AMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGR
EEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECCC
ESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDKVLAKVLAQMNYGGCVAAC
CHHHHHHHHCCHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
GLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQAATEITL
HHCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEE
ADAPKFADAIINNQVQGRTLVKIK
CCCCHHHHHHHCCCCCCCEEEEEC
>Mature Secondary Structure
MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMI
CCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEECCCC
PGIDFAGTVHASEDPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRN
CCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCC
AMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGR
EEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECCC
ESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDKVLAKVLAQMNYGGCVAAC
CHHHHHHHHCCHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
GLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQAATEITL
HHCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEE
ADAPKFADAIINNQVQGRTLVKIK
CCCCHHHHHHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1370469; 9278503 [H]