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The map label for this gene is yfbS [C]

Identifier: 29143604

GI number: 29143604

Start: 3362888

End: 3364240

Strand: Reverse

Name: yfbS [C]

Synonym: t3271

Alternate gene names: 29143604

Gene position: 3364240-3362888 (Counterclockwise)

Preceding gene: 29143605

Following gene: 29143603

Centisome position: 70.21

GC content: 51.37

Gene sequence:

>1353_bases
TTGACTTATTTTTTGTATGGGAATAATTTCTCCTCGTCAATATTGGATACAATATCATATATCATTGATTGGATAATTAT
AAATATGGAACCCATTACCCTTACCCTATGTTTATTGGTGTTCGCTATCGTCATGTTTGTATGGGAAAAAGTGCCGCTGG
CCGTCACTTCCATGATTGTCTGCGTGGCCTTAGTTATCACCGGCGTTCTGAATATTAAACAGGCCTTTGCTGGCTTTATC
GACACTAACGTCATCCTCTTTGTCGCGATGTTTATCGTGGGCGGTGCGTTGTTTGAGACCGGTATGGCAAACAAAGTGGG
CGGCGTCATCACGCGCTTCGCGAAAACAGAAAAACAGCTGATCTTCACCATTATGGTGGTGGTGGGTTTGATGTCTGGCG
TCCTCTCTAACACCGGTACCGCTGCGGTTTTGATTCCGGTGGTGATCGGCGTGGCGGCAAAATCGGGCTTCTCGCGTTCT
CGTCTACTGATGCCGCTGGTTTTCGCCGCTGCGTTGGGCGGTAACCTGTCGTTAATTGGCGCGCCGGGAAATCTTATCGC
GCAGTCTGCGCTACAGAATATTGGCGGCGGCTTTGGCTTTTTTGAATACGCAAAAATCGGTCTCCCGATGCTCATCTGCG
GCATTCTCTACTTCCTGACTATTGGCTATCGCTTTCTGCCGAATAATGCGACCGGCGGTGAGGTGGGGAGCGTCGGGGAG
CAACGTGACTACAGCCATGTTCCACAGTGGAAACAACGGCTCTCACTCGTGGTGTTGATCGCAACGATCCTCGGCATGAT
CTTTGAGAAGAAGATCGGTGTCAGCCTGGCCGTGACCGGTTGTATTGGCGCTCTTGTGCTGGTCGTAAGCGGCGTACTCA
CGGAAAAACAGGCCTATAAAGCCATTGATTCACAGACTATTTTTATCTTTGGCGGCACCCTGGCGCTGGCAAAAGCGCTG
GAAATGACCGGGGCAGGCAAGCTGGTTGCGGACTATGTAATCGGCATGCTGGGGCAAAACTCCTCACCGTTCATGTTGCT
GATCGCCGTTTTCGCCTTATCCGTTGTGATGACCAACTTTATGTCCAATACCGCAACGACAGCGCTATTGGTGCCGGTGA
GTTTGTCCATTGCCGCAGGTATGGGGGCCGACCCGCGTGCGGTTCTGATGGCGACGGTCATTGGCGGTTCCTGCGCCTAC
GCAACTCCTATCGGTATGCCTGCCAACATGATGGTGCTCTCCGCGGGTGGCTATAAATTTGTCGACTACGCTAAGGCCGG
TATCCCCCTGATTATCGTTTCAACCATTGTCAGCTTGATCCTGCTGCCAATCCTTTTCCCTTTTCATCCGTAA

Upstream 100 bases:

>100_bases
GCGCTTCAACCAATTCTTCAATTCTATTAATCACGTCCAGTAACGATCCAACTACGATCTTGATGTAGATCCCACTCCTG
CATCTTTCCTGAGAAACGAT

Downstream 100 bases:

>100_bases
TTAACGGAAGCTGTTCTGACTAAGGAGCATTTATGAGCAAAAGTGAACAGATATCCCATATGACCGACGTTATGGCCAAG
TTTGTGGGATATACCGGCAA

Product: membrane transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MTYFLYGNNFSSSILDTISYIIDWIIINMEPITLTLCLLVFAIVMFVWEKVPLAVTSMIVCVALVITGVLNIKQAFAGFI
DTNVILFVAMFIVGGALFETGMANKVGGVITRFAKTEKQLIFTIMVVVGLMSGVLSNTGTAAVLIPVVIGVAAKSGFSRS
RLLMPLVFAAALGGNLSLIGAPGNLIAQSALQNIGGGFGFFEYAKIGLPMLICGILYFLTIGYRFLPNNATGGEVGSVGE
QRDYSHVPQWKQRLSLVVLIATILGMIFEKKIGVSLAVTGCIGALVLVVSGVLTEKQAYKAIDSQTIFIFGGTLALAKAL
EMTGAGKLVADYVIGMLGQNSSPFMLLIAVFALSVVMTNFMSNTATTALLVPVSLSIAAGMGADPRAVLMATVIGGSCAY
ATPIGMPANMMVLSAGGYKFVDYAKAGIPLIIVSTIVSLILLPILFPFHP

Sequences:

>Translated_450_residues
MTYFLYGNNFSSSILDTISYIIDWIIINMEPITLTLCLLVFAIVMFVWEKVPLAVTSMIVCVALVITGVLNIKQAFAGFI
DTNVILFVAMFIVGGALFETGMANKVGGVITRFAKTEKQLIFTIMVVVGLMSGVLSNTGTAAVLIPVVIGVAAKSGFSRS
RLLMPLVFAAALGGNLSLIGAPGNLIAQSALQNIGGGFGFFEYAKIGLPMLICGILYFLTIGYRFLPNNATGGEVGSVGE
QRDYSHVPQWKQRLSLVVLIATILGMIFEKKIGVSLAVTGCIGALVLVVSGVLTEKQAYKAIDSQTIFIFGGTLALAKAL
EMTGAGKLVADYVIGMLGQNSSPFMLLIAVFALSVVMTNFMSNTATTALLVPVSLSIAAGMGADPRAVLMATVIGGSCAY
ATPIGMPANMMVLSAGGYKFVDYAKAGIPLIIVSTIVSLILLPILFPFHP
>Mature_449_residues
TYFLYGNNFSSSILDTISYIIDWIIINMEPITLTLCLLVFAIVMFVWEKVPLAVTSMIVCVALVITGVLNIKQAFAGFID
TNVILFVAMFIVGGALFETGMANKVGGVITRFAKTEKQLIFTIMVVVGLMSGVLSNTGTAAVLIPVVIGVAAKSGFSRSR
LLMPLVFAAALGGNLSLIGAPGNLIAQSALQNIGGGFGFFEYAKIGLPMLICGILYFLTIGYRFLPNNATGGEVGSVGEQ
RDYSHVPQWKQRLSLVVLIATILGMIFEKKIGVSLAVTGCIGALVLVVSGVLTEKQAYKAIDSQTIFIFGGTLALAKALE
MTGAGKLVADYVIGMLGQNSSPFMLLIAVFALSVVMTNFMSNTATTALLVPVSLSIAAGMGADPRAVLMATVIGGSCAYA
TPIGMPANMMVLSAGGYKFVDYAKAGIPLIIVSTIVSLILLPILFPFHP

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=203, Percent_Identity=36.9458128078818, Blast_Score=122, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI71988385, Length=452, Percent_Identity=23.4513274336283, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI32565804, Length=438, Percent_Identity=23.5159817351598, Blast_Score=92, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17551790, Length=479, Percent_Identity=20.2505219206681, Blast_Score=76, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6322263, Length=397, Percent_Identity=24.1813602015113, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898 [H]

Pfam domain/function: PF00939 Na_sulph_symp [H]

EC number: NA

Molecular weight: Translated: 47364; Mature: 47232

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYFLYGNNFSSSILDTISYIIDWIIINMEPITLTLCLLVFAIVMFVWEKVPLAVTSMIV
CEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
CVALVITGVLNIKQAFAGFIDTNVILFVAMFIVGGALFETGMANKVGGVITRFAKTEKQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
IFTIMVVVGLMSGVLSNTGTAAVLIPVVIGVAAKSGFSRSRLLMPLVFAAALGGNLSLIG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEE
APGNLIAQSALQNIGGGFGFFEYAKIGLPMLICGILYFLTIGYRFLPNNATGGEVGSVGE
CCHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCC
QRDYSHVPQWKQRLSLVVLIATILGMIFEKKIGVSLAVTGCIGALVLVVSGVLTEKQAYK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIDSQTIFIFGGTLALAKALEMTGAGKLVADYVIGMLGQNSSPFMLLIAVFALSVVMTNF
HHCCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
MSNTATTALLVPVSLSIAAGMGADPRAVLMATVIGGSCAYATPIGMPANMMVLSAGGYKF
HHHHHHHHEEEHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCH
VDYAKAGIPLIIVSTIVSLILLPILFPFHP
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TYFLYGNNFSSSILDTISYIIDWIIINMEPITLTLCLLVFAIVMFVWEKVPLAVTSMIV
EEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH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HHHHHCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]