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The map label for this gene is yhbQ [H]

Identifier: 29143527

GI number: 29143527

Start: 3281393

End: 3281710

Strand: Direct

Name: yhbQ [H]

Synonym: t3191

Alternate gene names: 29143527

Gene position: 3281393-3281710 (Clockwise)

Preceding gene: 29143525

Following gene: 29143530

Centisome position: 68.48

GC content: 55.35

Gene sequence:

>318_bases
ATGCTGATGGCGACAATGACACCCTGGTATCTGTATCTGATTCGTACTGCAGACAATGCGCTTTACACCGGAATAACCAC
CGATGTGGCGCGTCGTTACAGGCAGCATCAAACGGGAAAAGGCGCAAAAGCATTACGGGGAAAAGGCGAGTTAACGCTGG
CGTTTGCGGCGCAGGTCGGCGATCGCTCGCTGGCCCTGCGCATAGAGTATCGCATCAAACAGCTCACAAAGCGCCAGAAG
GAGCGCCTTGTGACGGAACGCGAAGCGTTTGAGGCGCTGCTGTCCAGCCTGCAAACGCCGGTGCTTAAAAACGATTGA

Upstream 100 bases:

>100_bases
TACGCACCAGGTCACCACGTGTTGTTTCGCCAGCCAACGGCCAATAGCGGTAAGTGTGTCCATCTTTATTCTCGCTTATA
CTGGGAACCTGAAAATTATC

Downstream 100 bases:

>100_bases
AGTGGTCGTGATACTCCACCAGCCCCGTCACGCCCTCCAGCGCATCCTCAGCCAAACGGTGTACCTGGAAAGCGCTTTCC
GTACCGGGCCAACGGCAGTG

Product: GIY-YIG nuclease superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MLMATMTPWYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGELTLAFAAQVGDRSLALRIEYRIKQLTKRQK
ERLVTEREAFEALLSSLQTPVLKND

Sequences:

>Translated_105_residues
MLMATMTPWYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGELTLAFAAQVGDRSLALRIEYRIKQLTKRQK
ERLVTEREAFEALLSSLQTPVLKND
>Mature_105_residues
MLMATMTPWYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGELTLAFAAQVGDRSLALRIEYRIKQLTKRQK
ERLVTEREAFEALLSSLQTPVLKND

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

Organism=Escherichia coli, GI1789545, Length=100, Percent_Identity=81, Blast_Score=168, Evalue=6e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022992
- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 12002; Mature: 12002

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMATMTPWYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGELTLAFAAQVG
CCCCCCCHHHHHEECCCCCCEECCHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEECCC
DRSLALRIEYRIKQLTKRQKERLVTEREAFEALLSSLQTPVLKND
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLMATMTPWYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGELTLAFAAQVG
CCCCCCCHHHHHEECCCCCCEECCHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEECCC
DRSLALRIEYRIKQLTKRQKERLVTEREAFEALLSSLQTPVLKND
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA