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The map label for this gene is yraN [H]

Identifier: 29143521

GI number: 29143521

Start: 3277989

End: 3278384

Strand: Direct

Name: yraN [H]

Synonym: t3185

Alternate gene names: 29143521

Gene position: 3277989-3278384 (Clockwise)

Preceding gene: 29143520

Following gene: 29143522

Centisome position: 68.41

GC content: 55.81

Gene sequence:

>396_bases
ATGGCTCAAATACCAGCAAGGGGAGATTGTTCCCGCCAGCTAACACGTAAACAGGCTGGCGACGCGTGGGAAGCTGCCGC
GCGTCTCTGGCTGGAAAGCAAAGGACTGCGGTTTATCGCCGCCAACGTGCGCGAGCGCGGCGGCGAAATCGATCTGATCA
TGCGCGACGGAAAAACGACGGTTTTTGTTGAGGTTCGCTATCGGCGCTCCGGGCTTTATGGCGGCGCGGCGGCTAGTGTG
ACCCGCAGCAAGCAACACAAATTATTACATACTGCCCGCTTGTGGCTCGCCCGCCAGAATGGGAGTTTTGATACTGTGGA
TTGTCGGTTCGATGTGTTAGCCTTCACCGGAAATGAGATTGAGTGGTTTCGGGATGCGTTTAACGACCACTCATAA

Upstream 100 bases:

>100_bases
ACCACTTTTCGCAGATGCGTCAGGTGCAGGGGTTTGAGATCAATGGTAATACCGGCGCATTAACCGCCAGCCCGGATTGT
GTGATTAACAGGAAGTTATC

Downstream 100 bases:

>100_bases
TTGAAGATTTTAAGGATTAGCGTGCTCGAAAGAATCAAAGTTTGCTTTACAGAAAGCATTCAAACTCAAATTGCTGCGGC
GGAAGCGCTTCCGGATGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MAQIPARGDCSRQLTRKQAGDAWEAAARLWLESKGLRFIAANVRERGGEIDLIMRDGKTTVFVEVRYRRSGLYGGAAASV
TRSKQHKLLHTARLWLARQNGSFDTVDCRFDVLAFTGNEIEWFRDAFNDHS

Sequences:

>Translated_131_residues
MAQIPARGDCSRQLTRKQAGDAWEAAARLWLESKGLRFIAANVRERGGEIDLIMRDGKTTVFVEVRYRRSGLYGGAAASV
TRSKQHKLLHTARLWLARQNGSFDTVDCRFDVLAFTGNEIEWFRDAFNDHS
>Mature_130_residues
AQIPARGDCSRQLTRKQAGDAWEAAARLWLESKGLRFIAANVRERGGEIDLIMRDGKTTVFVEVRYRRSGLYGGAAASVT
RSKQHKLLHTARLWLARQNGSFDTVDCRFDVLAFTGNEIEWFRDAFNDHS

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

Organism=Escherichia coli, GI1789538, Length=131, Percent_Identity=82.4427480916031, Blast_Score=228, Evalue=8e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 14860; Mature: 14729

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQIPARGDCSRQLTRKQAGDAWEAAARLWLESKGLRFIAANVRERGGEIDLIMRDGKTT
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECHHHCCCEEEEEEECCCEE
VFVEVRYRRSGLYGGAAASVTRSKQHKLLHTARLWLARQNGSFDTVDCRFDVLAFTGNEI
EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEEEEEECCCH
EWFRDAFNDHS
HHHHHHCCCCC
>Mature Secondary Structure 
AQIPARGDCSRQLTRKQAGDAWEAAARLWLESKGLRFIAANVRERGGEIDLIMRDGKTT
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECHHHCCCEEEEEEECCCEE
VFVEVRYRRSGLYGGAAASVTRSKQHKLLHTARLWLARQNGSFDTVDCRFDVLAFTGNEI
EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEEEEEECCCH
EWFRDAFNDHS
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA