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The map label for this gene is yraM [H]

Identifier: 29143520

GI number: 29143520

Start: 3275980

End: 3278031

Strand: Direct

Name: yraM [H]

Synonym: t3184

Alternate gene names: 29143520

Gene position: 3275980-3278031 (Clockwise)

Preceding gene: 29143518

Following gene: 29143521

Centisome position: 68.36

GC content: 58.43

Gene sequence:

>2052_bases
ATGGTACCCTCAACATTTTCTCGTTTGAACGCCGCGCGCGCGCTGCCTGTCGTCCTGGCTGCGCTACTTTTCGCCGGGTG
CGGCACCCAGGCGCCAGATCAAAGCGCAGCCTATATGCAGGGTTCAGCGCAAGCTGATTCCGCCTTTTACCTGCATCAGA
TGCAGCAAAGCGCAGATGATAGCAAGACCAACTGGCAATTACTCGCCATTCATGCACTGCTGAAAGAAGGAAAAAGCCAG
CAGGCCGTCGAGTTGTTCAATCAACCCCCGCAAAATCTGAACGATACCCAGCGTCGCGAACAATCTTTATTAGCGGTAGA
GATCAAACTGGCGCAGAAAGATGTGGCAGGCGCGCAGGCCTTGCTGGATAAACTAAAACCCGCCGACTTTGCGCCACATC
AGCAAGCGCGTTACTGGCAGGCGCAGATCGTTGCCAGCCAGGGACGCCCGTCGCTTACCCTGTTGCGGGCGTTAATCGCC
CAGGAACCGCTACTGGCGGCGAAAGAGAAACAAAAAAATATCGACGCCACCTGGCAGGCGCTCTCCGCCATGACGCCGGA
TCAGGCCAGGACGTTAGTTATCAACGCCGATGAAAATGTGCTTCAGGGCTGGCTGGATCTGCAACGCGTCTGGTTTGACA
ACCGCAACGATCCAGACATGCTGAAAGCCGGGATCGCCGACTGGCAAAAACGCTACCCGCAAAATCCGGGGGCGAAAATG
CTGCCGACGCAGCTCGTCAATGTACAACGTTTTAAACCAGCTTCCACCAGCAAAATCGCTCTGCTGCTGCCGCTGAACGG
TCAGGCTGCCGTGTTTGGCCGTACCATCCAGCAAGGTTTCGAAGCCGCGAAAAACCTCGGCACCCAGGCGGTGGAAATGC
AGCCTGTCGCCGCGCCTGACGCGCCGGTCGAACCAAGCGTGGAGGAGACGCAACCACAAATGACCAACGGCGTCGCCAGT
CCGTCGCAGGCCTCGGTGAGAGATCTGACTGATGACGCTCCATCCCAGTCTGCTACGCCAGTCAGCGCGCCACAAACTCC
CCCTGCGCAGCCTGCTACAGCAAGCGCGCCGGCGGATCCCTCCGCTGAATTAAAAATCTACGATACCTCTTCCCAGCCGT
TGGATCAGGTGCTCGCTCAGGTTCAGCAAGACGGCGCCAGTATCGTGGTCGGGCCGCTGTTGAAAAACAATGTGGAAGCG
CTGATGAAAAGCAACACGCCGCTCAACGTGCTGGCGCTCAACCAGCCGGAAACGGTACGTAGCTTCCCTAATATCTGCTA
TTTCGCGCTCTCTCCAGAAGATGAAGCCCGTGACGCGGCGCATCATATTTATGAGCAGGGCAAGCAGTCGCCGCTGCTGT
TGATCCCACGCAGCGCGCTTGGCGATCGCGTGGCGAATGCCTTCACCCAGGAGTGGCAAAAACTGGGCGGCGGCATCGTG
TTACAGCAAAAATTCGGCTCCGTAGCCGAGCTGAAAATGGGCGTGAACGGCGGCGCGGGTATCGCGTTGACGGGCAGTCC
GGTCGCCGCCAGCGTGCCTGCGCAGCCGGGCGTTACCATTGGCGGTCTGACCATCCCTGCGCCGCCGACCGACGCGCAAA
TCACCGGCGGCGGACGCGTAGACGCGGTCTATATTCTGGCTACGCCGGAAGAGATTGGCTTTATCAAACCGATGATCGCC
ATGCGTAACGGCACCCAGAGCGGCGCGACGCTGTATGCCAGCTCCCGCAGCGCGCAAGGCACCTCCGGCCCTGACTTCCG
TCTGGAGATGGAAGGTTTGCAATACAGTGAAATTCCCATGCTGGCAGGCGGCAATACGCCGTTGATGCAGCAGGCGCTGA
GTGCTGTACATAACGACTATTCTCTGGCGCGGATGTACGCCATGGGCGTGGATGCCTGGACGCTGGCGAACCACTTTTCG
CAGATGCGTCAGGTGCAGGGGTTTGAGATCAATGGTAATACCGGCGCATTAACCGCCAGCCCGGATTGTGTGATTAACAG
GAAGTTATCATGGCTCAAATACCAGCAAGGGGAGATTGTTCCCGCCAGCTAA

Upstream 100 bases:

>100_bases
GGCCCTGAGAATTATCCGCCGATTCGTTTTGTTTCATTGTGTCGTCCGTATTGCCGATTTAATATTGAGCATTGCGTAAA
AAAATATCACTGGATACAGT

Downstream 100 bases:

>100_bases
CACGTAAACAGGCTGGCGACGCGTGGGAAGCTGCCGCGCGTCTCTGGCTGGAAAGCAAAGGACTGCGGTTTATCGCCGCC
AACGTGCGCGAGCGCGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 683; Mature: 683

Protein sequence:

>683_residues
MVPSTFSRLNAARALPVVLAALLFAGCGTQAPDQSAAYMQGSAQADSAFYLHQMQQSADDSKTNWQLLAIHALLKEGKSQ
QAVELFNQPPQNLNDTQRREQSLLAVEIKLAQKDVAGAQALLDKLKPADFAPHQQARYWQAQIVASQGRPSLTLLRALIA
QEPLLAAKEKQKNIDATWQALSAMTPDQARTLVINADENVLQGWLDLQRVWFDNRNDPDMLKAGIADWQKRYPQNPGAKM
LPTQLVNVQRFKPASTSKIALLLPLNGQAAVFGRTIQQGFEAAKNLGTQAVEMQPVAAPDAPVEPSVEETQPQMTNGVAS
PSQASVRDLTDDAPSQSATPVSAPQTPPAQPATASAPADPSAELKIYDTSSQPLDQVLAQVQQDGASIVVGPLLKNNVEA
LMKSNTPLNVLALNQPETVRSFPNICYFALSPEDEARDAAHHIYEQGKQSPLLLIPRSALGDRVANAFTQEWQKLGGGIV
LQQKFGSVAELKMGVNGGAGIALTGSPVAASVPAQPGVTIGGLTIPAPPTDAQITGGGRVDAVYILATPEEIGFIKPMIA
MRNGTQSGATLYASSRSAQGTSGPDFRLEMEGLQYSEIPMLAGGNTPLMQQALSAVHNDYSLARMYAMGVDAWTLANHFS
QMRQVQGFEINGNTGALTASPDCVINRKLSWLKYQQGEIVPAS

Sequences:

>Translated_683_residues
MVPSTFSRLNAARALPVVLAALLFAGCGTQAPDQSAAYMQGSAQADSAFYLHQMQQSADDSKTNWQLLAIHALLKEGKSQ
QAVELFNQPPQNLNDTQRREQSLLAVEIKLAQKDVAGAQALLDKLKPADFAPHQQARYWQAQIVASQGRPSLTLLRALIA
QEPLLAAKEKQKNIDATWQALSAMTPDQARTLVINADENVLQGWLDLQRVWFDNRNDPDMLKAGIADWQKRYPQNPGAKM
LPTQLVNVQRFKPASTSKIALLLPLNGQAAVFGRTIQQGFEAAKNLGTQAVEMQPVAAPDAPVEPSVEETQPQMTNGVAS
PSQASVRDLTDDAPSQSATPVSAPQTPPAQPATASAPADPSAELKIYDTSSQPLDQVLAQVQQDGASIVVGPLLKNNVEA
LMKSNTPLNVLALNQPETVRSFPNICYFALSPEDEARDAAHHIYEQGKQSPLLLIPRSALGDRVANAFTQEWQKLGGGIV
LQQKFGSVAELKMGVNGGAGIALTGSPVAASVPAQPGVTIGGLTIPAPPTDAQITGGGRVDAVYILATPEEIGFIKPMIA
MRNGTQSGATLYASSRSAQGTSGPDFRLEMEGLQYSEIPMLAGGNTPLMQQALSAVHNDYSLARMYAMGVDAWTLANHFS
QMRQVQGFEINGNTGALTASPDCVINRKLSWLKYQQGEIVPAS
>Mature_683_residues
MVPSTFSRLNAARALPVVLAALLFAGCGTQAPDQSAAYMQGSAQADSAFYLHQMQQSADDSKTNWQLLAIHALLKEGKSQ
QAVELFNQPPQNLNDTQRREQSLLAVEIKLAQKDVAGAQALLDKLKPADFAPHQQARYWQAQIVASQGRPSLTLLRALIA
QEPLLAAKEKQKNIDATWQALSAMTPDQARTLVINADENVLQGWLDLQRVWFDNRNDPDMLKAGIADWQKRYPQNPGAKM
LPTQLVNVQRFKPASTSKIALLLPLNGQAAVFGRTIQQGFEAAKNLGTQAVEMQPVAAPDAPVEPSVEETQPQMTNGVAS
PSQASVRDLTDDAPSQSATPVSAPQTPPAQPATASAPADPSAELKIYDTSSQPLDQVLAQVQQDGASIVVGPLLKNNVEA
LMKSNTPLNVLALNQPETVRSFPNICYFALSPEDEARDAAHHIYEQGKQSPLLLIPRSALGDRVANAFTQEWQKLGGGIV
LQQKFGSVAELKMGVNGGAGIALTGSPVAASVPAQPGVTIGGLTIPAPPTDAQITGGGRVDAVYILATPEEIGFIKPMIA
MRNGTQSGATLYASSRSAQGTSGPDFRLEMEGLQYSEIPMLAGGNTPLMQQALSAVHNDYSLARMYAMGVDAWTLANHFS
QMRQVQGFEINGNTGALTASPDCVINRKLSWLKYQQGEIVPAS

Specific function: Unknown

COG id: COG3107

COG function: function code R; Putative lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1655 [H]

Homologues:

Organism=Escherichia coli, GI1789537, Length=684, Percent_Identity=78.5087719298246, Blast_Score=1078, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007443 [H]

Pfam domain/function: PF04348 LppC [H]

EC number: NA

Molecular weight: Translated: 73081; Mature: 73081

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPSTFSRLNAARALPVVLAALLFAGCGTQAPDQSAAYMQGSAQADSAFYLHQMQQSADD
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCC
SKTNWQLLAIHALLKEGKSQQAVELFNQPPQNLNDTQRREQSLLAVEIKLAQKDVAGAQA
CCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHCEEEEEEEEHHHHHHHHHH
LLDKLKPADFAPHQQARYWQAQIVASQGRPSLTLLRALIAQEPLLAAKEKQKNIDATWQA
HHHHCCCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHH
LSAMTPDQARTLVINADENVLQGWLDLQRVWFDNRNDPDMLKAGIADWQKRYPQNPGAKM
HHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
LPTQLVNVQRFKPASTSKIALLLPLNGQAAVFGRTIQQGFEAAKNLGTQAVEMQPVAAPD
CHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
APVEPSVEETQPQMTNGVASPSQASVRDLTDDAPSQSATPVSAPQTPPAQPATASAPADP
CCCCCCHHHCCCHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SAELKIYDTSSQPLDQVLAQVQQDGASIVVGPLLKNNVEALMKSNTPLNVLALNQPETVR
CCCEEEEECCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCCEEEEEECCCHHHH
SFPNICYFALSPEDEARDAAHHIYEQGKQSPLLLIPRSALGDRVANAFTQEWQKLGGGIV
CCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEE
LQQKFGSVAELKMGVNGGAGIALTGSPVAASVPAQPGVTIGGLTIPAPPTDAQITGGGRV
EEHHCCCEEEEEECCCCCCEEEEECCCCEECCCCCCCCEECCEECCCCCCCCEEECCCCE
DAVYILATPEEIGFIKPMIAMRNGTQSGATLYASSRSAQGTSGPDFRLEMEGLQYSEIPM
EEEEEEECCHHHCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCE
LAGGNTPLMQQALSAVHNDYSLARMYAMGVDAWTLANHFSQMRQVQGFEINGNTGALTAS
EECCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEECCCCCEEECC
PDCVINRKLSWLKYQQGEIVPAS
CCCEEECCHHHEEECCCCEECCC
>Mature Secondary Structure
MVPSTFSRLNAARALPVVLAALLFAGCGTQAPDQSAAYMQGSAQADSAFYLHQMQQSADD
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCC
SKTNWQLLAIHALLKEGKSQQAVELFNQPPQNLNDTQRREQSLLAVEIKLAQKDVAGAQA
CCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHCEEEEEEEEHHHHHHHHHH
LLDKLKPADFAPHQQARYWQAQIVASQGRPSLTLLRALIAQEPLLAAKEKQKNIDATWQA
HHHHCCCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHH
LSAMTPDQARTLVINADENVLQGWLDLQRVWFDNRNDPDMLKAGIADWQKRYPQNPGAKM
HHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
LPTQLVNVQRFKPASTSKIALLLPLNGQAAVFGRTIQQGFEAAKNLGTQAVEMQPVAAPD
CHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
APVEPSVEETQPQMTNGVASPSQASVRDLTDDAPSQSATPVSAPQTPPAQPATASAPADP
CCCCCCHHHCCCHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SAELKIYDTSSQPLDQVLAQVQQDGASIVVGPLLKNNVEALMKSNTPLNVLALNQPETVR
CCCEEEEECCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCCEEEEEECCCHHHH
SFPNICYFALSPEDEARDAAHHIYEQGKQSPLLLIPRSALGDRVANAFTQEWQKLGGGIV
CCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEE
LQQKFGSVAELKMGVNGGAGIALTGSPVAASVPAQPGVTIGGLTIPAPPTDAQITGGGRV
EEHHCCCEEEEEECCCCCCEEEEECCCCEECCCCCCCCEECCEECCCCCCCCEEECCCCE
DAVYILATPEEIGFIKPMIAMRNGTQSGATLYASSRSAQGTSGPDFRLEMEGLQYSEIPM
EEEEEEECCHHHCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCE
LAGGNTPLMQQALSAVHNDYSLARMYAMGVDAWTLANHFSQMRQVQGFEINGNTGALTAS
EECCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEECCCCCEEECC
PDCVINRKLSWLKYQQGEIVPAS
CCCEEECCHHHEEECCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]