Click here to switch to the map view.

The map label for this gene is yqjB [H]

Identifier: 29143486

GI number: 29143486

Start: 3238851

End: 3239234

Strand: Direct

Name: yqjB [H]

Synonym: t3147

Alternate gene names: 29143486

Gene position: 3238851-3239234 (Clockwise)

Preceding gene: 29143485

Following gene: 29143487

Centisome position: 67.59

GC content: 50.78

Gene sequence:

>384_bases
ATGCTTAAACCACGCATAACTGCCCGACAACTCATTTGGATCAGCGCTTTTCTGCTGATGCTGACCATACTCATGATGAC
GTGGTCAACGCTGCGTCAGCAAGAGTCGACGCTGGCCATTCGCGCGGTTAATCAGGGCGCCAGTATGCCAGACGGCTTCT
CAGTTCTGCATCATCTGGATGCGAACGGCATTCATTTTAAAAGCATTACGCCTAAAAATGACATGTTGCTCATTACCTTC
GATTCCCCTGCGCAAAGCGCCGCAGCAAAAACAGTGCTTGATCAAACGTTACCACACGGTTATGTCGTCGCTCAGCAGGA
CGATGACAACGAAACGGTACAGTGGTTGTCCCGCTTACGGGAAAGCTCACACCGCTTTGGCTAA

Upstream 100 bases:

>100_bases
GTCATGCCTGATGCTGCTGCCCGTGGTGCTGCTCTTTTTTGGCCTGGCGGGTTCACTGGTCATGCTGTGGAAAAAGAAGT
ATGGGAGCCGGGGATAACTT

Downstream 100 bases:

>100_bases
TCTCCAGGAATCCGAATCATATCACTCACTTTGGTGATTTCATTGTTTAATGACTATGATTAATAAAGCGGTGCTTAACC
CACCGCGTTATTATCGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MLKPRITARQLIWISAFLLMLTILMMTWSTLRQQESTLAIRAVNQGASMPDGFSVLHHLDANGIHFKSITPKNDMLLITF
DSPAQSAAAKTVLDQTLPHGYVVAQQDDDNETVQWLSRLRESSHRFG

Sequences:

>Translated_127_residues
MLKPRITARQLIWISAFLLMLTILMMTWSTLRQQESTLAIRAVNQGASMPDGFSVLHHLDANGIHFKSITPKNDMLLITF
DSPAQSAAAKTVLDQTLPHGYVVAQQDDDNETVQWLSRLRESSHRFG
>Mature_127_residues
MLKPRITARQLIWISAFLLMLTILMMTWSTLRQQESTLAIRAVNQGASMPDGFSVLHHLDANGIHFKSITPKNDMLLITF
DSPAQSAAAKTVLDQTLPHGYVVAQQDDDNETVQWLSRLRESSHRFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789482, Length=127, Percent_Identity=67.7165354330709, Blast_Score=176, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14305; Mature: 14305

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKPRITARQLIWISAFLLMLTILMMTWSTLRQQESTLAIRAVNQGASMPDGFSVLHHLD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHCC
ANGIHFKSITPKNDMLLITFDSPAQSAAAKTVLDQTLPHGYVVAQQDDDNETVQWLSRLR
CCCEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH
ESSHRFG
HHHCCCC
>Mature Secondary Structure
MLKPRITARQLIWISAFLLMLTILMMTWSTLRQQESTLAIRAVNQGASMPDGFSVLHHLD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHCC
ANGIHFKSITPKNDMLLITFDSPAQSAAAKTVLDQTLPHGYVVAQQDDDNETVQWLSRLR
CCCEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH
ESSHRFG
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]