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The map label for this gene is ygiF [H]

Identifier: 29143463

GI number: 29143463

Start: 3209997

End: 3211298

Strand: Reverse

Name: ygiF [H]

Synonym: t3122

Alternate gene names: 29143463

Gene position: 3211298-3209997 (Counterclockwise)

Preceding gene: 29143466

Following gene: 29143462

Centisome position: 67.01

GC content: 54.69

Gene sequence:

>1302_bases
ATGGCTCAGGAAATCGAATTAAAGTTTATCGTCAATCACGACGCCGTAGATGCGCTGCGAAATCATCTTCATACGCTCGG
CGGCGAGCATCATGCGCCCAGCCAGTTGCTGAATATCTATTTCGAAACGCCTGATAACTGGCTACGCCGCCATGATATGG
GGCTGCGTATTCGTGGTGAAAATGGGCGCTATGAAATGACCATGAAAATTGCCGGCCGGGTAACGGGCGGGCTGCACCAG
CGACCCGAATACAATGTTGCGCTAAGCGAACCCGTGCTGGATCTGACGCAACTTCCGGCGGAGGTCTGGCCGGATGGCAA
CCTGCCCGACGGCCTGGCATCAAGCGTACAGCCGCTGTTCAGTACCGATTTTTACCGGGAAAAATGGTGTCTGGACGTTG
ACGGCAGCAGGATTGAAATTGCGCTCGATCTCGGCGACGTAAAAGCGGGCGAGTTTGCCGAACCAATTTGTGAGCTGGAG
CTTGAGTTGCTTCGCGGCGATACGCGCGCCGTGTTAAAACTGGCGAAGCAACTGCTGTCGCAAACCGGTTTGCGTCAGGG
CAGTCTGAGTAAGGCGGCGCGAGGTTATCACCTGGCGCAGGGGAATGCGCCGCGAGAGAATACACCAACGGCAATTCTGC
GGACTGCCGCGAAAGCTACGGTAGAGCAAGGGCTGGAGGCCTCGCTGGATCTGGCGTTGTCACAGTGGCAGTACCATGAA
GAGCTCTGGCTGCGCGGCGACGAGTCGGCGAAAGAACATGTGCTGGATGCTATGGGATTAGTGCGCCATGCCTTAATGCT
TTTTGGTGGCATTGTTCCACGTAAAGCGAGCGCTCACTTACGTGATCTACTTACCCAGGCGGAAGCGACGATGACATCCG
CGGTGTCCGCCGTCACAGCCGTTTATAGTACGCAAACGGCGATGGCGAAACTGGCATTGACGGAATGGCTGGTGACGAAA
GCCTGGCAGCCATTTCTGGACGCGAAGGCGCAGGCCAAAATGGCCGATTCTTTTAAGCGTTTCGCCGACATTCATCTTTC
TCGTCATGCTGCTGAATTAAAAAAAGTTTTTGGACAACCGCTGGGTGATAAGTATCGCGACCAGTTGCCGCGTTTGACTC
GCGATATCGACAGCGTTTTACTGCTGGCCGGGTATTATGATGCGATGGTCGCGCAGGCATGGCTGGAAAACTGGCAGGGA
TTGCGTCACGCCATTATTACCGGGCAACGTATTGAAATTGAACATTTCCGTAATGAGGCCATCAACCAGCAGCCGTTCTG
GTTGCACAGCGGAAAACGATAA

Upstream 100 bases:

>100_bases
CATGGCAATTTGGCGCAAAATACTATCTACTGACAAAAATAATGCGGGTAAGTTCGCCAAGAATCTTCCCAGATGTGACA
TAACCCATAAGTACAAGGCC

Downstream 100 bases:

>100_bases
TCAGAACCGTAGAAAGCGCCTGATGACGCTGCGCTTATCAGGCTTACGGTATGCGGACTTGTAGGCCGGATCAGGCGAAA
CGCCGCCATCCGGCATTATT

Product: hypothetical protein

Products: NA

Alternate protein names: ORFXE [H]

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MAQEIELKFIVNHDAVDALRNHLHTLGGEHHAPSQLLNIYFETPDNWLRRHDMGLRIRGENGRYEMTMKIAGRVTGGLHQ
RPEYNVALSEPVLDLTQLPAEVWPDGNLPDGLASSVQPLFSTDFYREKWCLDVDGSRIEIALDLGDVKAGEFAEPICELE
LELLRGDTRAVLKLAKQLLSQTGLRQGSLSKAARGYHLAQGNAPRENTPTAILRTAAKATVEQGLEASLDLALSQWQYHE
ELWLRGDESAKEHVLDAMGLVRHALMLFGGIVPRKASAHLRDLLTQAEATMTSAVSAVTAVYSTQTAMAKLALTEWLVTK
AWQPFLDAKAQAKMADSFKRFADIHLSRHAAELKKVFGQPLGDKYRDQLPRLTRDIDSVLLLAGYYDAMVAQAWLENWQG
LRHAIITGQRIEIEHFRNEAINQQPFWLHSGKR

Sequences:

>Translated_433_residues
MAQEIELKFIVNHDAVDALRNHLHTLGGEHHAPSQLLNIYFETPDNWLRRHDMGLRIRGENGRYEMTMKIAGRVTGGLHQ
RPEYNVALSEPVLDLTQLPAEVWPDGNLPDGLASSVQPLFSTDFYREKWCLDVDGSRIEIALDLGDVKAGEFAEPICELE
LELLRGDTRAVLKLAKQLLSQTGLRQGSLSKAARGYHLAQGNAPRENTPTAILRTAAKATVEQGLEASLDLALSQWQYHE
ELWLRGDESAKEHVLDAMGLVRHALMLFGGIVPRKASAHLRDLLTQAEATMTSAVSAVTAVYSTQTAMAKLALTEWLVTK
AWQPFLDAKAQAKMADSFKRFADIHLSRHAAELKKVFGQPLGDKYRDQLPRLTRDIDSVLLLAGYYDAMVAQAWLENWQG
LRHAIITGQRIEIEHFRNEAINQQPFWLHSGKR
>Mature_432_residues
AQEIELKFIVNHDAVDALRNHLHTLGGEHHAPSQLLNIYFETPDNWLRRHDMGLRIRGENGRYEMTMKIAGRVTGGLHQR
PEYNVALSEPVLDLTQLPAEVWPDGNLPDGLASSVQPLFSTDFYREKWCLDVDGSRIEIALDLGDVKAGEFAEPICELEL
ELLRGDTRAVLKLAKQLLSQTGLRQGSLSKAARGYHLAQGNAPRENTPTAILRTAAKATVEQGLEASLDLALSQWQYHEE
LWLRGDESAKEHVLDAMGLVRHALMLFGGIVPRKASAHLRDLLTQAEATMTSAVSAVTAVYSTQTAMAKLALTEWLVTKA
WQPFLDAKAQAKMADSFKRFADIHLSRHAAELKKVFGQPLGDKYRDQLPRLTRDIDSVLLLAGYYDAMVAQAWLENWQGL
RHAIITGQRIEIEHFRNEAINQQPFWLHSGKR

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1598 [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=433, Percent_Identity=84.9884526558891, Blast_Score=746, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 48570; Mature: 48439

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQEIELKFIVNHDAVDALRNHLHTLGGEHHAPSQLLNIYFETPDNWLRRHDMGLRIRGE
CCCEEEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHEEEEECCHHHHHHCCCCEEEECC
NGRYEMTMKIAGRVTGGLHQRPEYNVALSEPVLDLTQLPAEVWPDGNLPDGLASSVQPLF
CCCEEEEEEEHHHHCCCCCCCCCCCEEECCCHHHHHHCCHHHCCCCCCCCHHHHHHHHHH
STDFYREKWCLDVDGSRIEIALDLGDVKAGEFAEPICELELELLRGDTRAVLKLAKQLLS
HHHHHHHCEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
QTGLRQGSLSKAARGYHLAQGNAPRENTPTAILRTAAKATVEQGLEASLDLALSQWQYHE
HCCCCCCCHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ELWLRGDESAKEHVLDAMGLVRHALMLFGGIVPRKASAHLRDLLTQAEATMTSAVSAVTA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VYSTQTAMAKLALTEWLVTKAWQPFLDAKAQAKMADSFKRFADIHLSRHAAELKKVFGQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LGDKYRDQLPRLTRDIDSVLLLAGYYDAMVAQAWLENWQGLRHAIITGQRIEIEHFRNEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHH
INQQPFWLHSGKR
CCCCCCEECCCCC
>Mature Secondary Structure 
AQEIELKFIVNHDAVDALRNHLHTLGGEHHAPSQLLNIYFETPDNWLRRHDMGLRIRGE
CCEEEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHEEEEECCHHHHHHCCCCEEEECC
NGRYEMTMKIAGRVTGGLHQRPEYNVALSEPVLDLTQLPAEVWPDGNLPDGLASSVQPLF
CCCEEEEEEEHHHHCCCCCCCCCCCEEECCCHHHHHHCCHHHCCCCCCCCHHHHHHHHHH
STDFYREKWCLDVDGSRIEIALDLGDVKAGEFAEPICELELELLRGDTRAVLKLAKQLLS
HHHHHHHCEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
QTGLRQGSLSKAARGYHLAQGNAPRENTPTAILRTAAKATVEQGLEASLDLALSQWQYHE
HCCCCCCCHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ELWLRGDESAKEHVLDAMGLVRHALMLFGGIVPRKASAHLRDLLTQAEATMTSAVSAVTA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VYSTQTAMAKLALTEWLVTKAWQPFLDAKAQAKMADSFKRFADIHLSRHAAELKKVFGQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LGDKYRDQLPRLTRDIDSVLLLAGYYDAMVAQAWLENWQGLRHAIITGQRIEIEHFRNEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHH
INQQPFWLHSGKR
CCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8412694; 9278503 [H]