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The map label for this gene is rfaE [H]

Identifier: 29143461

GI number: 29143461

Start: 3205555

End: 3206988

Strand: Reverse

Name: rfaE [H]

Synonym: t3120

Alternate gene names: 29143461

Gene position: 3206988-3205555 (Counterclockwise)

Preceding gene: 29143462

Following gene: 29143458

Centisome position: 66.92

GC content: 57.74

Gene sequence:

>1434_bases
ATGAAAGTAAATCTGCCAGCGTTTGAACGTGCAGGCGTCATGGTTGTGGGTGATGTAATGCTGGATCGCTATTGGTATGG
CCCCACTTGCCGTATTTCACCGGAAGCGCCGGTGCCCGTGGTTAAGGTAAATACCGTTGAGGAACGTCCGGGCGGCGCGG
CGAACGTGGCGATGAACATTGCGTCTCTGGGAGCGAACGCCCGTCTGGTCGGCCTGACGGGTATTGATGACGCCGCGCGC
GCGCTGAGCAAAACGCTGGCGGAGGTCAATGTGAAGTGCGACTTCGTTTCTGTGCCGACGCATCCGACGATTACCAAACT
GCGCGTACTATCACGTAATCAGCAGCTCATTCGTCTTGATTTTGAAGAAGGCTTTGAGGGCGTGGACCCGCAGCCGTTGC
ATGAGCGTATCAACCAGGCGCTGGGATCGATCGGCGCGCTGGTATTGTCCGATTATGCCAAAGGCGCTCTGACCAGCGTG
CAGACTATGATTTCCCTAGCGCGCCAGGCGGGCGTGCCGGTGCTCATCGATCCGAAAGGAACGGATTTTGAACGTTACCG
CGGCGCCACGCTGCTGACGCCAAACCTTTCTGAATTCGAGGCGGTTGCGGGGAAATGTAAAAGCGAAGACGAACTGGTTG
AACGCGGCATGAAGCTCATTGCCGATTACGACCTTTCCGCGCTGTTGGTCACGCGTTCCGAACAGGGAATGACGCTGCTG
CAACCGAATAAAGCGCCGCTACATATGCCGACGCAGGCGCAGGAAGTTTATGATGTTACCGGTGCGGGCGATACGGTGAT
CGGCGTGCTGGCGGCGACGCTGGCGGCGGGAAATACCCTGGAGGAGGCGTGTTATTTCGCCAATGCGGCGGCGGGCGTAG
TGGTAGGTAAACTCGGGACGTCAACGGTTTCCCCTATTGAGCTGGAAAACGCAGTGCGCGGACGCGCGGATACCGGCTTC
GGCGTCATGACCGAAGAGGAGTTGAGACAGGCCGTCGCCAGCGCGCGTAAGCGTGGCGAGAAAGTGGTCATGACCAACGG
CGTTTTCGATATTCTGCACGCGGGCCACGTCTCTTATCTGGCGAACGCGCGCAAACTGGGCGACCGCCTGATTGTTGCGG
TCAATAGTGACGCCTCGACTAAACGTCTGAAAGGCGAAAGCCGTCCGGTTAATCCGCTCGAACAGCGTATGATCGTGCTG
GGCGCGCTGGAGTCGGTCGACTGGGTTGTCTCTTTTGAAGAGGATACGCCGCAACGACTGATTGCCGGTATTCTGCCGGA
TCTGCTGGTAAAAGGCGGCGACTATAAGCCGGAAGAGATCGCGGGCAGCGAAGAGGTCTGGGCCAACGGCGGCGAAGTCA
TGGTGCTGAACTTCGAAGATGGTTGTTCCACGACCAATATCATCAAAAAGATCCAGACCGAGAGCGAGAAGTAA

Upstream 100 bases:

>100_bases
AAGAGCGCGCGCTGGTGCAGGCAAGCTGGCGGAAGTGGCTGGTAGCCGTTTGAATTATGCTATTATCGCGCGCAAATTTT
GAATCTCTCAGGAGACAGGA

Downstream 100 bases:

>100_bases
AACCGCGTCATCAGGCGTTACAGACGCTGCGGGCGCTGATTTTGAAGGTGCGTCGGACATTTTGTTTCGACGCGTATCTC
GCGGTTGACGCTGCTTTTTT

Product: bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase

Products: NA

Alternate protein names: D-beta-D-heptose 7-phosphate kinase; D-beta-D-heptose 7-phosphotransferase; D-beta-D-heptose 1-phosphate adenosyltransferase [H]

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MKVNLPAFERAGVMVVGDVMLDRYWYGPTCRISPEAPVPVVKVNTVEERPGGAANVAMNIASLGANARLVGLTGIDDAAR
ALSKTLAEVNVKCDFVSVPTHPTITKLRVLSRNQQLIRLDFEEGFEGVDPQPLHERINQALGSIGALVLSDYAKGALTSV
QTMISLARQAGVPVLIDPKGTDFERYRGATLLTPNLSEFEAVAGKCKSEDELVERGMKLIADYDLSALLVTRSEQGMTLL
QPNKAPLHMPTQAQEVYDVTGAGDTVIGVLAATLAAGNTLEEACYFANAAAGVVVGKLGTSTVSPIELENAVRGRADTGF
GVMTEEELRQAVASARKRGEKVVMTNGVFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGESRPVNPLEQRMIVL
GALESVDWVVSFEEDTPQRLIAGILPDLLVKGGDYKPEEIAGSEEVWANGGEVMVLNFEDGCSTTNIIKKIQTESEK

Sequences:

>Translated_477_residues
MKVNLPAFERAGVMVVGDVMLDRYWYGPTCRISPEAPVPVVKVNTVEERPGGAANVAMNIASLGANARLVGLTGIDDAAR
ALSKTLAEVNVKCDFVSVPTHPTITKLRVLSRNQQLIRLDFEEGFEGVDPQPLHERINQALGSIGALVLSDYAKGALTSV
QTMISLARQAGVPVLIDPKGTDFERYRGATLLTPNLSEFEAVAGKCKSEDELVERGMKLIADYDLSALLVTRSEQGMTLL
QPNKAPLHMPTQAQEVYDVTGAGDTVIGVLAATLAAGNTLEEACYFANAAAGVVVGKLGTSTVSPIELENAVRGRADTGF
GVMTEEELRQAVASARKRGEKVVMTNGVFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGESRPVNPLEQRMIVL
GALESVDWVVSFEEDTPQRLIAGILPDLLVKGGDYKPEEIAGSEEVWANGGEVMVLNFEDGCSTTNIIKKIQTESEK
>Mature_477_residues
MKVNLPAFERAGVMVVGDVMLDRYWYGPTCRISPEAPVPVVKVNTVEERPGGAANVAMNIASLGANARLVGLTGIDDAAR
ALSKTLAEVNVKCDFVSVPTHPTITKLRVLSRNQQLIRLDFEEGFEGVDPQPLHERINQALGSIGALVLSDYAKGALTSV
QTMISLARQAGVPVLIDPKGTDFERYRGATLLTPNLSEFEAVAGKCKSEDELVERGMKLIADYDLSALLVTRSEQGMTLL
QPNKAPLHMPTQAQEVYDVTGAGDTVIGVLAATLAAGNTLEEACYFANAAAGVVVGKLGTSTVSPIELENAVRGRADTGF
GVMTEEELRQAVASARKRGEKVVMTNGVFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGESRPVNPLEQRMIVL
GALESVDWVVSFEEDTPQRLIAGILPDLLVKGGDYKPEEIAGSEEVWANGGEVMVLNFEDGCSTTNIIKKIQTESEK

Specific function: Catalyzes the ADP transfer to D-glycero-D-manno-heptose 1-phosphate, yielding ADP-D,D-heptose [H]

COG id: COG2870

COG function: function code M; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the cytidylyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1789432, Length=476, Percent_Identity=93.4873949579832, Blast_Score=915, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023030
- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR004821
- InterPro:   IPR004820
- InterPro:   IPR011913
- InterPro:   IPR011914
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01467 CTP_transf_2; PF00294 PfkB [H]

EC number: 2.7.-.- [C]

Molecular weight: Translated: 51125; Mature: 51125

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00583 PFKB_KINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVNLPAFERAGVMVVGDVMLDRYWYGPTCRISPEAPVPVVKVNTVEERPGGAANVAMNI
CCCCCCCHHHCCEEEEEHHHHHHEECCCCEEECCCCCCCEEEEECCCCCCCCCHHHHHHH
ASLGANARLVGLTGIDDAARALSKTLAEVNVKCDFVSVPTHPTITKLRVLSRNQQLIRLD
HHCCCCEEEEEECCCCHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHCCCCEEEEEE
FEEGFEGVDPQPLHERINQALGSIGALVLSDYAKGALTSVQTMISLARQAGVPVLIDPKG
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC
TDFERYRGATLLTPNLSEFEAVAGKCKSEDELVERGMKLIADYDLSALLVTRSEQGMTLL
CCHHHHCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEE
QPNKAPLHMPTQAQEVYDVTGAGDTVIGVLAATLAAGNTLEEACYFANAAAGVVVGKLGT
CCCCCCCCCCCCHHHHEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCC
STVSPIELENAVRGRADTGFGVMTEEELRQAVASARKRGEKVVMTNGVFDILHAGHVSYL
CCCCCEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHH
ANARKLGDRLIVAVNSDASTKRLKGESRPVNPLEQRMIVLGALESVDWVVSFEEDTPQRL
HHHHHCCCEEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHH
IAGILPDLLVKGGDYKPEEIAGSEEVWANGGEVMVLNFEDGCSTTNIIKKIQTESEK
HHHHHHHHHHCCCCCCHHHHCCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKVNLPAFERAGVMVVGDVMLDRYWYGPTCRISPEAPVPVVKVNTVEERPGGAANVAMNI
CCCCCCCHHHCCEEEEEHHHHHHEECCCCEEECCCCCCCEEEEECCCCCCCCCHHHHHHH
ASLGANARLVGLTGIDDAARALSKTLAEVNVKCDFVSVPTHPTITKLRVLSRNQQLIRLD
HHCCCCEEEEEECCCCHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHCCCCEEEEEE
FEEGFEGVDPQPLHERINQALGSIGALVLSDYAKGALTSVQTMISLARQAGVPVLIDPKG
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC
TDFERYRGATLLTPNLSEFEAVAGKCKSEDELVERGMKLIADYDLSALLVTRSEQGMTLL
CCHHHHCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEE
QPNKAPLHMPTQAQEVYDVTGAGDTVIGVLAATLAAGNTLEEACYFANAAAGVVVGKLGT
CCCCCCCCCCCCHHHHEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCC
STVSPIELENAVRGRADTGFGVMTEEELRQAVASARKRGEKVVMTNGVFDILHAGHVSYL
CCCCCEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHH
ANARKLGDRLIVAVNSDASTKRLKGESRPVNPLEQRMIVLGALESVDWVVSFEEDTPQRL
HHHHHCCCEEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHH
IAGILPDLLVKGGDYKPEEIAGSEEVWANGGEVMVLNFEDGCSTTNIIKKIQTESEK
HHHHHHHHHHCCCCCCHHHHCCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA