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The map label for this gene is 29143397

Identifier: 29143397

GI number: 29143397

Start: 3133528

End: 3134451

Strand: Reverse

Name: 29143397

Synonym: t3053

Alternate gene names: NA

Gene position: 3134451-3133528 (Counterclockwise)

Preceding gene: 29143398

Following gene: 29143396

Centisome position: 65.41

GC content: 47.51

Gene sequence:

>924_bases
ATGGGATATTTAAAATTACCTGAGGGTAAAAGGATTGCGGTCAATCTTGGTGTCGATGTAGATGCTCAGTCTTTATGGCT
GGGCGGATTTAATCGACCGTCGCCATCCTTTATGTCACGAGGAGAGTTTGGCGCACAAGTTGGCGTTCCAAGGCTTCTGA
AATTGTTCAAAGAAAATAATATCAAAACCACCTTTTTTATTCCCGGACACACTGTAGACACCTTCCCGGAAATCAGTAAA
GCGATTTTTGATGCCGGGCATGAAATCGCTCACCATGGCTACTATCATGAAAACCCGACGCTGGTGAATCGTGATACAGA
ACGCCGACTTATGGATCTGGCGTTCGCCTGTTATAAAAGACATTTTGGCATACGCCCTGTGGGATACCGTTCTCCCTATT
GGGATTATAGCGAGAATACGCTGGATCTTCTGGAGGAAGCCGGTTTTCTCTATGACAGTAGCCTGATGGCGAGAGATCTT
GTGCCTTACCATCCTCAACGTTGGCAGGTGAATTGGGAAACGGGAAATATCGCAGGCCCGGCCAGCGCGATTCTGGAAAT
TCCTGTTAGCTGGTATCTGGATGATTTTCCCGCACTGGCGTATACCGGTAACCAGGAGGGGATGAGCGATACTGACGGTG
TTCTGCGACGCTGGAAGGATATTTTTACCTATGCTTATAACCATCAGGAAAACGGTTTATATGCGATGGCTCTTCATCCG
CAGATAATCGGTCATGGGCATCATATGATGATGTTGTCACGTTTGATTGAACATATTAAAGGGCATGATGGCGTATGGTT
TGCAACCTGTGAAGAGATAGCCAGTGTCTGGGTGGATGACGAAGAGGATCGACAAAAAATGCTCCGTCCTGATGTTCGTG
GCGTAGCGCCGGTTCCGGATGATTATGGCTGGCCAGGCAAATGA

Upstream 100 bases:

>100_bases
CGTTCAAGGACAGACGCAGAAAAGCAGGCATATATAATATCTGGCCATCACACATTAAATAACAGAATGTGTCCCTTCTA
TGTATTAGCTGGAGGTCGTT

Downstream 100 bases:

>100_bases
TATCACCTCATGACAATGTTAATATCAGTCGGGTAACGGATTACCCGGGCAGAAGTTACCTGTTTGCCCGCTTGTTAATG
CATATTGTCCATCAGAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Polysaccharide Deacetylase Family Protein; Urate Catabolism Protein; Xylanase/Chitin Deacetylase; Chitin Deacetylase; Polysaccharide Deacetylase Family; Polysaccharide Deacetylase Domain Protein; Chitooligosaccharide Deacetylase; Hydrolase; Chitooligosaccharide Deacetylase Protein; Saccharide Deacetylase Slightly; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Cyclic Imide Hydrolase; Polysaccharide Deacetylase Domain-Containing Protein; PEP-CTERM Locus Polysaccharide Deactylase; Deacetylase

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MGYLKLPEGKRIAVNLGVDVDAQSLWLGGFNRPSPSFMSRGEFGAQVGVPRLLKLFKENNIKTTFFIPGHTVDTFPEISK
AIFDAGHEIAHHGYYHENPTLVNRDTERRLMDLAFACYKRHFGIRPVGYRSPYWDYSENTLDLLEEAGFLYDSSLMARDL
VPYHPQRWQVNWETGNIAGPASAILEIPVSWYLDDFPALAYTGNQEGMSDTDGVLRRWKDIFTYAYNHQENGLYAMALHP
QIIGHGHHMMMLSRLIEHIKGHDGVWFATCEEIASVWVDDEEDRQKMLRPDVRGVAPVPDDYGWPGK

Sequences:

>Translated_307_residues
MGYLKLPEGKRIAVNLGVDVDAQSLWLGGFNRPSPSFMSRGEFGAQVGVPRLLKLFKENNIKTTFFIPGHTVDTFPEISK
AIFDAGHEIAHHGYYHENPTLVNRDTERRLMDLAFACYKRHFGIRPVGYRSPYWDYSENTLDLLEEAGFLYDSSLMARDL
VPYHPQRWQVNWETGNIAGPASAILEIPVSWYLDDFPALAYTGNQEGMSDTDGVLRRWKDIFTYAYNHQENGLYAMALHP
QIIGHGHHMMMLSRLIEHIKGHDGVWFATCEEIASVWVDDEEDRQKMLRPDVRGVAPVPDDYGWPGK
>Mature_306_residues
GYLKLPEGKRIAVNLGVDVDAQSLWLGGFNRPSPSFMSRGEFGAQVGVPRLLKLFKENNIKTTFFIPGHTVDTFPEISKA
IFDAGHEIAHHGYYHENPTLVNRDTERRLMDLAFACYKRHFGIRPVGYRSPYWDYSENTLDLLEEAGFLYDSSLMARDLV
PYHPQRWQVNWETGNIAGPASAILEIPVSWYLDDFPALAYTGNQEGMSDTDGVLRRWKDIFTYAYNHQENGLYAMALHPQ
IIGHGHHMMMLSRLIEHIKGHDGVWFATCEEIASVWVDDEEDRQKMLRPDVRGVAPVPDDYGWPGK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35089; Mature: 34958

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYLKLPEGKRIAVNLGVDVDAQSLWLGGFNRPSPSFMSRGEFGAQVGVPRLLKLFKENN
CCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCC
IKTTFFIPGHTVDTFPEISKAIFDAGHEIAHHGYYHENPTLVNRDTERRLMDLAFACYKR
CEEEEEECCCCCHHHHHHHHHHHHCCHHHHHCCEECCCCEEECCCHHHHHHHHHHHHHHH
HFGIRPVGYRSPYWDYSENTLDLLEEAGFLYDSSLMARDLVPYHPQRWQVNWETGNIAGP
HCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCCH
ASAILEIPVSWYLDDFPALAYTGNQEGMSDTDGVLRRWKDIFTYAYNHQENGLYAMALHP
HHHHHHCCHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEEECC
QIIGHGHHMMMLSRLIEHIKGHDGVWFATCEEIASVWVDDEEDRQKMLRPDVRGVAPVPD
HHHCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCC
DYGWPGK
CCCCCCC
>Mature Secondary Structure 
GYLKLPEGKRIAVNLGVDVDAQSLWLGGFNRPSPSFMSRGEFGAQVGVPRLLKLFKENN
CCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCC
IKTTFFIPGHTVDTFPEISKAIFDAGHEIAHHGYYHENPTLVNRDTERRLMDLAFACYKR
CEEEEEECCCCCHHHHHHHHHHHHCCHHHHHCCEECCCCEEECCCHHHHHHHHHHHHHHH
HFGIRPVGYRSPYWDYSENTLDLLEEAGFLYDSSLMARDLVPYHPQRWQVNWETGNIAGP
HCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCCH
ASAILEIPVSWYLDDFPALAYTGNQEGMSDTDGVLRRWKDIFTYAYNHQENGLYAMALHP
HHHHHHCCHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEEECC
QIIGHGHHMMMLSRLIEHIKGHDGVWFATCEEIASVWVDDEEDRQKMLRPDVRGVAPVPD
HHHCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCC
DYGWPGK
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA