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The map label for this gene is sprT

Identifier: 29143354

GI number: 29143354

Start: 3095992

End: 3096489

Strand: Direct

Name: sprT

Synonym: t3004

Alternate gene names: 29143354

Gene position: 3095992-3096489 (Clockwise)

Preceding gene: 29143353

Following gene: 29143355

Centisome position: 64.61

GC content: 57.83

Gene sequence:

>498_bases
ATGAAAACCCCTCGTCTCCCTATCGCTATCCAGCAGGCCGTGATGCGCCGTCTGCGGGAAAATCTCGCCCAGGCGAACCT
CAAGCTCGATAGACATTATCCGGAGCCGAAACTGGTGTATACGCAACGCGGCACCTCGGCGGGCACCGCCTGGCTGGAGA
GCTACGAAATCCGCCTCAACCCGGTGTTACTGCTGGAAAACATCGACACCTTTATTGCAGAGGTCGTGCCGCATGAACTG
GCGCATCTGTTGGTGTGGAAGCACTTCGGACGCAAGGCTCCGCATGGCAAGGAATGGAAGTGGATGATGGAAAGCGTGCT
GGGCGTTCCGGCCAGACGTACTCATCAATTTGCGCTGCAATCCGTACGGCGCAATACCTTTCCCTACCATTGCCAATGCC
AGCAACATCAACTCACCGTCCGCCGTCATAACCGTGTGGTACGCGGCGAAGCGGTTTATCGTTGCGTTCACTGCGGCGAA
CCACTGGTCGCCGGGTAG

Upstream 100 bases:

>100_bases
CGAAATCGGCGCCCACGACTAATCCCTCCACGCTTCCTCCTGCCACAGGAGGAAGCGTTTTTCTTGCAGTCCCTCTTCCG
TCGCACTATTCTCTGCCGCT

Downstream 100 bases:

>100_bases
TTCCCCGAAACGTCCGGGAACTTTCCTGAGCGGACTGATTGCATACAGACACAACTTTCGCTACGTTGCGGGCTCGTTTT
GCTATGGAGTGTGCAATGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKTPRLPIAIQQAVMRRLRENLAQANLKLDRHYPEPKLVYTQRGTSAGTAWLESYEIRLNPVLLLENIDTFIAEVVPHEL
AHLLVWKHFGRKAPHGKEWKWMMESVLGVPARRTHQFALQSVRRNTFPYHCQCQQHQLTVRRHNRVVRGEAVYRCVHCGE
PLVAG

Sequences:

>Translated_165_residues
MKTPRLPIAIQQAVMRRLRENLAQANLKLDRHYPEPKLVYTQRGTSAGTAWLESYEIRLNPVLLLENIDTFIAEVVPHEL
AHLLVWKHFGRKAPHGKEWKWMMESVLGVPARRTHQFALQSVRRNTFPYHCQCQQHQLTVRRHNRVVRGEAVYRCVHCGE
PLVAG
>Mature_165_residues
MKTPRLPIAIQQAVMRRLRENLAQANLKLDRHYPEPKLVYTQRGTSAGTAWLESYEIRLNPVLLLENIDTFIAEVVPHEL
AHLLVWKHFGRKAPHGKEWKWMMESVLGVPARRTHQFALQSVRRNTFPYHCQCQQHQLTVRRHNRVVRGEAVYRCVHCGE
PLVAG

Specific function: Involved In Bola Gene Expression At The Stationary Phase. [C]

COG id: COG3091

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sprT family

Homologues:

Organism=Escherichia coli, GI1789313, Length=164, Percent_Identity=90.2439024390244, Blast_Score=307, Evalue=3e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SPRT_SALA4 (B5F5L7)

Other databases:

- EMBL:   CP001138
- RefSeq:   YP_002148006.1
- GeneID:   6794400
- GenomeReviews:   CP001138_GR
- KEGG:   sea:SeAg_B3255
- HOGENOM:   HBG495224
- OMA:   IMRGVYE
- ProtClustDB:   PRK04860
- GO:   GO:0005737
- HAMAP:   MF_00746
- InterPro:   IPR006640
- SMART:   SM00731

Pfam domain/function: PF10263 SprT-like

EC number: NA

Molecular weight: Translated: 19244; Mature: 19244

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: ACT_SITE 79-79

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTPRLPIAIQQAVMRRLRENLAQANLKLDRHYPEPKLVYTQRGTSAGTAWLESYEIRLN
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHEEEECC
PVLLLENIDTFIAEVVPHELAHLLVWKHFGRKAPHGKEWKWMMESVLGVPARRTHQFALQ
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
SVRRNTFPYHCQCQQHQLTVRRHNRVVRGEAVYRCVHCGEPLVAG
HHHHCCCCCEEECHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKTPRLPIAIQQAVMRRLRENLAQANLKLDRHYPEPKLVYTQRGTSAGTAWLESYEIRLN
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHEEEECC
PVLLLENIDTFIAEVVPHELAHLLVWKHFGRKAPHGKEWKWMMESVLGVPARRTHQFALQ
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
SVRRNTFPYHCQCQQHQLTVRRHNRVVRGEAVYRCVHCGEPLVAG
HHHHCCCCCEEECHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA