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The map label for this gene is ygeA [H]

Identifier: 29143277

GI number: 29143277

Start: 3017833

End: 3018540

Strand: Reverse

Name: ygeA [H]

Synonym: t2925

Alternate gene names: 29143277

Gene position: 3018540-3017833 (Counterclockwise)

Preceding gene: 29143278

Following gene: 29143275

Centisome position: 62.99

GC content: 53.81

Gene sequence:

>708_bases
GTGAAAACGATCGGGCTGTTGGGGGGGATGAGCTGGGAATCGACTATCCCTTATTACCGTTTAATCAATGAAGGCATTAA
ACAGCAGCTGGGAGGCCTGCACTCGGCGAGCTTACTGCTGCATAGCGTAGATTTCCACGATATTGAAGTATGTCAACGCC
GCGGCGAATGGGATAAAGCGGGCGATATCCTGGCGCAGGCCGCGCAGGGGTTACAGCAGGCGGGCGCAGAAGGTATTGTG
CTGTGTACCAACACCATGCATAAAATCGCGCACATTATTGAATCTCGTTGTTCTCTGCCTTTCCTACACATCGCGGATGC
TACCGGGCGAGCCATCGCCCGTCAGGGGTTGCATCGCGTGGCGCTATTAGGGACTCGCTATACGATGGAGCAGGATTTTT
ATCGCGGGCGGCTGGAACAGCAATTTGCGATTGAGACCATCGTGCCGGAGGCGGACGATCGGGCGCGTATCAATCAGGTG
ATTTTTGACGAGCTCTGTCAGGGGATATTCACTGACGCGTCGCGCCACTATTATTTACAGGTTATCGAACAACTGGCTGC
GCAAGGCGCGCAGGGCGTTATTTTTGGCTGTACTGAAATAGGTTTGCTTGTTCCCCAGACGCAAAGCGCGCTACCGGTTT
TCGATACCACGGCAATTCATGCCGCAGATGCCGTGAGCTTTATGCTTTCGTCATCGGCCCCAGAATAA

Upstream 100 bases:

>100_bases
TGCCGGATGACGCCTGTTATCCGGCATGATGAAAAATAGACTGGAAACGGATGTGTAAGTTTGTTTCACTGCCATAATGC
TTTACAAAAAGGAGAGCGCA

Downstream 100 bases:

>100_bases
CCTCCAGCGGTTCGACCAGGCGCGAAAGATGCGTTTGTAAATGCTTACTGAAGGCGTCAACCAGCGCGGAGGCGGGGCGG
TGTAGCGGGCGAATCAGGCT

Product: racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKTIGLLGGMSWESTIPYYRLINEGIKQQLGGLHSASLLLHSVDFHDIEVCQRRGEWDKAGDILAQAAQGLQQAGAEGIV
LCTNTMHKIAHIIESRCSLPFLHIADATGRAIARQGLHRVALLGTRYTMEQDFYRGRLEQQFAIETIVPEADDRARINQV
IFDELCQGIFTDASRHYYLQVIEQLAAQGAQGVIFGCTEIGLLVPQTQSALPVFDTTAIHAADAVSFMLSSSAPE

Sequences:

>Translated_235_residues
MKTIGLLGGMSWESTIPYYRLINEGIKQQLGGLHSASLLLHSVDFHDIEVCQRRGEWDKAGDILAQAAQGLQQAGAEGIV
LCTNTMHKIAHIIESRCSLPFLHIADATGRAIARQGLHRVALLGTRYTMEQDFYRGRLEQQFAIETIVPEADDRARINQV
IFDELCQGIFTDASRHYYLQVIEQLAAQGAQGVIFGCTEIGLLVPQTQSALPVFDTTAIHAADAVSFMLSSSAPE
>Mature_235_residues
MKTIGLLGGMSWESTIPYYRLINEGIKQQLGGLHSASLLLHSVDFHDIEVCQRRGEWDKAGDILAQAAQGLQQAGAEGIV
LCTNTMHKIAHIIESRCSLPFLHIADATGRAIARQGLHRVALLGTRYTMEQDFYRGRLEQQFAIETIVPEADDRARINQV
IFDELCQGIFTDASRHYYLQVIEQLAAQGAQGVIFGCTEIGLLVPQTQSALPVFDTTAIHAADAVSFMLSSSAPE

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=230, Percent_Identity=80.4347826086957, Blast_Score=389, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: NA

Molecular weight: Translated: 25810; Mature: 25810

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIGLLGGMSWESTIPYYRLINEGIKQQLGGLHSASLLLHSVDFHDIEVCQRRGEWDKA
CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCHH
GDILAQAAQGLQQAGAEGIVLCTNTMHKIAHIIESRCSLPFLHIADATGRAIARQGLHRV
HHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH
ALLGTRYTMEQDFYRGRLEQQFAIETIVPEADDRARINQVIFDELCQGIFTDASRHYYLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
VIEQLAAQGAQGVIFGCTEIGLLVPQTQSALPVFDTTAIHAADAVSFMLSSSAPE
HHHHHHHCCCCCEEEEHHHHCEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKTIGLLGGMSWESTIPYYRLINEGIKQQLGGLHSASLLLHSVDFHDIEVCQRRGEWDKA
CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCHH
GDILAQAAQGLQQAGAEGIVLCTNTMHKIAHIIESRCSLPFLHIADATGRAIARQGLHRV
HHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH
ALLGTRYTMEQDFYRGRLEQQFAIETIVPEADDRARINQVIFDELCQGIFTDASRHYYLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
VIEQLAAQGAQGVIFGCTEIGLLVPQTQSALPVFDTTAIHAADAVSFMLSSSAPE
HHHHHHHCCCCCEEEEHHHHCEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]