Click here to switch to the map view.

The map label for this gene is yqcC [H]

Identifier: 29143228

GI number: 29143228

Start: 2957760

End: 2958089

Strand: Reverse

Name: yqcC [H]

Synonym: t2874

Alternate gene names: 29143228

Gene position: 2958089-2957760 (Counterclockwise)

Preceding gene: 29143229

Following gene: 29143227

Centisome position: 61.73

GC content: 56.67

Gene sequence:

>330_bases
ATGACGACTCATGACCGTGTGCGTCAGCAGTTACATGCGCTTGAAACGCTGCTGCGCGAGCATCGCCACTGGCGGCTGGA
TGCGCCGCAGGCGCATTTGTTTACCAGCACCCAACCATTTTTTATGGATACCATGGAACCGCTGGAATGGCTGCAATGGG
TATTGATCCCACGTATGCATACCCTACTTGATAATGCGCAGCCGCTGCCCGAGGCGTTTGCCGTCGCCCCTTATTATGAA
ATGGCGCTGGCGGCGGATCATCCGCAGCGGGAGGCGATCCTGGCGGTTTTGCAGGATCTGGATGCGCTATTCGTCCGCGA
TAAATCCTGA

Upstream 100 bases:

>100_bases
AGTAGCTGGAATGCTGCGAAACGAACCGGGAGCACTGTTTATACAGTGCTCCCTTTTTTTGTTATTCTTCGCGCCAGATT
TTCATCATTGAGGTTTTAAC

Downstream 100 bases:

>100_bases
TGCTGGAGATCCTCTATCAAGACCCGTGGCTGGTTGCCGTGAATAAACCCGCAGGCTGGCTTGTTCACCGGAGCTGGCTG
GATCGCGACGAAAAAGTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MTTHDRVRQQLHALETLLREHRHWRLDAPQAHLFTSTQPFFMDTMEPLEWLQWVLIPRMHTLLDNAQPLPEAFAVAPYYE
MALAADHPQREAILAVLQDLDALFVRDKS

Sequences:

>Translated_109_residues
MTTHDRVRQQLHALETLLREHRHWRLDAPQAHLFTSTQPFFMDTMEPLEWLQWVLIPRMHTLLDNAQPLPEAFAVAPYYE
MALAADHPQREAILAVLQDLDALFVRDKS
>Mature_108_residues
TTHDRVRQQLHALETLLREHRHWRLDAPQAHLFTSTQPFFMDTMEPLEWLQWVLIPRMHTLLDNAQPLPEAFAVAPYYEM
ALAADHPQREAILAVLQDLDALFVRDKS

Specific function: Unknown

COG id: COG3098

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1436 [H]

Homologues:

Organism=Escherichia coli, GI1789156, Length=109, Percent_Identity=80.7339449541284, Blast_Score=162, Evalue=6e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007384 [H]

Pfam domain/function: PF04287 DUF446 [H]

EC number: NA

Molecular weight: Translated: 12825; Mature: 12694

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTHDRVRQQLHALETLLREHRHWRLDAPQAHLFTSTQPFFMDTMEPLEWLQWVLIPRMH
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
TLLDNAQPLPEAFAVAPYYEMALAADHPQREAILAVLQDLDALFVRDKS
HHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTHDRVRQQLHALETLLREHRHWRLDAPQAHLFTSTQPFFMDTMEPLEWLQWVLIPRMH
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
TLLDNAQPLPEAFAVAPYYEMALAADHPQREAILAVLQDLDALFVRDKS
HHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]